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The map label for this gene is smf [H]

Identifier: 119943869

GI number: 119943869

Start: 102477

End: 103535

Strand: Reverse

Name: smf [H]

Synonym: Ping_0076

Alternate gene names: 119943869

Gene position: 103535-102477 (Counterclockwise)

Preceding gene: 119943870

Following gene: 119943868

Centisome position: 2.27

GC content: 40.6

Gene sequence:

>1059_bases
ATGGTTTTAGATGCCATCCCAACGCTTCATAAACGCACGCTATTAAAACTGCTGACTTATCATTCAATTGAACAGTTATT
ACAGTTATCTCGAAATCAACTGCAAGCCTACGGATTAAAAGACAATCAAATAGCAGCGCTGCTTAAACCGAATCTAAAAT
TAATTGAAAGTAACCTGTCCTGGTTAGATAACTCACCAGAAAATCATATTATTTGTTACGACAGCCCACATTACCCGCAA
TTATTAAGGGAAATAAGCAGCCCCCCATTATTACTTTATTTACAAGGCAATATTGGTTTATTAAGCACCCCTCAAATTGC
GATAGTAGGGAGTCGTAACTGTACCCCCTACGGGCAAGAAAAGGCTTATCAATTCGCACAGCAATTAAGTACTTCAGGTT
TTACCATTACCAGTGGTTTAGCCATTGGCATTGATGGGCTTGCGCATCAAGGAGCTATTGACAAACAGGGTCATACTGTT
GCTGTATTAGGTACCGGATTAAATAACATTTATCCAAAGCGGCATCTTAAACTTGCACAGCAAATAAAAGAAAAGGGGTT
GTTGGTATCAGAGTTTTGGCCAAACGCAGCTGCCTTTCCTGCTAATTTCCCCAGACGGAATCGCATTATTTCAGGTTTAA
GTTTAGGCGTGTTAGTGATTGAGGCTTCAAAACGTAGCGGATCATTAATCACTGCACGCTATGCATTAGAGCAAAATCGG
GATGTCTTTGCCCTGCCCGGTTCAATTGATAATGCAGAGGCCTGGGGCTGCCATCAACTGATTCAACAGGGTGCAAAACT
GGTCATGAATACTCAGGATATATGTGATGAATTTAGCCACTTATGTGACCCATTTTCAAGCAGTGATGGAGAAACAACAT
CCCTTGCCACACCTTGCCACCCTCTCTTAAAGCATATTGATTTTCACCTCACTACCCTTGAGCAATTATTGAATCGTAGC
GGTTTCGATGTAGCGACCTTACAAAATCAGTTAATAGAACTTGAGATAACTGGTAGAATAACAGTCACAACCCAAGGTTA
TATAAAGTTAAGCAATTAG

Upstream 100 bases:

>100_bases
CTAACCCGATTAATTTTAGGGTCAGATAGTAACAAGGCAGGTAACTATTCAATTTAACTTATTTTCACCACAAAATAATG
AACATAATAGTCGCTATTGG

Downstream 100 bases:

>100_bases
ATGCGGTTGTCATTTTATCACCAACATTAAAAAACAAGGTTAAATATGTTTGAAATAATAATGTATCTTTTTGAAAGCTA
TATGCAAATTGATCAAAGCA

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MVLDAIPTLHKRTLLKLLTYHSIEQLLQLSRNQLQAYGLKDNQIAALLKPNLKLIESNLSWLDNSPENHIICYDSPHYPQ
LLREISSPPLLLYLQGNIGLLSTPQIAIVGSRNCTPYGQEKAYQFAQQLSTSGFTITSGLAIGIDGLAHQGAIDKQGHTV
AVLGTGLNNIYPKRHLKLAQQIKEKGLLVSEFWPNAAAFPANFPRRNRIISGLSLGVLVIEASKRSGSLITARYALEQNR
DVFALPGSIDNAEAWGCHQLIQQGAKLVMNTQDICDEFSHLCDPFSSSDGETTSLATPCHPLLKHIDFHLTTLEQLLNRS
GFDVATLQNQLIELEITGRITVTTQGYIKLSN

Sequences:

>Translated_352_residues
MVLDAIPTLHKRTLLKLLTYHSIEQLLQLSRNQLQAYGLKDNQIAALLKPNLKLIESNLSWLDNSPENHIICYDSPHYPQ
LLREISSPPLLLYLQGNIGLLSTPQIAIVGSRNCTPYGQEKAYQFAQQLSTSGFTITSGLAIGIDGLAHQGAIDKQGHTV
AVLGTGLNNIYPKRHLKLAQQIKEKGLLVSEFWPNAAAFPANFPRRNRIISGLSLGVLVIEASKRSGSLITARYALEQNR
DVFALPGSIDNAEAWGCHQLIQQGAKLVMNTQDICDEFSHLCDPFSSSDGETTSLATPCHPLLKHIDFHLTTLEQLLNRS
GFDVATLQNQLIELEITGRITVTTQGYIKLSN
>Mature_352_residues
MVLDAIPTLHKRTLLKLLTYHSIEQLLQLSRNQLQAYGLKDNQIAALLKPNLKLIESNLSWLDNSPENHIICYDSPHYPQ
LLREISSPPLLLYLQGNIGLLSTPQIAIVGSRNCTPYGQEKAYQFAQQLSTSGFTITSGLAIGIDGLAHQGAIDKQGHTV
AVLGTGLNNIYPKRHLKLAQQIKEKGLLVSEFWPNAAAFPANFPRRNRIISGLSLGVLVIEASKRSGSLITARYALEQNR
DVFALPGSIDNAEAWGCHQLIQQGAKLVMNTQDICDEFSHLCDPFSSSDGETTSLATPCHPLLKHIDFHLTTLEQLLNRS
GFDVATLQNQLIELEITGRITVTTQGYIKLSN

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=357, Percent_Identity=41.7366946778711, Blast_Score=237, Evalue=1e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 38822; Mature: 38822

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLDAIPTLHKRTLLKLLTYHSIEQLLQLSRNQLQAYGLKDNQIAALLKPNLKLIESNLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHH
WLDNSPENHIICYDSPHYPQLLREISSPPLLLYLQGNIGLLSTPQIAIVGSRNCTPYGQE
HCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCEECCCCEEEEECCCCCCCCHH
KAYQFAQQLSTSGFTITSGLAIGIDGLAHQGAIDKQGHTVAVLGTGLNNIYPKRHLKLAQ
HHHHHHHHHCCCCCEEECCCEECCCCHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH
QIKEKGLLVSEFWPNAAAFPANFPRRNRIISGLSLGVLVIEASKRSGSLITARYALEQNR
HHHHCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCCCCEEEEEEHHHCCC
DVFALPGSIDNAEAWGCHQLIQQGAKLVMNTQDICDEFSHLCDPFSSSDGETTSLATPCH
CEEEECCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
PLLKHIDFHLTTLEQLLNRSGFDVATLQNQLIELEITGRITVTTQGYIKLSN
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECEEEEEEECEEEECC
>Mature Secondary Structure
MVLDAIPTLHKRTLLKLLTYHSIEQLLQLSRNQLQAYGLKDNQIAALLKPNLKLIESNLS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHCCHH
WLDNSPENHIICYDSPHYPQLLREISSPPLLLYLQGNIGLLSTPQIAIVGSRNCTPYGQE
HCCCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCEECCCCEEEEECCCCCCCCHH
KAYQFAQQLSTSGFTITSGLAIGIDGLAHQGAIDKQGHTVAVLGTGLNNIYPKRHLKLAQ
HHHHHHHHHCCCCCEEECCCEECCCCHHCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHH
QIKEKGLLVSEFWPNAAAFPANFPRRNRIISGLSLGVLVIEASKRSGSLITARYALEQNR
HHHHCCCEEEECCCCCCCCCCCCCHHHHHHCCCEEEEEEEEECCCCCCEEEEEEHHHCCC
DVFALPGSIDNAEAWGCHQLIQQGAKLVMNTQDICDEFSHLCDPFSSSDGETTSLATPCH
CEEEECCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
PLLKHIDFHLTTLEQLLNRSGFDVATLQNQLIELEITGRITVTTQGYIKLSN
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEEEEEEECEEEEEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]