| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is muT4 [H]
Identifier: 119871510
GI number: 119871510
Start: 5725808
End: 5726620
Strand: Direct
Name: muT4 [H]
Synonym: Mkms_5487
Alternate gene names: 119871510
Gene position: 5725808-5726620 (Clockwise)
Preceding gene: 119871506
Following gene: 119871511
Centisome position: 99.8
GC content: 72.2
Gene sequence:
>813_bases GTGTCGGAAGGCGAACAGCCCAAACCACGACGCCGCCGCGGGCGACGTCGCGGCCGACGCGCGGCCGGACCCCCGCAGGC GGCGACCGACCGATCCACCGCCTCCGCCGAGCCCGCCAACGGCTCCGGCCCCGCGGATACCCCCGGGACCGGTACCCCCG GAACAGGGGCCAAACCCACCGATCAGGCCCGCAAGGCCCGGCCCCGCCGCCCCCAGGAGCGGCTGCGCACCGTGCACGAG ACCTCGGCGGGCGGTCTGGTCATCGACGGTATCGACGGACCGAAGGACAGTCAGGTGGCGGCTTTGATCGGCCGCATCGA CCGCCGCGGCCGGATGCTGTGGTCACTGCCCAAGGGGCACATCGAGATGGGTGAGACGGCCGAGCAGACCGCGATCCGCG AGGTCGCCGAGGAGACCGGCATCCGCGGTGACGTGCTCGCCGCGCTGGGCAGCATCGACTACTGGTTCGTCACCGAGGGG CGCCGCGTCCACAAGACCGTGCACCATTACCTGATGCGATTCCTCGGCGGTGAACTGTCCGACGAGGACGTCGAGGTGAC CGAGGTGGCCTGGGTGCCGCTCGAGGAACTGCCCAGCCGGCTGGCCTACGCCGACGAACGCCGACTGGCCGAGGTCGCCC ACGAACTCATCGACAAACTGCACGCCGACGGTCCGGCGGCGCTCCCGCCGCTGCCGCGCTCGGCGCCGCGGCGACGCCCG CAGACCCATTCGCACACCCGCAACCGTCGTCGTGACGAGTCCAGCCAAACCCCTCCCGGCCGGCGGACGAACGGATGCGG ACAAGGGCAGTGA
Upstream 100 bases:
>100_bases TGGGTCGTGCGGCACGTTCGTTGAGCCTAGAGGGTAACGGTCCGGCAGCGACCGGCGAGTGTGGCCGGAGCGAAACTGGG TGGCAGCTACTATCGCTTGG
Downstream 100 bases:
>100_bases GGACCGTGGCGGCGCCACGCATGACGACGGCGGTGCCGCGTCTGCTGGCCGCACTGGTCCTGTTGCTGCTGACCGCCATC TCGACCGTCCTTCCGCATGC
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 269
Protein sequence:
>270_residues MSEGEQPKPRRRRGRRRGRRAAGPPQAATDRSTASAEPANGSGPADTPGTGTPGTGAKPTDQARKARPRRPQERLRTVHE TSAGGLVIDGIDGPKDSQVAALIGRIDRRGRMLWSLPKGHIEMGETAEQTAIREVAEETGIRGDVLAALGSIDYWFVTEG RRVHKTVHHYLMRFLGGELSDEDVEVTEVAWVPLEELPSRLAYADERRLAEVAHELIDKLHADGPAALPPLPRSAPRRRP QTHSHTRNRRRDESSQTPPGRRTNGCGQGQ
Sequences:
>Translated_270_residues MSEGEQPKPRRRRGRRRGRRAAGPPQAATDRSTASAEPANGSGPADTPGTGTPGTGAKPTDQARKARPRRPQERLRTVHE TSAGGLVIDGIDGPKDSQVAALIGRIDRRGRMLWSLPKGHIEMGETAEQTAIREVAEETGIRGDVLAALGSIDYWFVTEG RRVHKTVHHYLMRFLGGELSDEDVEVTEVAWVPLEELPSRLAYADERRLAEVAHELIDKLHADGPAALPPLPRSAPRRRP QTHSHTRNRRRDESSQTPPGRRTNGCGQGQ >Mature_269_residues SEGEQPKPRRRRGRRRGRRAAGPPQAATDRSTASAEPANGSGPADTPGTGTPGTGAKPTDQARKARPRRPQERLRTVHET SAGGLVIDGIDGPKDSQVAALIGRIDRRGRMLWSLPKGHIEMGETAEQTAIREVAEETGIRGDVLAALGSIDYWFVTEGR RVHKTVHHYLMRFLGGELSDEDVEVTEVAWVPLEELPSRLAYADERRLAEVAHELIDKLHADGPAALPPLPRSAPRRRPQ THSHTRNRRRDESSQTPPGRRTNGCGQGQ
Specific function: May be involved in the GO system responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8- oxoguanine, 8-oxo-dGTP) from DNA and the nucleotide pool. In vitro has dATPase rather than 8-oxo-dGTPase activity [H]
COG id: COG0494
COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: NA
Molecular weight: Translated: 29608; Mature: 29477
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEGEQPKPRRRRGRRRGRRAAGPPQAATDRSTASAEPANGSGPADTPGTGTPGTGAKPT CCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQARKARPRRPQERLRTVHETSAGGLVIDGIDGPKDSQVAALIGRIDRRGRMLWSLPKGH HHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCC IEMGETAEQTAIREVAEETGIRGDVLAALGSIDYWFVTEGRRVHKTVHHYLMRFLGGELS CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC DEDVEVTEVAWVPLEELPSRLAYADERRLAEVAHELIDKLHADGPAALPPLPRSAPRRRP CCCCEEHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QTHSHTRNRRRDESSQTPPGRRTNGCGQGQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SEGEQPKPRRRRGRRRGRRAAGPPQAATDRSTASAEPANGSGPADTPGTGTPGTGAKPT CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC DQARKARPRRPQERLRTVHETSAGGLVIDGIDGPKDSQVAALIGRIDRRGRMLWSLPKGH HHHHHCCCCCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCC IEMGETAEQTAIREVAEETGIRGDVLAALGSIDYWFVTEGRRVHKTVHHYLMRFLGGELS CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHHHCCCCC DEDVEVTEVAWVPLEELPSRLAYADERRLAEVAHELIDKLHADGPAALPPLPRSAPRRRP CCCCEEHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC QTHSHTRNRRRDESSQTPPGRRTNGCGQGQ CCHHHHHHHHHCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]