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The map label for this gene is 119871477

Identifier: 119871477

GI number: 119871477

Start: 5687402

End: 5688961

Strand: Direct

Name: 119871477

Synonym: Mkms_5454

Alternate gene names: NA

Gene position: 5687402-5688961 (Clockwise)

Preceding gene: 119871475

Following gene: 119871486

Centisome position: 99.13

GC content: 67.88

Gene sequence:

>1560_bases
ATGTATGTTCGAAGTATGTCAGGGCACGACCTCCAGGCCGCGGTGACCGCGCTGCGTGCGGCCTTCGATGAGGTGGCCTC
CTGTGATGTCGCCTTGTTGGACCGCGCCGAACTCGTTGCGGCGCTGGATGAACTCGAGGCCCTGGGGTGCCGGCTGCCCA
CGATGAGCCACCGCTTGCTGGCCCGTCTGCGGTCCGAGGCGACACCGCAGCAGATGGGTGCCAAGTCGTGGAGAGAGGTG
CTGACGGTCCGCTGGCGGATCTCGGGCAGTGAGGCCAACCGACGACTCACCGAGGCCGGTCTGCTGGCGCCGCGCCAGGC
ATTGACCGGTCCTTCGCTGCCGCCGGTGTTACCCGCAACGGCTGTGGCTCAAGCGCACGGGTTGATCAACAGCGAACACG
TCGAGGTCATCCGCAGAGCGGTCGACAAGTTGCCGGGGTTCGTCGACACCGTCACGCGGGAGCAGTTCGAGGTCACCCTG
GTCCGCACCGCGGTCGGTGTCGGCCCCAAGGAACTCAAGGACACAGCCGACCTCACGTTGTTCCTGCTCGATCAGGACGG
TCCCGAGCCCGATGACACCGAACGGGCCCGCAAGCGTGGCGTGTCGCGATCGAAACAACGCCCCGACGGGATGGTCGACC
TGTCCGGGCACCTGACGCCGGAAGCGTGGGCGGTGTGGGAGGCGATCTTCGCGAAGTACGCGGCGCCGGGCATGTGCAAT
CCCGACGATCCCGAACCCTGCACGTCGGGGACCCCGTCGCAGGAGCAGATCGACAACGACCACCGCACCCTGGCCCAGCG
CCAACACGACGCGATGGTCGCGATCGGGCGCATCGCCTTGATGAGCGGCGAACTCGGCCAACTGAATGGACTGCCGGTCT
CGATCATCATCCGCACCACGCTGGAGGATCTGGAGTCGCGGGCCGGGGTCGGCACCACCGGTGGCGGCACCGTCGTGCCG
ATCGCCGATGTGATCCGGATGGCCGGCCACGCCAACCACTACCTGGCGGTGTTCGACGGAGCTACCGGATCAGCGCTTGA
TCTGTTCCGCGCCAAGCGGACTGCCTCGGCTGCGCAACGCATCATGCTGATCGCGCGCGATGGCGGATGCACCAAACCGT
GTTGCACTGTCGGCGCCTACGGCTGCCAGGTGCATCATGTGGATGCCGACTGGTCAGACGGCGGCAACACCAACGTCGAC
GAACTCGGGCTCGCGTGCGGGGCGGACAACCGCAGCGTCGACAAAGACGGCGGCTGGTCCACCCGCATGAACGATCAGTG
CGAAGTCGAATGGATCCCGCCGCCACGGCTGGACACCGGCCAGGCCCGGCTCAACCACTACCACCGGCCCGAACGCCTTC
TCCGGCCACCCGACGACCCGAGCGTTCCCGGCGATCCCGTTGTATGGGCGGAGCCGGCTGACGCCAACGGCATCAGCGAC
GCCGAGCCGGCTGACGAGTGCGACGAGACTGTTCCCGCCGAGCCGGACTCGCCGACGCAGTCCGCCGACAGCGCCGGTGA
ACCCGGCGGCCCCGCACCTCCGGAAGGTCGGGCGGCATGA

Upstream 100 bases:

>100_bases
TGACCACCTGATGACAGCCCGTCGCGACGTCCTCTGCATCCGCATCGGCATCTGAGCCGAGCGGCCCGGAGTCTGAGGCA
GTGGATTTGTCGGTGGTCGA

Downstream 100 bases:

>100_bases
CCGTCGCAAATAGTCGACACCACACCCGCACCGGATTAGTTCGCGACGGGTGAGGTCCCCCCGCTGCGCTGCCGTTGATC
TACGTGCATGTGCGGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 519; Mature: 519

Protein sequence:

>519_residues
MYVRSMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAVAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDTADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVDLSGHLTPEAWAVWEAIFAKYAAPGMCN
PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGADNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPSVPGDPVVWAEPADANGISD
AEPADECDETVPAEPDSPTQSADSAGEPGGPAPPEGRAA

Sequences:

>Translated_519_residues
MYVRSMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAVAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDTADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVDLSGHLTPEAWAVWEAIFAKYAAPGMCN
PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGADNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPSVPGDPVVWAEPADANGISD
AEPADECDETVPAEPDSPTQSADSAGEPGGPAPPEGRAA
>Mature_519_residues
MYVRSMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLLARLRSEATPQQMGAKSWREV
LTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPATAVAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTL
VRTAVGVGPKELKDTADLTLFLLDQDGPEPDDTERARKRGVSRSKQRPDGMVDLSGHLTPEAWAVWEAIFAKYAAPGMCN
PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTTLEDLESRAGVGTTGGGTVVP
IADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQRIMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVD
ELGLACGADNRSVDKDGGWSTRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPSVPGDPVVWAEPADANGISD
AEPADECDETVPAEPDSPTQSADSAGEPGGPAPPEGRAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Rv1128c/1148c/1588c/1702c/1945/3466 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003870
- InterPro:   IPR003615 [H]

Pfam domain/function: PF02720 DUF222 [H]

EC number: NA

Molecular weight: Translated: 55490; Mature: 55490

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVRSMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLRSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPAT
HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH
AVAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDTADLTL
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHCCCHHHHHCCCCEEE
FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVDLSGHLTPEAWAVWEAIFAKYAAPGMCN
EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTT
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEHHH
LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR
HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHE
IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGADNRSVDKDGGWS
EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC
TRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPSVPGDPVVWAEPADANGISD
CCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
AEPADECDETVPAEPDSPTQSADSAGEPGGPAPPEGRAA
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MYVRSMSGHDLQAAVTALRAAFDEVASCDVALLDRAELVAALDELEALGCRLPTMSHRLL
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
ARLRSEATPQQMGAKSWREVLTVRWRISGSEANRRLTEAGLLAPRQALTGPSLPPVLPAT
HHHHHCCCHHHHHHHHHHHHEEEEEEECCCHHHHHHHHHHCCCCHHHHCCCCCCCCCCHH
AVAQAHGLINSEHVEVIRRAVDKLPGFVDTVTREQFEVTLVRTAVGVGPKELKDTADLTL
HHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEHHHHCCCHHHHHCCCCEEE
FLLDQDGPEPDDTERARKRGVSRSKQRPDGMVDLSGHLTPEAWAVWEAIFAKYAAPGMCN
EEEECCCCCCCHHHHHHHHCCCHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCC
PDDPEPCTSGTPSQEQIDNDHRTLAQRQHDAMVAIGRIALMSGELGQLNGLPVSIIIRTT
CCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCEEEEEHHH
LEDLESRAGVGTTGGGTVVPIADVIRMAGHANHYLAVFDGATGSALDLFRAKRTASAAQR
HHHHHHHCCCCCCCCCCEECHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHE
IMLIARDGGCTKPCCTVGAYGCQVHHVDADWSDGGNTNVDELGLACGADNRSVDKDGGWS
EEEEECCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHEECCCCCCCCCCCCCC
TRMNDQCEVEWIPPPRLDTGQARLNHYHRPERLLRPPDDPSVPGDPVVWAEPADANGISD
CCCCCCEEEEECCCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCCCEEEECCCCCCCCCC
AEPADECDETVPAEPDSPTQSADSAGEPGGPAPPEGRAA
CCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]