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The map label for this gene is emrB [C]

Identifier: 119943829

GI number: 119943829

Start: 51362

End: 53788

Strand: Direct

Name: emrB [C]

Synonym: Ping_0035

Alternate gene names: 119943829

Gene position: 51362-53788 (Clockwise)

Preceding gene: 119943828

Following gene: 119943830

Centisome position: 1.13

GC content: 32.84

Gene sequence:

>2427_bases
ATGAAAGTAACATTAAAAAAGCTAAAAATTTTTTGGGCTGCTTCAGCAATTATTGCTCTTTCGCTTACTCTTAATTTTCT
TCTCAATATGTCGTCGTTTGAGGATGTTTATAAGAGCACTTTGATTTCGAAATACAAGCAGATAAACAGAAACTTAAATA
CAAAACTAGAAGCAGCCGTTAGTTATGGTAAACCTTTATATAAATTTAGTGGAATTGATGATCTTATAAATGAAATTATA
AGCAAAGAAGAAGATGTAACAAATGTTTTTGTAACACTGAAATCAGGACAAGTTTTGTACAGTTTTGATAAAACATATAT
CGAAAAACATGTGCTAAATGAAATTATTCCCGGGGAAAAAGAGTTGAACTCCGAGGAGAAAGTAAGTGTTTTTAAAATAG
AGAATAATTACTTTCTTGCTTCACCAATTTATTATGAAAATTCTGAGATAAAAGGTTTTTTATATATAGAATTTAATACA
AAAGTAATTACCGATAAAGTAATGGTGGTGATTAAAGAGAGCATTAATTTTGTTGCTGTCGTTCTTATTATTTCAATGTG
TTTACTGCTTGCTCTTATAATGCTGCTTGATATGAAAAGCAACAGGAAAAATTTTATAGTCATAATGGCAATTATTACTG
TTTCACAGTTTTCTTATTCATATATAAATATTCAACATTTTGAAAACCGTTATCTGCTGCTTTTAAATCAGAATGTGTCA
AATTTTGCAGAGAATATTGAAGACGAGATTGTTTATTTTAATAATTTGGGGCTTCCTATTCAGAGACTGAAAGGGTTTGA
AAAGTACCTCGCAAAAGAAATTCAGGAAGTGCCTGGCTGTTTAGAGGTATACGTTACAGATAAAAATAACAACGAGCTTT
TTTATGCTGATGCAAGCGGGGATAATAGAAGCAGGTACCAGAACAAACGGGGAGAAGTTTTTTACGATAAGAATCAGGCA
AAGTATTACCAAACACTCAGGGTTGATCTTGCAGGCCAGGATAGTGGAAATATTATACTGCGATTAAATGATTCGCTTAT
CAATAAAAAAATAACAGAACAAATACTGGATGCTGTGACCATTTTTGTCATATCTCTTATTATAAGTTACAAGATTCTCC
TGCTTGTTTCAATACAGAGAAAGCAGACTTTAGATGGAAGTGAGGAGGGAAAAACCAGTCCGACTTTAGATGGAAGTGAG
CAGGAAAAAAACACTCCGAAAAAAGATACAAATGTTGTGATACAGCTTTTGGCATTTATTTTTTATTTTGGTGAAATGCT
TCCAATCTCTTTTATTCCGTTGCTGGCTGCTGATATGTACAAAACAGAATCGCTGAGTTTCCTGGGAATGTCGGAAAGTA
TGATCATAGGACTTCCTATTACTACCTATATGTTGGGAGCGGCAATTTTTGTACTTGTTATTGGTTTCTTCGCAGGAAAA
ATCTCAGAGAAGAAAATATTTGTGGGTTGCTCTTTATTTCTTGTGATCGGTGCTTTTGGTGCGGCATTCTCAAATGACAT
AGGGCTACTATCGTTCTTCAGATTTATATCAGGGCTTGGATATGGTGGAATATCAATAAATGCCACTTCATTAATTCTTC
GTATATTCAAAAAAAATGGAAATGTTGCAACAGGTTTTGGTTATTGGGCAAGCGGATATGGTGCAGCAGCAATATGTGCA
CTTCCAATCGGCGGAATCCTTGTATACAGATTTGGATTTTTTTATGCACTTGGAGTATCTGGAATTATTAGTGTAATTCT
GATGTTATTTGCAATATTCTTTATACATTTTCAACAAACAGAAAAAACTGAACCTAGAATTGAGCCTAAAACTGAAAAAA
CCAAACTTCATCTAAATATATTTAATGATCGGAATGTATTTGCAAACTTTTTTTTCAGGCTGGTTCCTTTTCACCTTGTA
TTTATAGGAATATTTCAGTTTATCATGCCGCTTACTATGAATAAGGAAGGAATATCCGAGGCAAATATTGGAAGAATTCT
GACAATATTTGGGTTGGTCTATCTGCTTATGCCCTTTGTGAGCAAATTAGTTAATAAAGTAAAAAATGATAGAATGTTTA
TTGCTTTTGGAAGTATGTTGATAGGTGTAGTACTCTTGACGCTCAAATTTTCGGATAATATTGTTGCATTTATATTTGTA
GTTGCTGGGATATCACTTGGAAGTATGATCGCTGATGCAGCAGAAGAGTCATTTATTACTTCAACAAAGAAAGCAAAAGA
GATTGGAGAAGTAAAATTTATGAGTATCTATAATTCCTATGAGAGACTTATAATGGTTTTTGCACCTTTACTCTGTAGCT
TTGCTGTAACGCAAATAGGTTTTTCAGATAGTATCTTTGTTATTGGTTTGTTCACAATGGCATCATCTGTCGCTTATTTA
TTTATAAGTAAAAAAAATCCACAATAG

Upstream 100 bases:

>100_bases
TCATGAAAATGAGTGTGGAAAGTGGCTTGAGCTATTTAGGTCGCTTATAATAAGGTAAATTTTTAATGATATTGAAGTAT
AAAGAGGGAGTTAGAGGAAA

Downstream 100 bases:

>100_bases
GTTTAATTATTATGTCAGATAGCAGAATGAAAGTAGCAGTTGTTTTTGGTGGTAAATCTACAGAGCATGATGTGTCAATT
ATTTCTGCAGGACATATACT

Product: major facilitator transporter

Products: Proton [Cytoplasm]; multidrug [Periplasm] [C]

Alternate protein names: Facilitator Transporter; Facilitator Superfamily Permease; Permease Of Facilitator Superfamily; Facilitator Superfamily Transporter; Methyl-Accepting Chemotaxis Protein

Number of amino acids: Translated: 808; Mature: 808

Protein sequence:

>808_residues
MKVTLKKLKIFWAASAIIALSLTLNFLLNMSSFEDVYKSTLISKYKQINRNLNTKLEAAVSYGKPLYKFSGIDDLINEII
SKEEDVTNVFVTLKSGQVLYSFDKTYIEKHVLNEIIPGEKELNSEEKVSVFKIENNYFLASPIYYENSEIKGFLYIEFNT
KVITDKVMVVIKESINFVAVVLIISMCLLLALIMLLDMKSNRKNFIVIMAIITVSQFSYSYINIQHFENRYLLLLNQNVS
NFAENIEDEIVYFNNLGLPIQRLKGFEKYLAKEIQEVPGCLEVYVTDKNNNELFYADASGDNRSRYQNKRGEVFYDKNQA
KYYQTLRVDLAGQDSGNIILRLNDSLINKKITEQILDAVTIFVISLIISYKILLLVSIQRKQTLDGSEEGKTSPTLDGSE
QEKNTPKKDTNVVIQLLAFIFYFGEMLPISFIPLLAADMYKTESLSFLGMSESMIIGLPITTYMLGAAIFVLVIGFFAGK
ISEKKIFVGCSLFLVIGAFGAAFSNDIGLLSFFRFISGLGYGGISINATSLILRIFKKNGNVATGFGYWASGYGAAAICA
LPIGGILVYRFGFFYALGVSGIISVILMLFAIFFIHFQQTEKTEPRIEPKTEKTKLHLNIFNDRNVFANFFFRLVPFHLV
FIGIFQFIMPLTMNKEGISEANIGRILTIFGLVYLLMPFVSKLVNKVKNDRMFIAFGSMLIGVVLLTLKFSDNIVAFIFV
VAGISLGSMIADAAEESFITSTKKAKEIGEVKFMSIYNSYERLIMVFAPLLCSFAVTQIGFSDSIFVIGLFTMASSVAYL
FISKKNPQ

Sequences:

>Translated_808_residues
MKVTLKKLKIFWAASAIIALSLTLNFLLNMSSFEDVYKSTLISKYKQINRNLNTKLEAAVSYGKPLYKFSGIDDLINEII
SKEEDVTNVFVTLKSGQVLYSFDKTYIEKHVLNEIIPGEKELNSEEKVSVFKIENNYFLASPIYYENSEIKGFLYIEFNT
KVITDKVMVVIKESINFVAVVLIISMCLLLALIMLLDMKSNRKNFIVIMAIITVSQFSYSYINIQHFENRYLLLLNQNVS
NFAENIEDEIVYFNNLGLPIQRLKGFEKYLAKEIQEVPGCLEVYVTDKNNNELFYADASGDNRSRYQNKRGEVFYDKNQA
KYYQTLRVDLAGQDSGNIILRLNDSLINKKITEQILDAVTIFVISLIISYKILLLVSIQRKQTLDGSEEGKTSPTLDGSE
QEKNTPKKDTNVVIQLLAFIFYFGEMLPISFIPLLAADMYKTESLSFLGMSESMIIGLPITTYMLGAAIFVLVIGFFAGK
ISEKKIFVGCSLFLVIGAFGAAFSNDIGLLSFFRFISGLGYGGISINATSLILRIFKKNGNVATGFGYWASGYGAAAICA
LPIGGILVYRFGFFYALGVSGIISVILMLFAIFFIHFQQTEKTEPRIEPKTEKTKLHLNIFNDRNVFANFFFRLVPFHLV
FIGIFQFIMPLTMNKEGISEANIGRILTIFGLVYLLMPFVSKLVNKVKNDRMFIAFGSMLIGVVLLTLKFSDNIVAFIFV
VAGISLGSMIADAAEESFITSTKKAKEIGEVKFMSIYNSYERLIMVFAPLLCSFAVTQIGFSDSIFVIGLFTMASSVAYL
FISKKNPQ
>Mature_808_residues
MKVTLKKLKIFWAASAIIALSLTLNFLLNMSSFEDVYKSTLISKYKQINRNLNTKLEAAVSYGKPLYKFSGIDDLINEII
SKEEDVTNVFVTLKSGQVLYSFDKTYIEKHVLNEIIPGEKELNSEEKVSVFKIENNYFLASPIYYENSEIKGFLYIEFNT
KVITDKVMVVIKESINFVAVVLIISMCLLLALIMLLDMKSNRKNFIVIMAIITVSQFSYSYINIQHFENRYLLLLNQNVS
NFAENIEDEIVYFNNLGLPIQRLKGFEKYLAKEIQEVPGCLEVYVTDKNNNELFYADASGDNRSRYQNKRGEVFYDKNQA
KYYQTLRVDLAGQDSGNIILRLNDSLINKKITEQILDAVTIFVISLIISYKILLLVSIQRKQTLDGSEEGKTSPTLDGSE
QEKNTPKKDTNVVIQLLAFIFYFGEMLPISFIPLLAADMYKTESLSFLGMSESMIIGLPITTYMLGAAIFVLVIGFFAGK
ISEKKIFVGCSLFLVIGAFGAAFSNDIGLLSFFRFISGLGYGGISINATSLILRIFKKNGNVATGFGYWASGYGAAAICA
LPIGGILVYRFGFFYALGVSGIISVILMLFAIFFIHFQQTEKTEPRIEPKTEKTKLHLNIFNDRNVFANFFFRLVPFHLV
FIGIFQFIMPLTMNKEGISEANIGRILTIFGLVYLLMPFVSKLVNKVKNDRMFIAFGSMLIGVVLLTLKFSDNIVAFIFV
VAGISLGSMIADAAEESFITSTKKAKEIGEVKFMSIYNSYERLIMVFAPLLCSFAVTQIGFSDSIFVIGLFTMASSVAYL
FISKKNPQ

Specific function: Translocase That Confers Resistance To Substances Of High Hydrophobicity. [C]

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90963; Mature: 90963

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTLKKLKIFWAASAIIALSLTLNFLLNMSSFEDVYKSTLISKYKQINRNLNTKLEAAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SYGKPLYKFSGIDDLINEIISKEEDVTNVFVTLKSGQVLYSFDKTYIEKHVLNEIIPGEK
HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCH
ELNSEEKVSVFKIENNYFLASPIYYENSEIKGFLYIEFNTKVITDKVMVVIKESINFVAV
HCCCCCCEEEEEEECCEEEECCEEEECCCCEEEEEEEECCEEEHHHHHHHHHHHHHHHHH
VLIISMCLLLALIMLLDMKSNRKNFIVIMAIITVSQFSYSYINIQHFENRYLLLLNQNVS
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCEEEEEEEEECCEEEEEECCCHH
NFAENIEDEIVYFNNLGLPIQRLKGFEKYLAKEIQEVPGCLEVYVTDKNNNELFYADASG
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCC
DNRSRYQNKRGEVFYDKNQAKYYQTLRVDLAGQDSGNIILRLNDSLINKKITEQILDAVT
CCHHHHHCCCCCEEEECCHHHEEEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHH
IFVISLIISYKILLLVSIQRKQTLDGSEEGKTSPTLDGSEQEKNTPKKDTNVVIQLLAFI
HHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FYFGEMLPISFIPLLAADMYKTESLSFLGMSESMIIGLPITTYMLGAAIFVLVIGFFAGK
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC
ISEKKIFVGCSLFLVIGAFGAAFSNDIGLLSFFRFISGLGYGGISINATSLILRIFKKNG
CCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCC
NVATGFGYWASGYGAAAICALPIGGILVYRFGFFYALGVSGIISVILMLFAIFFIHFQQT
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKTEPRIEPKTEKTKLHLNIFNDRNVFANFFFRLVPFHLVFIGIFQFIMPLTMNKEGISE
CCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ANIGRILTIFGLVYLLMPFVSKLVNKVKNDRMFIAFGSMLIGVVLLTLKFSDNIVAFIFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHH
VAGISLGSMIADAAEESFITSTKKAKEIGEVKFMSIYNSYERLIMVFAPLLCSFAVTQIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSDSIFVIGLFTMASSVAYLFISKKNPQ
CCCCHHHHHHHHHHCCEEEEEEECCCCC
>Mature Secondary Structure
MKVTLKKLKIFWAASAIIALSLTLNFLLNMSSFEDVYKSTLISKYKQINRNLNTKLEAAV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
SYGKPLYKFSGIDDLINEIISKEEDVTNVFVTLKSGQVLYSFDKTYIEKHVLNEIIPGEK
HCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCH
ELNSEEKVSVFKIENNYFLASPIYYENSEIKGFLYIEFNTKVITDKVMVVIKESINFVAV
HCCCCCCEEEEEEECCEEEECCEEEECCCCEEEEEEEECCEEEHHHHHHHHHHHHHHHHH
VLIISMCLLLALIMLLDMKSNRKNFIVIMAIITVSQFSYSYINIQHFENRYLLLLNQNVS
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEHHHHHCCEEEEEEEEECCEEEEEECCCHH
NFAENIEDEIVYFNNLGLPIQRLKGFEKYLAKEIQEVPGCLEVYVTDKNNNELFYADASG
HHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEECCC
DNRSRYQNKRGEVFYDKNQAKYYQTLRVDLAGQDSGNIILRLNDSLINKKITEQILDAVT
CCHHHHHCCCCCEEEECCHHHEEEEEEEEEECCCCCCEEEEECHHHHHHHHHHHHHHHHH
IFVISLIISYKILLLVSIQRKQTLDGSEEGKTSPTLDGSEQEKNTPKKDTNVVIQLLAFI
HHHHHHHHHHHHHHHEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
FYFGEMLPISFIPLLAADMYKTESLSFLGMSESMIIGLPITTYMLGAAIFVLVIGFFAGK
HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCC
ISEKKIFVGCSLFLVIGAFGAAFSNDIGLLSFFRFISGLGYGGISINATSLILRIFKKNG
CCCCEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHCCC
NVATGFGYWASGYGAAAICALPIGGILVYRFGFFYALGVSGIISVILMLFAIFFIHFQQT
CEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EKTEPRIEPKTEKTKLHLNIFNDRNVFANFFFRLVPFHLVFIGIFQFIMPLTMNKEGISE
CCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
ANIGRILTIFGLVYLLMPFVSKLVNKVKNDRMFIAFGSMLIGVVLLTLKFSDNIVAFIFV
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHCCCCCHHHHHHH
VAGISLGSMIADAAEESFITSTKKAKEIGEVKFMSIYNSYERLIMVFAPLLCSFAVTQIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FSDSIFVIGLFTMASSVAYLFISKKNPQ
CCCCHHHHHHHHHHCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; multidrug [Cytoplasm] [C]

Specific reaction: Proton [Periplasm] + multidrug [Cytoplasm] = Proton [Cytoplasm] + multidrug [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA