Click here to switch to the map view.

The map label for this gene is 119943870

Identifier: 119943870

GI number: 119943870

Start: 103658

End: 104740

Strand: Reverse

Name: 119943870

Synonym: Ping_0077

Alternate gene names: NA

Gene position: 104740-103658 (Counterclockwise)

Preceding gene: 119943876

Following gene: 119943869

Centisome position: 2.3

GC content: 39.15

Gene sequence:

>1083_bases
ATGAAATTAAACCTAATTACAGCTTTCTTGATAGGTATTGTGGTTTCTGTTGTGGCAATCGCCGACACCCTTACTCTAAA
AGATAATCACCCCGAAACCTATGAAGTTGTTAAAGGAGATACTTTATGGGATATTTCTGCTCATTTTTTAAACTCCCCCT
GGTTGTGGCCACGTTTATGGCAAAAAAACAGTCAAATTAAAAATCCCGACCTCATTTATCCCGGTGATATATTAACCTTG
ATTTGGGTTGATGGAGAGCCTCAACTTTCCCGTAAGATATTAAAAAAATTATCACCAACACCAAGATTACAGGAAAAACA
GGCAGCCATCCCAACGATTCCCTTAGCTTCTATCTCCTCTTTTTTATCAAGAGACCATATCATTGATCCGGCGTTATTGA
CTGGTGCACCTCGTTTACTCGGCGATGGAAAGGCAACTCCTCGTTTCTTTGAAGGAGATATCTTTTATGGGCAGGGACAA
TACGATAAAGGTAAGTTGTATGGTGTTTATCGTTTAGGTGAAGACTATATAGATTCTGTCAGTAAAGAATTTTTAGGCAA
GCAACTGATTTTTATTGGCCTCTCAGAAGTCTCTAAAAACCCAAATGTTAGCGGCACCGAGCAGGTCACTCCGCATGATT
TTATAAGCAGCTCAAGGGAAGCCCGTCAGGGGGATTTAATATTACCCATTCCGGAATATGAAACACTGCCAGCCTATTTT
TTGCCCCAATCAGTTCCAAAAACAATGCAAGGTCAGATTATTGCTGCACTTAACAATTCAAAAGCAGCTGGTAAGTGGGA
TATTGTGGTGATCAACAAAGGTCAGCGAGATAATGTTCAAATAGGCTCTATGTTTTCTATTTTAAGGTCGGGACCGGGTA
TTTTAATTAATAAAAATAGCGTTGTTTATCAAAAGTATGCTTCAAAACTTGACCAAATAGGAAGCCCTGATATTAAAATA
CCCGCAGAGCGTATTGGTGAACTATTGGTATTTAGAGTCTATGATAAAGTAAGTATCGCTATGATAATGCGCAGCACCGA
GGTAATAGCCCCAAATTATAAAATACAAGGCCTAGCGTTTTAG

Upstream 100 bases:

>100_bases
ATGATATTATCTAATCCTATTGGTTAGTATTAAAGAGTTCTAATTCTAGTCATTTCCGAATATAAAAAAAAGTCTTATTA
GTCATCAGACAAGGATTGTT

Downstream 100 bases:

>100_bases
TTCTTTAATATCATGTTACTATCTAACCCGATTAATTTTAGGGTCAGATAGTAACAAGGCAGGTAACTATTCAATTTAAC
TTATTTTCACCACAAAATAA

Product: peptidoglycan-binding LysM

Products: NA

Alternate protein names: LysM Domain Protein; Cell Wall Degradation; LysM Motif-Containing Protein; Protein Containing LysM Domain; Signal Peptide Protein; LysM Family Cell Wall Degradation Protein; Lysin Domain-Containing Protein; Signal Peptide Protein LysM Domain Protein; Secreted Protein

Number of amino acids: Translated: 360; Mature: 360

Protein sequence:

>360_residues
MKLNLITAFLIGIVVSVVAIADTLTLKDNHPETYEVVKGDTLWDISAHFLNSPWLWPRLWQKNSQIKNPDLIYPGDILTL
IWVDGEPQLSRKILKKLSPTPRLQEKQAAIPTIPLASISSFLSRDHIIDPALLTGAPRLLGDGKATPRFFEGDIFYGQGQ
YDKGKLYGVYRLGEDYIDSVSKEFLGKQLIFIGLSEVSKNPNVSGTEQVTPHDFISSSREARQGDLILPIPEYETLPAYF
LPQSVPKTMQGQIIAALNNSKAAGKWDIVVINKGQRDNVQIGSMFSILRSGPGILINKNSVVYQKYASKLDQIGSPDIKI
PAERIGELLVFRVYDKVSIAMIMRSTEVIAPNYKIQGLAF

Sequences:

>Translated_360_residues
MKLNLITAFLIGIVVSVVAIADTLTLKDNHPETYEVVKGDTLWDISAHFLNSPWLWPRLWQKNSQIKNPDLIYPGDILTL
IWVDGEPQLSRKILKKLSPTPRLQEKQAAIPTIPLASISSFLSRDHIIDPALLTGAPRLLGDGKATPRFFEGDIFYGQGQ
YDKGKLYGVYRLGEDYIDSVSKEFLGKQLIFIGLSEVSKNPNVSGTEQVTPHDFISSSREARQGDLILPIPEYETLPAYF
LPQSVPKTMQGQIIAALNNSKAAGKWDIVVINKGQRDNVQIGSMFSILRSGPGILINKNSVVYQKYASKLDQIGSPDIKI
PAERIGELLVFRVYDKVSIAMIMRSTEVIAPNYKIQGLAF
>Mature_360_residues
MKLNLITAFLIGIVVSVVAIADTLTLKDNHPETYEVVKGDTLWDISAHFLNSPWLWPRLWQKNSQIKNPDLIYPGDILTL
IWVDGEPQLSRKILKKLSPTPRLQEKQAAIPTIPLASISSFLSRDHIIDPALLTGAPRLLGDGKATPRFFEGDIFYGQGQ
YDKGKLYGVYRLGEDYIDSVSKEFLGKQLIFIGLSEVSKNPNVSGTEQVTPHDFISSSREARQGDLILPIPEYETLPAYF
LPQSVPKTMQGQIIAALNNSKAAGKWDIVVINKGQRDNVQIGSMFSILRSGPGILINKNSVVYQKYASKLDQIGSPDIKI
PAERIGELLVFRVYDKVSIAMIMRSTEVIAPNYKIQGLAF

Specific function: Unknown

COG id: COG1652

COG function: function code S; Uncharacterized protein containing LysM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40066; Mature: 40066

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLNLITAFLIGIVVSVVAIADTLTLKDNHPETYEVVKGDTLWDISAHFLNSPWLWPRLW
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCEEEECHHHHCCCCCCCHHHH
QKNSQIKNPDLIYPGDILTLIWVDGEPQLSRKILKKLSPTPRLQEKQAAIPTIPLASISS
CCCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH
FLSRDHIIDPALLTGAPRLLGDGKATPRFFEGDIFYGQGQYDKGKLYGVYRLGEDYIDSV
HHHHCCCCCCHHHCCCCHHCCCCCCCCCEEECEEEECCCCCCCCCEEEEEECCHHHHHHH
SKEFLGKQLIFIGLSEVSKNPNVSGTEQVTPHDFISSSREARQGDLILPIPEYETLPAYF
HHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHH
LPQSVPKTMQGQIIAALNNSKAAGKWDIVVINKGQRDNVQIGSMFSILRSGPGILINKNS
CCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHCCCCEEEECCC
VVYQKYASKLDQIGSPDIKIPAERIGELLVFRVYDKVSIAMIMRSTEVIAPNYKIQGLAF
HHHHHHHHHHHHCCCCCCCCCHHHHHHEEEHHHHHHHEEEHHHHCCEEECCCCEEEEECC
>Mature Secondary Structure
MKLNLITAFLIGIVVSVVAIADTLTLKDNHPETYEVVKGDTLWDISAHFLNSPWLWPRLW
CCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCEEEECHHHHCCCCCCCHHHH
QKNSQIKNPDLIYPGDILTLIWVDGEPQLSRKILKKLSPTPRLQEKQAAIPTIPLASISS
CCCCCCCCCCEEECCCEEEEEEECCCHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHH
FLSRDHIIDPALLTGAPRLLGDGKATPRFFEGDIFYGQGQYDKGKLYGVYRLGEDYIDSV
HHHHCCCCCCHHHCCCCHHCCCCCCCCCEEECEEEECCCCCCCCCEEEEEECCHHHHHHH
SKEFLGKQLIFIGLSEVSKNPNVSGTEQVTPHDFISSSREARQGDLILPIPEYETLPAYF
HHHHHCCEEEEEEHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHH
LPQSVPKTMQGQIIAALNNSKAAGKWDIVVINKGQRDNVQIGSMFSILRSGPGILINKNS
CCCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCCCCEEHHHHHHHHHCCCCEEEECCC
VVYQKYASKLDQIGSPDIKIPAERIGELLVFRVYDKVSIAMIMRSTEVIAPNYKIQGLAF
HHHHHHHHHHHHCCCCCCCCCHHHHHHEEEHHHHHHHEEEHHHHCCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA