| Definition | Psychromonas ingrahamii 37, complete genome. |
|---|---|
| Accession | NC_008709 |
| Length | 4,559,598 |
Click here to switch to the map view.
The map label for this gene is 119943801
Identifier: 119943801
GI number: 119943801
Start: 12572
End: 13027
Strand: Reverse
Name: 119943801
Synonym: Ping_0007
Alternate gene names: NA
Gene position: 13027-12572 (Counterclockwise)
Preceding gene: 119943802
Following gene: 119943800
Centisome position: 0.29
GC content: 40.35
Gene sequence:
>456_bases ATGCCCCCTAAACCTATTAAGGATTTCCTTGTCTACATAGAAGAATGTCATCAGGCGCTAGCTGATTTATATCTTAGACT TAGCCTTGAGGAAAATAATGAGAAGGTAAAATTGTTACTCGATTTTATGAAAAAAAAAGAGCAGCTATCTGGCCTGCAGC TTCATCAATATACGCAGCAGGCACCTCCCAGTTTATTAGAAACTGACTTAGATAGTGAATTTGATGACAGTTTTCCAATA AAATGTCAGCAGATGGAATTAAAAGCTGAATTATCCCTTGATGATGTTGTCGCTTTGGCAATCCGCTTTGACATACAGCT TATAGATTTACTGCAGACCGCAGCCCATAGTTCACCCACCATAAAGGCAGAAATAGCGCTTGGAAAGCTAGCCAATCAGG AAGAGGAAACCTTACACCATGTGGTGACGGCCCGCCATGAATTCGAATATATGTAA
Upstream 100 bases:
>100_bases ACTTCATATAACTGTTATTACGGTGCTAAAAAATGACTCCGCCAAGCTGATAAATTCAGTATTGGTGTTGGTCTGAACCT ATCATATTAAGGAATATATT
Downstream 100 bases:
>100_bases TTTACAACTATTCGCTTACGGTCAATCACCTGATGTCCTTATCGACTTGACTCAGGTTATCTTATATTTACGCTCTTTTT AACACTTAACCTGATAAGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MPPKPIKDFLVYIEECHQALADLYLRLSLEENNEKVKLLLDFMKKKEQLSGLQLHQYTQQAPPSLLETDLDSEFDDSFPI KCQQMELKAELSLDDVVALAIRFDIQLIDLLQTAAHSSPTIKAEIALGKLANQEEETLHHVVTARHEFEYM
Sequences:
>Translated_151_residues MPPKPIKDFLVYIEECHQALADLYLRLSLEENNEKVKLLLDFMKKKEQLSGLQLHQYTQQAPPSLLETDLDSEFDDSFPI KCQQMELKAELSLDDVVALAIRFDIQLIDLLQTAAHSSPTIKAEIALGKLANQEEETLHHVVTARHEFEYM >Mature_150_residues PPKPIKDFLVYIEECHQALADLYLRLSLEENNEKVKLLLDFMKKKEQLSGLQLHQYTQQAPPSLLETDLDSEFDDSFPIK CQQMELKAELSLDDVVALAIRFDIQLIDLLQTAAHSSPTIKAEIALGKLANQEEETLHHVVTARHEFEYM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17349; Mature: 17218
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKPIKDFLVYIEECHQALADLYLRLSLEENNEKVKLLLDFMKKKEQLSGLQLHQYTQQ CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH APPSLLETDLDSEFDDSFPIKCQQMELKAELSLDDVVALAIRFDIQLIDLLQTAAHSSPT CCHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKAEIALGKLANQEEETLHHVVTARHEFEYM EEEHHHHHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PPKPIKDFLVYIEECHQALADLYLRLSLEENNEKVKLLLDFMKKKEQLSGLQLHQYTQQ CCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH APPSLLETDLDSEFDDSFPIKCQQMELKAELSLDDVVALAIRFDIQLIDLLQTAAHSSPT CCHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC IKAEIALGKLANQEEETLHHVVTARHEFEYM EEEHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA