| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871511
Identifier: 119871511
GI number: 119871511
Start: 5726626
End: 5729055
Strand: Direct
Name: 119871511
Synonym: Mkms_5488
Alternate gene names: NA
Gene position: 5726626-5729055 (Clockwise)
Preceding gene: 119871510
Following gene: 119871512
Centisome position: 99.82
GC content: 73.62
Gene sequence:
>2430_bases GTGGCGGCGCCACGCATGACGACGGCGGTGCCGCGTCTGCTGGCCGCACTGGTCCTGTTGCTGCTGACCGCCATCTCGAC CGTCCTTCCGCATGCCGCCGCCGGGGAGCCCGGCGCCGCCGCGTTCCTGCAGTTGCGCATCGACCGCGTGACCCCCGACG TCGTCACCACGGCCAGCGATCCGGTGGTCACGGTGTCCGGGGTGGTGCGCAATGTCGGGGACCGCACGGTCCGCGATGTG GTGCTGCGTCTCGAACACGCGCCGGCGGTCGACTCGTCGTCGGGGCTGCGCACCAACCTGACCGGCAACCTGGATCAGTT CGAGCCGGTCGCCGACTTCGTCACCGTCGCCCCCGAACTCGATCGCGGTAAAGAGGTGCCGTTCACCTTCGCCTATCCGA TTCGCGCCGCGGACGGGCCGTCGCTGCGCATCGAGTCGCCCGGCGTGTATCCGCTGATGGTCAACGTCAACGGCACACCG GACTACGGGGCGCCGGCCCGGCTCGACGACGCGCGTTTCCTGCTGCCGGTGCTGGGCGTGCCGTCCGAACCCGGCGCCGA GTCGGCCGCCGAGACACTGACCTCCGTCGTACCTCCCGACACGTCGAAACCCGTGCGGCTGACCATGTTCTGGCCCCTTG CCGACAAACCCCGGCTGGCCGCGGGCATCCCGGGCGGCACGACACCGGTGCGGTTGATCGACGACGACCTCGCGGCGTCG CTGGCGCCCGGCGGCCGGCTGGAGACGCTGCTGGCCGCGGTGGACTTCGCCACCGGCCCGACCGTGGACCAGGGCGGTGA GCTCGGCCGAGCACTGTGCCTGGCGGTCGACCCGGACCTGCTGGTGACGGTCAACGCGATGACGGCCGGATACGCCGTGA ACGACGGACCCGACGCCGGGCCGACCACGCCGACCCGCCCCGGCACCGGACAGGAAGCGGCCGTCGGCTGGCTCAACCGG CTCAAGGTGCTCGCCCGACGGATGTGCGTGACGGCCACGCCGTACGCCCAGGCGGATCTCGACGCGCTGCAGCGGGTGGG CGATCCGCGCCTCGGCGCGATCGCCACCACCGGCGCCGCCGACATCGTCGACCAGATCCTCGGCGTCCCCTCGACCCGCG GTGTCACGCTGGTCGGCGACGGTCCGCTCACCGGGGCGGCGGCGCAGCTGCTGTCCACGCAGGGGCGGACGGTGGCGGTC ACCGCGGCCACCCTCACGGCCCGCGACGACGCGACCGGCCTCGGCTCGACCGCCGACCTGGCCCCCGTGCGGTACTCCCC CAACCTCGTCGCGATGCCGTTCGACCCGACGATCGGTGCGGCACTCGCCGGGGCCGGCGCCGAACCCGCGGCGCCGACCT ACCTCGACCCGTCGCTGGACGTCCCGCTGCGGCACGACTCGGCGGTGGCCCGGCGCCAGAACGCGATCGGCTCCCTGTTG TGGCGCGGTCTGCAACCCGACACCGGCCCGCGTACCCAGATCGTGGTGCCGCCACTGGTGTGGAGCCCGCGGCCCGACGA CGCCCAGGCCGTCCTGACCTCGATGGGCACCGCGATCAGGGCCGGCCTCGCCCTCCCCCGACCGCTGCGTGAGGTGATCG CCGAGGGCGATGCCGTACCGCCGCAGCCCGATGCCGGGTGGCCGGCCGACGACATCGGCAACCCGCGCGGCCGCATCGAC GACGCGGTGACGTCCGGGATCGCCGCCACGAACGGACGGCTCTCGGGCCTGACCGCGGCCCTCGGCGTCGACGAACGCAC CGGGCTGACCGGGATCGGGTACACCGCGCCGCTGCGTGAGGACATGCTGCGCGCGCTGAGCCAGTCGGTGCCGCCGCCCG CCCGCGACGGATTGGCCCGGCAGCGCCTCGCGGTGGTCACCGACACCGTCGGCGACATGTTCGGCGCGGTGCGGATCATG AACCCCGGTGGCGCGTACACCCTGGCCACCGAGCGCAGCCCGCTGCCGCTGGCGCTGCGCAACGATCTGCCGGTGCCGAT CCGGGTGCGGCTGGCCGTCGACGCACCCCCGGGGATGACGGTCGACGACCTGGGCGAGATCAGCCTGCCGCCCGGATATC TGCCGCTGCGGGTTCCGATCGAGGTGCACTTCACCCAGCGGGTCGCCGTCGACGTGGCGCTGCGCACCGCCGAGGGGTTG CCGCTCGGTGAACCGGTGCGGCTGTCGGTGCACTCCAACGCGTACGGCAAAGTGCTGTTCATCATCACCATGAGCGCCGG CGCGGTGCTGGTGCTGCTGGCCGGCCGCCGGCTGTGGCACCGCTTCCGCGGCCAACCCGACCCGGCCGACCTCGACCGGC CGAAACGCGCGGTGGCCGACCGGACCCACGAGGCGCATGCGCCTACCGACCCGCTCGACACCGCCCTCCGGTACGCCCCT GGCGACCAACCCGTCGGCGACCAGAAATGA
Upstream 100 bases:
>100_bases CGCAGACCCATTCGCACACCCGCAACCGTCGTCGTGACGAGTCCAGCCAAACCCCTCCCGGCCGGCGGACGAACGGATGC GGACAAGGGCAGTGAGGACC
Downstream 100 bases:
>100_bases GCACCACCGGGTGGGAACCGGGTCCCCCGCCGAACCGGCCGCCCGATCCCCCGGCACAGCCGTTCCCGCCGCCGCGCCGC ATCCCGCCCCCGCCCGGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; Secreted Protein
Number of amino acids: Translated: 809; Mature: 808
Protein sequence:
>809_residues MAAPRMTTAVPRLLAALVLLLLTAISTVLPHAAAGEPGAAAFLQLRIDRVTPDVVTTASDPVVTVSGVVRNVGDRTVRDV VLRLEHAPAVDSSSGLRTNLTGNLDQFEPVADFVTVAPELDRGKEVPFTFAYPIRAADGPSLRIESPGVYPLMVNVNGTP DYGAPARLDDARFLLPVLGVPSEPGAESAAETLTSVVPPDTSKPVRLTMFWPLADKPRLAAGIPGGTTPVRLIDDDLAAS LAPGGRLETLLAAVDFATGPTVDQGGELGRALCLAVDPDLLVTVNAMTAGYAVNDGPDAGPTTPTRPGTGQEAAVGWLNR LKVLARRMCVTATPYAQADLDALQRVGDPRLGAIATTGAADIVDQILGVPSTRGVTLVGDGPLTGAAAQLLSTQGRTVAV TAATLTARDDATGLGSTADLAPVRYSPNLVAMPFDPTIGAALAGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLL WRGLQPDTGPRTQIVVPPLVWSPRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDAVPPQPDAGWPADDIGNPRGRID DAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLREDMLRALSQSVPPPARDGLARQRLAVVTDTVGDMFGAVRIM NPGGAYTLATERSPLPLALRNDLPVPIRVRLAVDAPPGMTVDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGL PLGEPVRLSVHSNAYGKVLFIITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRPKRAVADRTHEAHAPTDPLDTALRYAP GDQPVGDQK
Sequences:
>Translated_809_residues MAAPRMTTAVPRLLAALVLLLLTAISTVLPHAAAGEPGAAAFLQLRIDRVTPDVVTTASDPVVTVSGVVRNVGDRTVRDV VLRLEHAPAVDSSSGLRTNLTGNLDQFEPVADFVTVAPELDRGKEVPFTFAYPIRAADGPSLRIESPGVYPLMVNVNGTP DYGAPARLDDARFLLPVLGVPSEPGAESAAETLTSVVPPDTSKPVRLTMFWPLADKPRLAAGIPGGTTPVRLIDDDLAAS LAPGGRLETLLAAVDFATGPTVDQGGELGRALCLAVDPDLLVTVNAMTAGYAVNDGPDAGPTTPTRPGTGQEAAVGWLNR LKVLARRMCVTATPYAQADLDALQRVGDPRLGAIATTGAADIVDQILGVPSTRGVTLVGDGPLTGAAAQLLSTQGRTVAV TAATLTARDDATGLGSTADLAPVRYSPNLVAMPFDPTIGAALAGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLL WRGLQPDTGPRTQIVVPPLVWSPRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDAVPPQPDAGWPADDIGNPRGRID DAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLREDMLRALSQSVPPPARDGLARQRLAVVTDTVGDMFGAVRIM NPGGAYTLATERSPLPLALRNDLPVPIRVRLAVDAPPGMTVDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGL PLGEPVRLSVHSNAYGKVLFIITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRPKRAVADRTHEAHAPTDPLDTALRYAP GDQPVGDQK >Mature_808_residues AAPRMTTAVPRLLAALVLLLLTAISTVLPHAAAGEPGAAAFLQLRIDRVTPDVVTTASDPVVTVSGVVRNVGDRTVRDVV LRLEHAPAVDSSSGLRTNLTGNLDQFEPVADFVTVAPELDRGKEVPFTFAYPIRAADGPSLRIESPGVYPLMVNVNGTPD YGAPARLDDARFLLPVLGVPSEPGAESAAETLTSVVPPDTSKPVRLTMFWPLADKPRLAAGIPGGTTPVRLIDDDLAASL APGGRLETLLAAVDFATGPTVDQGGELGRALCLAVDPDLLVTVNAMTAGYAVNDGPDAGPTTPTRPGTGQEAAVGWLNRL KVLARRMCVTATPYAQADLDALQRVGDPRLGAIATTGAADIVDQILGVPSTRGVTLVGDGPLTGAAAQLLSTQGRTVAVT AATLTARDDATGLGSTADLAPVRYSPNLVAMPFDPTIGAALAGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLLW RGLQPDTGPRTQIVVPPLVWSPRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDAVPPQPDAGWPADDIGNPRGRIDD AVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLREDMLRALSQSVPPPARDGLARQRLAVVTDTVGDMFGAVRIMN PGGAYTLATERSPLPLALRNDLPVPIRVRLAVDAPPGMTVDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGLP LGEPVRLSVHSNAYGKVLFIITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRPKRAVADRTHEAHAPTDPLDTALRYAPG DQPVGDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84236; Mature: 84105
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPRMTTAVPRLLAALVLLLLTAISTVLPHAAAGEPGAAAFLQLRIDRVTPDVVTTASD CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEECCCC PVVTVSGVVRNVGDRTVRDVVLRLEHAPAVDSSSGLRTNLTGNLDQFEPVADFVTVAPEL CEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCC DRGKEVPFTFAYPIRAADGPSLRIESPGVYPLMVNVNGTPDYGAPARLDDARFLLPVLGV CCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCC PSEPGAESAAETLTSVVPPDTSKPVRLTMFWPLADKPRLAAGIPGGTTPVRLIDDDLAAS CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEECCHHHHH LAPGGRLETLLAAVDFATGPTVDQGGELGRALCLAVDPDLLVTVNAMTAGYAVNDGPDAG CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEHCCCEEECCCCCCC PTTPTRPGTGQEAAVGWLNRLKVLARRMCVTATPYAQADLDALQRVGDPRLGAIATTGAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH DIVDQILGVPSTRGVTLVGDGPLTGAAAQLLSTQGRTVAVTAATLTARDDATGLGSTADL HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC APVRYSPNLVAMPFDPTIGAALAGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLL CEEEECCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WRGLQPDTGPRTQIVVPPLVWSPRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDAVP HCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC PQPDAGWPADDIGNPRGRIDDAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLRE CCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHH DMLRALSQSVPPPARDGLARQRLAVVTDTVGDMFGAVRIMNPGGAYTLATERSPLPLALR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCEEEC NDLPVPIRVRLAVDAPPGMTVDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGL CCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCC PLGEPVRLSVHSNAYGKVLFIITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRPKRAVAD CCCCCEEEEEECCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RTHEAHAPTDPLDTALRYAPGDQPVGDQK CCCCCCCCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure AAPRMTTAVPRLLAALVLLLLTAISTVLPHAAAGEPGAAAFLQLRIDRVTPDVVTTASD CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCEECCCC PVVTVSGVVRNVGDRTVRDVVLRLEHAPAVDSSSGLRTNLTGNLDQFEPVADFVTVAPEL CEEEHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHCCCC DRGKEVPFTFAYPIRAADGPSLRIESPGVYPLMVNVNGTPDYGAPARLDDARFLLPVLGV CCCCCCCEEEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHCCC PSEPGAESAAETLTSVVPPDTSKPVRLTMFWPLADKPRLAAGIPGGTTPVRLIDDDLAAS CCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCEEEECCHHHHH LAPGGRLETLLAAVDFATGPTVDQGGELGRALCLAVDPDLLVTVNAMTAGYAVNDGPDAG CCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCEEEEEEEHCCCEEECCCCCCC PTTPTRPGTGQEAAVGWLNRLKVLARRMCVTATPYAQADLDALQRVGDPRLGAIATTGAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCEEEECCHH DIVDQILGVPSTRGVTLVGDGPLTGAAAQLLSTQGRTVAVTAATLTARDDATGLGSTADL HHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCC APVRYSPNLVAMPFDPTIGAALAGAGAEPAAPTYLDPSLDVPLRHDSAVARRQNAIGSLL CEEEECCCEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH WRGLQPDTGPRTQIVVPPLVWSPRPDDAQAVLTSMGTAIRAGLALPRPLREVIAEGDAVP HCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCC PQPDAGWPADDIGNPRGRIDDAVTSGIAATNGRLSGLTAALGVDERTGLTGIGYTAPLRE CCCCCCCCHHHCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHH DMLRALSQSVPPPARDGLARQRLAVVTDTVGDMFGAVRIMNPGGAYTLATERSPLPLALR HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCEEEECCCCCCCEEEC NDLPVPIRVRLAVDAPPGMTVDDLGEISLPPGYLPLRVPIEVHFTQRVAVDVALRTAEGL CCCCCCEEEEEEECCCCCCCHHHCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCC PLGEPVRLSVHSNAYGKVLFIITMSAGAVLVLLAGRRLWHRFRGQPDPADLDRPKRAVAD CCCCCEEEEEECCCCCEEEEEEEECCCEEEHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH RTHEAHAPTDPLDTALRYAPGDQPVGDQK CCCCCCCCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA