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The map label for this gene is hcpA [H]

Identifier: 119943807

GI number: 119943807

Start: 19699

End: 20217

Strand: Direct

Name: hcpA [H]

Synonym: Ping_0013

Alternate gene names: 119943807

Gene position: 19699-20217 (Clockwise)

Preceding gene: 119943806

Following gene: 119943808

Centisome position: 0.43

GC content: 39.11

Gene sequence:

>519_bases
ATGCCTACTGAAATTTATATGTCCATTAATGACCCTGAAGGGTGTTTAACAGAAGAATCTTGTTCAAAAGAAAGTATAGG
TTCATTCTTTAAGGCCGATCATGAAGAAGAGTCATTAATTCTAGCTTACGATCATAAAGTAAGTGTGCCAACTAATTCAT
TAACGGGACAGGTGACAGGGACAAGGAAACATGAATATCTGGAGGTCAGTAAATTTATAGATAAAAGCTCCCCCTTATTG
CTTAATACTGTGACCTCCCCATCGGAACTGGAAGTCATTTTGAGGTTCTTTAGAACCCCGGATGAAACCAGTGCAGGTGA
ACCTGTAGAGTATTACAACATCACTTTGCAGCGCGCTAAAATTGTGAGTATTAATACAATATCACCTAATATTTTAGATG
AAGTAAATGACGGTTTAATGCCCTATGAAAAGGTCAGGTTTACTTATGGGCAAATTCAAGCGGATCATGTGGTTTGTGGA
ACAACTGCGATTGATGATTGGTCTGGGGAAGGCGGTTAG

Upstream 100 bases:

>100_bases
TCCTCACTTTAAATTTATGGGAGCAAGTTTCACACTCTCTCTAACCAGTATTTTAGAACGAGCTTAATCTTGTGCCATTT
AAAAATATAAAGGAATAATT

Downstream 100 bases:

>100_bases
GTTATAAAGTATGAAAAATTTCATTTATAACTCAACAATATGGATACGCATCACTTGCATATCTATATTGCTGAGCGGTT
GTAGTCTATTGCCTAATAGT

Product: secreted protein Hcp, potential oxidative stress protein

Products: NA

Alternate protein names: Secreted protein hcp [H]

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MPTEIYMSINDPEGCLTEESCSKESIGSFFKADHEEESLILAYDHKVSVPTNSLTGQVTGTRKHEYLEVSKFIDKSSPLL
LNTVTSPSELEVILRFFRTPDETSAGEPVEYYNITLQRAKIVSINTISPNILDEVNDGLMPYEKVRFTYGQIQADHVVCG
TTAIDDWSGEGG

Sequences:

>Translated_172_residues
MPTEIYMSINDPEGCLTEESCSKESIGSFFKADHEEESLILAYDHKVSVPTNSLTGQVTGTRKHEYLEVSKFIDKSSPLL
LNTVTSPSELEVILRFFRTPDETSAGEPVEYYNITLQRAKIVSINTISPNILDEVNDGLMPYEKVRFTYGQIQADHVVCG
TTAIDDWSGEGG
>Mature_171_residues
PTEIYMSINDPEGCLTEESCSKESIGSFFKADHEEESLILAYDHKVSVPTNSLTGQVTGTRKHEYLEVSKFIDKSSPLLL
NTVTSPSELEVILRFFRTPDETSAGEPVEYYNITLQRAKIVSINTISPNILDEVNDGLMPYEKVRFTYGQIQADHVVCGT
TAIDDWSGEGG

Specific function: Unknown

COG id: COG3157

COG function: function code S; Hemolysin-coregulated protein (uncharacterized)

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hcp1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017728
- InterPro:   IPR008514 [H]

Pfam domain/function: PF05638 DUF796 [H]

EC number: NA

Molecular weight: Translated: 19131; Mature: 18999

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTEIYMSINDPEGCLTEESCSKESIGSFFKADHEEESLILAYDHKVSVPTNSLTGQVTG
CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEEC
TRKHEYLEVSKFIDKSSPLLLNTVTSPSELEVILRFFRTPDETSAGEPVEYYNITLQRAK
CCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEE
IVSINTISPNILDEVNDGLMPYEKVRFTYGQIQADHVVCGTTAIDDWSGEGG
EEEEECCCCHHHHHHCCCCCCHHHHEEEECEEEECEEEECCCEECCCCCCCC
>Mature Secondary Structure 
PTEIYMSINDPEGCLTEESCSKESIGSFFKADHEEESLILAYDHKVSVPTNSLTGQVTG
CCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCEEECCCCCCEEEEEC
TRKHEYLEVSKFIDKSSPLLLNTVTSPSELEVILRFFRTPDETSAGEPVEYYNITLQRAK
CCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEEE
IVSINTISPNILDEVNDGLMPYEKVRFTYGQIQADHVVCGTTAIDDWSGEGG
EEEEECCCCHHHHHHCCCCCCHHHHEEEECEEEECEEEECCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]