| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
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The map label for this gene is 119943806
Identifier: 119943806
GI number: 119943806
Start: 18217
End: 19665
Strand: Direct
Name: 119943806
Synonym: Ping_0012
Alternate gene names: NA
Gene position: 18217-19665 (Clockwise)
Preceding gene: 119943805
Following gene: 119943807
Centisome position: 0.4
GC content: 35.89
Gene sequence:
>1449_bases ATGGAAGCAATAAAAGAAGAATCATTAGTTGGAAGTATATTAGGTTTAAGCAAGCTTTTAAGTGACCCATATAGTTATGA TATTGCAAGTCAAGGGATGCAAACGCTGCTCACTCAGGTACTTGAAGAAGATTGTGATTTTGATAATCTAAGAGTAGATA AACGTTATGTTGAATCTCTTATTGATGAGCTTGATGAAAAACTCAGTAAGCAAATGGATGAAATTATCCATAATAGTGTT TTTCAAGCACTAGAATCGCCATGGAGAAGTTTAAAACTGCTAACGGATAGAACAGATTTCAAAGAAAATATAAAAATTGA AATATTATCAGTATCCAAAAATGAGTTACTGGAAGATTTTGAAGATGCGGCTGATATAATTGAAACAGGTCTTTATCGTA AAGTTTACACCGATGAATTCGGACAATATGGTGGTGATCCCTATGGAGTGATTATTGGAAATTATTATATTTCCCCTTCA GTCCCCGATATGAATTTACTGAGTCATATGTCCAGTTTAAGTGCTATGACACATGCTCCATTTATAACAAGTGCAAGTGA AGAATTTTTTGGACTGGAAGATTTTGCAGAATTACCTGAGTTAAAACAATTAGAAGCTATGTTTGAAGGCCCGCAATATT TATCTTGGCGTAACTTTAGAAGCAGTGATGATGCCAGAAATGTCGGCCTCACTTTACCTCGATTTATGTTAAGGCGAACA TATGGTGAAAATATTCCAGTAAGTGCTTTTAACTATAAAGAAAGTATTAACAACAAGTCAGAGTACCTATGGGGCAACGC AGCATTTGCTTATGCAACGCGATTAAATAACAGTTTTGCAAAATATCGTTGGTGTCCAAATATCATCGGTCCGCAATCAG GTGGTGAAGTCGCTGATTTACCTATTGATATCGTTGATGATAGCGGCACTGATAAAGTTTTTGGACCAGTAGAACTTAAA GTGTCAGATAGGAAAGAATTTGAATTATCTGAACTTGGTTTTATTCCTTTTACACTCCGAAAAGACTCTGACAGTGCAGT CTTTTTCTCATCTAATTCAACCCAATTGCCTAAAAAATTCACCAATGATGATGAAGGTAAACAGGCTGAAATTAATTACC GTTTAGGTACACAACTACCTTACTTATTTATAGTAAACAGGCTGGCTCACTATATTAAGGTATTACAACGCGAAAATTTG GGTAGTTGGAAGAGTAAAACAGAGCTAGAAACAGAGCTTAATAAATGGATCAGGCAATATGTTGCAGATCAAGATAATCC TTCCGCAGCAACAAGAAGTCAACGACCACTCAGAAAAGCTGCAATTTCAGTCAGTGACATTGATACTGAAGTAGGTTGGT ATTCTGTCGGTATGGAAGTGACTCCTCACTTTAAATTTATGGGAGCAAGTTTCACACTCTCTCTAACCAGTATTTTAGAA CGAGCTTAA
Upstream 100 bases:
>100_bases ATCTATAAAGTGTGAATGAAATTATTCTATTGCTTCTAGCCCTAAATATAAATGGCTTAGCAGATAATGACAGAACATTG GTGCCTCTTAGGAGTAAAAA
Downstream 100 bases:
>100_bases TCTTGTGCCATTTAAAAATATAAAGGAATAATTATGCCTACTGAAATTTATATGTCCATTAATGACCCTGAAGGGTGTTT AACAGAAGAATCTTGTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE RA
Sequences:
>Translated_482_residues MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE RA >Mature_482_residues MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESLIDELDEKLSKQMDEIIHNSV FQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDFEDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPS VPDMNLLSHMSSLSAMTHAPFITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADLPIDIVDDSGTDKVFGPVELK VSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKFTNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENL GSWKSKTELETELNKWIRQYVADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE RA
Specific function: Unknown
COG id: COG3517
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54816; Mature: 54816
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESL CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH IDELDEKLSKQMDEIIHNSVFQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH EDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPSVPDMNLLSHMSSLSAMTHAP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC FITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT CEECCCHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADL CCCCCCCEEECHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEECC PIDIVDDSGTDKVFGPVELKVSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKF CEEEECCCCCCCEECCEEEEECCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCHHC TNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENLGSWKSKTELETELNKWIRQY CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE HCCCCCCCHHHHHHCCHHHHHCCHHHCCCCCCEEEECCEECCCEEEECCHHHHHHHHHHH RA CC >Mature Secondary Structure MEAIKEESLVGSILGLSKLLSDPYSYDIASQGMQTLLTQVLEEDCDFDNLRVDKRYVESL CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH IDELDEKLSKQMDEIIHNSVFQALESPWRSLKLLTDRTDFKENIKIEILSVSKNELLEDF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHH EDAADIIETGLYRKVYTDEFGQYGGDPYGVIIGNYYISPSVPDMNLLSHMSSLSAMTHAP HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCC FITSASEEFFGLEDFAELPELKQLEAMFEGPQYLSWRNFRSSDDARNVGLTLPRFMLRRT CEECCCHHHCCHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH YGENIPVSAFNYKESINNKSEYLWGNAAFAYATRLNNSFAKYRWCPNIIGPQSGGEVADL CCCCCCCEEECHHHHCCCCCCEEECCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCEECC PIDIVDDSGTDKVFGPVELKVSDRKEFELSELGFIPFTLRKDSDSAVFFSSNSTQLPKKF CEEEECCCCCCCEECCEEEEECCCCCCCHHHCCCEEEEEECCCCCEEEEECCCCCCCHHC TNDDEGKQAEINYRLGTQLPYLFIVNRLAHYIKVLQRENLGSWKSKTELETELNKWIRQY CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH VADQDNPSAATRSQRPLRKAAISVSDIDTEVGWYSVGMEVTPHFKFMGASFTLSLTSILE HCCCCCCCHHHHHHCCHHHHHCCHHHCCCCCCEEEECCEECCCEEEECCHHHHHHHHHHH RA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA