Click here to switch to the map view.

The map label for this gene is bbsG [H]

Identifier: 119871389

GI number: 119871389

Start: 5600891

End: 5602084

Strand: Direct

Name: bbsG [H]

Synonym: Mkms_5365

Alternate gene names: 119871389

Gene position: 5600891-5602084 (Clockwise)

Preceding gene: 119871388

Following gene: 119871390

Centisome position: 97.62

GC content: 67.42

Gene sequence:

>1194_bases
ATGACCGAGACGACTCCGAGCGCCGACGAGCTGCGCGCCGAGGTGCGTGCCTGGCTCGAGCACAACTGGAAGGGCCTGCC
GAAGTCGACCGATCCGTGGGTCGCCTCCCCGGAGCGGGTCGCCTGGCTGGAGAAGGTGCTCGACGCCGGTTACGCGGTGC
CGACCTATCCGACCGAGTGGTTCGGCCGCGAGTACCCGAACCATCTGGCGTCCGCGATCGAGAAGGAGTTCAAGGCGGTC
CGGGCCCCCGGCGCGCGCAGGGACAAGTACAGCATCCCGGCGAACACCGTGCTGAAGTTCGGCAGCGACACCCTCAAACG
AGAGTTGTTGCGCGACTTCCTCACCGAGCGTGCCAGCACCTGCCTGCTCTACAGCGAACCCGGTGCCGGCTCGGACCTCG
CCGGGGTGCACGCCACCGCGGTGCGCGACGGTGACCAGTGGGTGGTCAACGGCCAGAAGGTGTGGACCTCGGGGGCGGCG
ACGGCCGACTACGGGCTGCTGCTCGCCCGCACCGACTGGGATGTGCCGAAGCACAAGGGTCTGAGCTTCTTCATTCTGCC
GATGAAACAACCCGGCATCGAGGTCAGGCCGCTGGTGCAGATCACCGGCGAATCCCACTTCAACGAGGTGTTCATCAGCG
ATGCCAAGGTGGGCGACGACTTCCTCGTCGGCGGTACCGGCAACGGCTGGCGGGTGCTGCAGACCGCGCTGGCCTACGAA
CGGTCCATCATGGGCGACAGCGGCCGCGGCTCGCGCAACAGTTCGCGCGCCGACAGCCTCGTCGAACTCGCCCGCGAACA
CGGCCGCCTCGACGACCCGGTCATCCGCGATTCGCTGGCCACGGTGCTCGCATTGCGAGAACTGAACCGGCTCAACAACG
CTCGCGCGAAGGCGTCGACGTCGATCGGCACGTCGAGCTCAATCATGTCGCTGGGCAAGCTGGCCATGTCGGACATCCTG
CACACCGAGGCGCGGGTGAAGACCGACATCATCGGGGCCGAGGCGCTGCTGGCCGGACCGGACCACCCGGAGGCCGACGA
CATCAACTTCCTGACGCTCAACGCCTACTTCACCTCCATCGGCGGCGGCACGGATCAGATCCAGCGCAACATCATCGGCG
AGCGGGTCCTCGGGCTGCCCAAGGAACCCGAAGTCGACCGCGACATCGCGTTCCGCGACGCGCGCCGGAACTGA

Upstream 100 bases:

>100_bases
GGCGCATCTGTACCTCCGCCGGGCCCGCACCGGGCTGCAGTTGTTCGGCGGCCCACGCCTGCATCGCGAGCGTTACCTCC
AGTCGAAAGGCGCCTGACCC

Downstream 100 bases:

>100_bases
TCGATGAGCGACGCGTACGACCCGCCGCTGGCGGGCATCCGGATCCTCGACCTGTCGTCGGGTCCGATGACCGCGATCGG
GCGCCTGCTGGCCGATCTCG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTETTPSADELRAEVRAWLEHNWKGLPKSTDPWVASPERVAWLEKVLDAGYAVPTYPTEWFGREYPNHLASAIEKEFKAV
RAPGARRDKYSIPANTVLKFGSDTLKRELLRDFLTERASTCLLYSEPGAGSDLAGVHATAVRDGDQWVVNGQKVWTSGAA
TADYGLLLARTDWDVPKHKGLSFFILPMKQPGIEVRPLVQITGESHFNEVFISDAKVGDDFLVGGTGNGWRVLQTALAYE
RSIMGDSGRGSRNSSRADSLVELAREHGRLDDPVIRDSLATVLALRELNRLNNARAKASTSIGTSSSIMSLGKLAMSDIL
HTEARVKTDIIGAEALLAGPDHPEADDINFLTLNAYFTSIGGGTDQIQRNIIGERVLGLPKEPEVDRDIAFRDARRN

Sequences:

>Translated_397_residues
MTETTPSADELRAEVRAWLEHNWKGLPKSTDPWVASPERVAWLEKVLDAGYAVPTYPTEWFGREYPNHLASAIEKEFKAV
RAPGARRDKYSIPANTVLKFGSDTLKRELLRDFLTERASTCLLYSEPGAGSDLAGVHATAVRDGDQWVVNGQKVWTSGAA
TADYGLLLARTDWDVPKHKGLSFFILPMKQPGIEVRPLVQITGESHFNEVFISDAKVGDDFLVGGTGNGWRVLQTALAYE
RSIMGDSGRGSRNSSRADSLVELAREHGRLDDPVIRDSLATVLALRELNRLNNARAKASTSIGTSSSIMSLGKLAMSDIL
HTEARVKTDIIGAEALLAGPDHPEADDINFLTLNAYFTSIGGGTDQIQRNIIGERVLGLPKEPEVDRDIAFRDARRN
>Mature_396_residues
TETTPSADELRAEVRAWLEHNWKGLPKSTDPWVASPERVAWLEKVLDAGYAVPTYPTEWFGREYPNHLASAIEKEFKAVR
APGARRDKYSIPANTVLKFGSDTLKRELLRDFLTERASTCLLYSEPGAGSDLAGVHATAVRDGDQWVVNGQKVWTSGAAT
ADYGLLLARTDWDVPKHKGLSFFILPMKQPGIEVRPLVQITGESHFNEVFISDAKVGDDFLVGGTGNGWRVLQTALAYER
SIMGDSGRGSRNSSRADSLVELAREHGRLDDPVIRDSLATVLALRELNRLNNARAKASTSIGTSSSIMSLGKLAMSDILH
TEARVKTDIIGAEALLAGPDHPEADDINFLTLNAYFTSIGGGTDQIQRNIIGERVLGLPKEPEVDRDIAFRDARRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557231, Length=281, Percent_Identity=28.4697508896797, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI187960098, Length=281, Percent_Identity=28.4697508896797, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI4557233, Length=291, Percent_Identity=28.5223367697594, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4501857, Length=180, Percent_Identity=27.2222222222222, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI38505218, Length=147, Percent_Identity=29.9319727891156, Blast_Score=72, Evalue=9e-13,
Organism=Homo sapiens, GI226958412, Length=171, Percent_Identity=27.4853801169591, Blast_Score=69, Evalue=1e-11,
Organism=Homo sapiens, GI226958414, Length=171, Percent_Identity=27.4853801169591, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081958, Length=290, Percent_Identity=24.1379310344828, Blast_Score=68, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17534899, Length=297, Percent_Identity=27.9461279461279, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17538396, Length=347, Percent_Identity=24.4956772334294, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=167, Percent_Identity=28.7425149700599, Blast_Score=78, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17570075, Length=391, Percent_Identity=24.0409207161125, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17569725, Length=287, Percent_Identity=25.4355400696864, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=199, Percent_Identity=25.6281407035176, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24660351, Length=286, Percent_Identity=25.8741258741259, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI21356377, Length=296, Percent_Identity=27.7027027027027, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21355753, Length=322, Percent_Identity=24.8447204968944, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24646207, Length=297, Percent_Identity=25.2525252525253, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 43594; Mature: 43463

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTETTPSADELRAEVRAWLEHNWKGLPKSTDPWVASPERVAWLEKVLDAGYAVPTYPTEW
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
FGREYPNHLASAIEKEFKAVRAPGARRDKYSIPANTVLKFGSDTLKRELLRDFLTERAST
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCE
CLLYSEPGAGSDLAGVHATAVRDGDQWVVNGQKVWTSGAATADYGLLLARTDWDVPKHKG
EEEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCCC
LSFFILPMKQPGIEVRPLVQITGESHFNEVFISDAKVGDDFLVGGTGNGWRVLQTALAYE
CEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHH
RSIMGDSGRGSRNSSRADSLVELAREHGRLDDPVIRDSLATVLALRELNRLNNARAKAST
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SIGTSSSIMSLGKLAMSDILHTEARVKTDIIGAEALLAGPDHPEADDINFLTLNAYFTSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCEEEEEEEEHHC
GGGTDQIQRNIIGERVLGLPKEPEVDRDIAFRDARRN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure 
TETTPSADELRAEVRAWLEHNWKGLPKSTDPWVASPERVAWLEKVLDAGYAVPTYPTEW
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHH
FGREYPNHLASAIEKEFKAVRAPGARRDKYSIPANTVLKFGSDTLKRELLRDFLTERAST
HCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHCE
CLLYSEPGAGSDLAGVHATAVRDGDQWVVNGQKVWTSGAATADYGLLLARTDWDVPKHKG
EEEEECCCCCCCCCCCEEEEEECCCEEEECCCEEEECCCCCCCCCEEEEECCCCCCCCCC
LSFFILPMKQPGIEVRPLVQITGESHFNEVFISDAKVGDDFLVGGTGNGWRVLQTALAYE
CEEEEEECCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCEEECCCCCCHHHHHHHHHHH
RSIMGDSGRGSRNSSRADSLVELAREHGRLDDPVIRDSLATVLALRELNRLNNARAKAST
HHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
SIGTSSSIMSLGKLAMSDILHTEARVKTDIIGAEALLAGPDHPEADDINFLTLNAYFTSI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCEEEEEEEEHHC
GGGTDQIQRNIIGERVLGLPKEPEVDRDIAFRDARRN
CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]