| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871486
Identifier: 119871486
GI number: 119871486
Start: 5698813
End: 5699691
Strand: Direct
Name: 119871486
Synonym: Mkms_5463
Alternate gene names: NA
Gene position: 5698813-5699691 (Clockwise)
Preceding gene: 119871477
Following gene: 119871487
Centisome position: 99.33
GC content: 69.17
Gene sequence:
>879_bases GTGGCAGTGAGCAGCTCAGGGCGGCCGACGGCCGGGACCCGGGCCAAAGACAGCGACCGCAACGACATCTGCAAGGTGCT CGACACCGCACTCGGCGAGGGTCAGCTGTCGATGACCGAACACGGGGAGCGGGTCAAGGCCGCGACGCACGCCGCCACGC TGGGTGAACTGCAGGCGCTGGTGTCGGACCTGCAGACCGGCAACGCGCCGGTGCAACTGCCCGACCTGAGCAGGCCGAGG CGGCCACGGCTCCCGCTGAAGGCCGGCTGGGGGGTGAAGGCCGCGATGGCCGTGGTGCTGGTGGTGCTCGGCATGTGCAT CGGCTGGGGGCTCTACGGCAACACCAGTTCGCCACTGGACTTCCAGAGCGATCCGGGCGCCAAATCCGACGGCATCGGAC CCGTCGTGCTCACTCCGCCGCGACAGTTGCAGTCCCTCAACGGGCTCAACGGGTTGTTCGAGCAGATGCGGAAGCGGTTC GGCAGCACGATGGGTTACGAACTCGACATCCGCGCCGACACCGCGTCGCTGGACCGGCCGGACCCCTCCGACAACCGGCG TAAACAGAACTACGACTACCGCGGCGGGTGGGGCGATCCGTGGGGGTCGCCCAGCACGCTGGACTCCGATGACCGCCTCG TCGACCTGGCGAAGTTCGACTTCGAGAAGACCCTCGGCGTGCTGCGGGGGGCGCCCGACACCCTCGGCATGAACCGTGCC GACGTCACCGACACCTGGCTGCGGGTCGGACCCTCCGCCGACCCCGCGACCCCCGACCTCCTCACCCTCGAGATCATCGC CAACAGCGATTTCGGCACCGGCCGGATCGAGCTGTTCCCGGACGGCACCACCAAGGCGATCTGGCCCCCGAGCAGCTGA
Upstream 100 bases:
>100_bases TACGTCGGCACCGGAGACGCCGAACGGCAGACGCCGCAACGCCACCCCGGATTCGTCGTCTGGTCTGCGGTTCTGCCCGC CGAACTCTTACGATCTCGGC
Downstream 100 bases:
>100_bases GCAGCCGGCCCAGGTGACCGGGAAGCGAACAAAAGGCAACGCCCGATGTAGCGCCGTATATATCGGCGCGATACTATTCA ACGACGTGTCGATGCGTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MAVSSSGRPTAGTRAKDSDRNDICKVLDTALGEGQLSMTEHGERVKAATHAATLGELQALVSDLQTGNAPVQLPDLSRPR RPRLPLKAGWGVKAAMAVVLVVLGMCIGWGLYGNTSSPLDFQSDPGAKSDGIGPVVLTPPRQLQSLNGLNGLFEQMRKRF GSTMGYELDIRADTASLDRPDPSDNRRKQNYDYRGGWGDPWGSPSTLDSDDRLVDLAKFDFEKTLGVLRGAPDTLGMNRA DVTDTWLRVGPSADPATPDLLTLEIIANSDFGTGRIELFPDGTTKAIWPPSS
Sequences:
>Translated_292_residues MAVSSSGRPTAGTRAKDSDRNDICKVLDTALGEGQLSMTEHGERVKAATHAATLGELQALVSDLQTGNAPVQLPDLSRPR RPRLPLKAGWGVKAAMAVVLVVLGMCIGWGLYGNTSSPLDFQSDPGAKSDGIGPVVLTPPRQLQSLNGLNGLFEQMRKRF GSTMGYELDIRADTASLDRPDPSDNRRKQNYDYRGGWGDPWGSPSTLDSDDRLVDLAKFDFEKTLGVLRGAPDTLGMNRA DVTDTWLRVGPSADPATPDLLTLEIIANSDFGTGRIELFPDGTTKAIWPPSS >Mature_291_residues AVSSSGRPTAGTRAKDSDRNDICKVLDTALGEGQLSMTEHGERVKAATHAATLGELQALVSDLQTGNAPVQLPDLSRPRR PRLPLKAGWGVKAAMAVVLVVLGMCIGWGLYGNTSSPLDFQSDPGAKSDGIGPVVLTPPRQLQSLNGLNGLFEQMRKRFG STMGYELDIRADTASLDRPDPSDNRRKQNYDYRGGWGDPWGSPSTLDSDDRLVDLAKFDFEKTLGVLRGAPDTLGMNRAD VTDTWLRVGPSADPATPDLLTLEIIANSDFGTGRIELFPDGTTKAIWPPSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012551 [H]
Pfam domain/function: PF08044 DUF1707 [H]
EC number: NA
Molecular weight: Translated: 31348; Mature: 31216
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSSSGRPTAGTRAKDSDRNDICKVLDTALGEGQLSMTEHGERVKAATHAATLGELQAL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHH VSDLQTGNAPVQLPDLSRPRRPRLPLKAGWGVKAAMAVVLVVLGMCIGWGLYGNTSSPLD HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FQSDPGAKSDGIGPVVLTPPRQLQSLNGLNGLFEQMRKRFGSTMGYELDIRADTASLDRP CCCCCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC DPSDNRRKQNYDYRGGWGDPWGSPSTLDSDDRLVDLAKFDFEKTLGVLRGAPDTLGMNRA CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCC DVTDTWLRVGPSADPATPDLLTLEIIANSDFGTGRIELFPDGTTKAIWPPSS CHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure AVSSSGRPTAGTRAKDSDRNDICKVLDTALGEGQLSMTEHGERVKAATHAATLGELQAL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHCCHHHHHHHHHHHHHHHHHH VSDLQTGNAPVQLPDLSRPRRPRLPLKAGWGVKAAMAVVLVVLGMCIGWGLYGNTSSPLD HHHHHCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC FQSDPGAKSDGIGPVVLTPPRQLQSLNGLNGLFEQMRKRFGSTMGYELDIRADTASLDRP CCCCCCCCCCCCCCEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCC DPSDNRRKQNYDYRGGWGDPWGSPSTLDSDDRLVDLAKFDFEKTLGVLRGAPDTLGMNRA CCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCC DVTDTWLRVGPSADPATPDLLTLEIIANSDFGTGRIELFPDGTTKAIWPPSS CHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]