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The map label for this gene is dadA [H]

Identifier: 119871349

GI number: 119871349

Start: 5559201

End: 5560454

Strand: Direct

Name: dadA [H]

Synonym: Mkms_5323

Alternate gene names: 119871349

Gene position: 5559201-5560454 (Clockwise)

Preceding gene: 119871348

Following gene: 119871350

Centisome position: 96.9

GC content: 73.52

Gene sequence:

>1254_bases
ATGTTCGGCGGTGACGGAGTCGACGGCGGACCCCGATCGGTGATCGTGGTGGGCGCCGGCATCGTCGGCCTGTCCACCGC
CTGGTTCCTGCAGGAGCGCGGCGTCGAGGTGACGGTGGTCGACCGCGGCGGGGTGGCCGCGGGCGCGTCCTGGGGTAACG
CCGGCTGGGTGTCCCCGGCGCTGACGATTCCCCTCAACCAGCCGTCGGTGCTGGGCTACGGGCTGCGGTCGCTGGCGAAC
CCGGCCGCACCGCTGCACGTCCCCGCCCGCGCCGACATCGGGCTGTGGTCGTTCCTCACCCGGTTCGCGGCCAACTGCCG
GCGCTCGTCGTGGGACCGCGCGGTCGCCGCCAACCTGCCGTTCAACGCCGAATGCCTCGAAGCGTTCGACGTGCTGACCG
GCAACGGGGTCGACGTACCGACCACCGACTGTCCGATCACCGCGGTGTTCACCTCCGAACGGCAGGCCGCGCACCTGCTC
GACGAACTGCGCGCCTTGCAGCAGGCGGGTCAGGACGTGTCCTACCGCCGCCTCACCCTCGATGAGCTCGAGGATCAGGT
GCCACTGGCGTCGCGGGCGGTGACGGTCGGCGTCAGCGTCGAGGATCAGCGGTTCGTCGATCCGGGGCGGTTCACCCACG
CGCTGGCCCGGGCGGTCGTGGCGCGCGGGGCGACGATCGGCGAGGTCGACGTCGTCGACCTGCTGCCCCACCGGCGAGGG
GTCCGGGTCTACCCCCGGACCGGCGCACCGCTGACCGCCGACGCCGCGGTGATCGCCACCGGCGCCTGGATCTCTGCGCT
CGCCGACCGGTGGGTCCGCACACCGGTGCGCGCCGGGCGCGGCTACTCGTTCACCGTGCCCGTCGACCGTCCGGTGCCGG
GTCCGATCTATCTGCCCGAGGTGCGGGTGGCGTGCACGCCCTACCGGGGGGCGCTGCGCGTCGCGGGCACCATGGAATTC
CGCGGCCCGGACGAACCGGCGATCCCGGCCCGCGTCGAGGCGATCGTCGGTTCGACCGCACCGCTGTTCGACGGTGTGCG
CTGGGGTGAGCGCACCGACGAGTGGGTGGGTCCTCGGCCCGTCACCCCCGACGGCCGGCCGCTGATCGGAAACGTCGACC
GCAATGTGTACGTCGCGGGCGGCCACGGGATGTGGGGGCTGGCGCACGGCCCCGTCACCGGCCGCCTGCTGGCCGAGCAG
ATCACCACCGGTAAGCAACCCGAGGCGCTGCGGGCCGTCGACCCGCTGCGCTGA

Upstream 100 bases:

>100_bases
GCCGACAAAATTTCGTGACCGTGTTGTCCCGAGCGGGCAACCGCCGGACGCCGAACACCGCCATCATCGGTGGGGACAGG
AGTCCAGTGGAGGTGGCGTG

Downstream 100 bases:

>100_bases
CCACAGACCGGCATCGAGTCGTCAGGGGCGGCGCATCGGCCCGCCCCTGACGACGATTCCCGCTTTCTCGAGGAGGACCC
ATGACGACAGCACAGCGTGT

Product: D-amino-acid dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MFGGDGVDGGPRSVIVVGAGIVGLSTAWFLQERGVEVTVVDRGGVAAGASWGNAGWVSPALTIPLNQPSVLGYGLRSLAN
PAAPLHVPARADIGLWSFLTRFAANCRRSSWDRAVAANLPFNAECLEAFDVLTGNGVDVPTTDCPITAVFTSERQAAHLL
DELRALQQAGQDVSYRRLTLDELEDQVPLASRAVTVGVSVEDQRFVDPGRFTHALARAVVARGATIGEVDVVDLLPHRRG
VRVYPRTGAPLTADAAVIATGAWISALADRWVRTPVRAGRGYSFTVPVDRPVPGPIYLPEVRVACTPYRGALRVAGTMEF
RGPDEPAIPARVEAIVGSTAPLFDGVRWGERTDEWVGPRPVTPDGRPLIGNVDRNVYVAGGHGMWGLAHGPVTGRLLAEQ
ITTGKQPEALRAVDPLR

Sequences:

>Translated_417_residues
MFGGDGVDGGPRSVIVVGAGIVGLSTAWFLQERGVEVTVVDRGGVAAGASWGNAGWVSPALTIPLNQPSVLGYGLRSLAN
PAAPLHVPARADIGLWSFLTRFAANCRRSSWDRAVAANLPFNAECLEAFDVLTGNGVDVPTTDCPITAVFTSERQAAHLL
DELRALQQAGQDVSYRRLTLDELEDQVPLASRAVTVGVSVEDQRFVDPGRFTHALARAVVARGATIGEVDVVDLLPHRRG
VRVYPRTGAPLTADAAVIATGAWISALADRWVRTPVRAGRGYSFTVPVDRPVPGPIYLPEVRVACTPYRGALRVAGTMEF
RGPDEPAIPARVEAIVGSTAPLFDGVRWGERTDEWVGPRPVTPDGRPLIGNVDRNVYVAGGHGMWGLAHGPVTGRLLAEQ
ITTGKQPEALRAVDPLR
>Mature_417_residues
MFGGDGVDGGPRSVIVVGAGIVGLSTAWFLQERGVEVTVVDRGGVAAGASWGNAGWVSPALTIPLNQPSVLGYGLRSLAN
PAAPLHVPARADIGLWSFLTRFAANCRRSSWDRAVAANLPFNAECLEAFDVLTGNGVDVPTTDCPITAVFTSERQAAHLL
DELRALQQAGQDVSYRRLTLDELEDQVPLASRAVTVGVSVEDQRFVDPGRFTHALARAVVARGATIGEVDVVDLLPHRRG
VRVYPRTGAPLTADAAVIATGAWISALADRWVRTPVRAGRGYSFTVPVDRPVPGPIYLPEVRVACTPYRGALRVAGTMEF
RGPDEPAIPARVEAIVGSTAPLFDGVRWGERTDEWVGPRPVTPDGRPLIGNVDRNVYVAGGHGMWGLAHGPVTGRLLAEQ
ITTGKQPEALRAVDPLR

Specific function: Oxidative deamination of D-amino acids [H]

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787438, Length=407, Percent_Identity=28.009828009828, Blast_Score=124, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023080
- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: =1.4.99.1 [H]

Molecular weight: Translated: 44338; Mature: 44338

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGGDGVDGGPRSVIVVGAGIVGLSTAWFLQERGVEVTVVDRGGVAAGASWGNAGWVSPA
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCE
LTIPLNQPSVLGYGLRSLANPAAPLHVPARADIGLWSFLTRFAANCRRSSWDRAVAANLP
EEEECCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
FNAECLEAFDVLTGNGVDVPTTDCPITAVFTSERQAAHLLDELRALQQAGQDVSYRRLTL
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEH
DELEDQVPLASRAVTVGVSVEDQRFVDPGRFTHALARAVVARGATIGEVDVVDLLPHRRG
HHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCC
VRVYPRTGAPLTADAAVIATGAWISALADRWVRTPVRAGRGYSFTVPVDRPVPGPIYLPE
CEEECCCCCCCCCCHHHEEHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCCCCEECCC
VRVACTPYRGALRVAGTMEFRGPDEPAIPARVEAIVGSTAPLFDGVRWGERTDEWVGPRP
EEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC
VTPDGRPLIGNVDRNVYVAGGHGMWGLAHGPVTGRLLAEQITTGKQPEALRAVDPLR
CCCCCCEEEECCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCC
>Mature Secondary Structure
MFGGDGVDGGPRSVIVVGAGIVGLSTAWFLQERGVEVTVVDRGGVAAGASWGNAGWVSPA
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCEEECCCCCCCCCCCCE
LTIPLNQPSVLGYGLRSLANPAAPLHVPARADIGLWSFLTRFAANCRRSSWDRAVAANLP
EEEECCCCCHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
FNAECLEAFDVLTGNGVDVPTTDCPITAVFTSERQAAHLLDELRALQQAGQDVSYRRLTL
CCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEEH
DELEDQVPLASRAVTVGVSVEDQRFVDPGRFTHALARAVVARGATIGEVDVVDLLPHRRG
HHHHCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEHHHHCCCCCC
VRVYPRTGAPLTADAAVIATGAWISALADRWVRTPVRAGRGYSFTVPVDRPVPGPIYLPE
CEEECCCCCCCCCCHHHEEHHHHHHHHHHHHHHCHHHCCCCEEEEEECCCCCCCCEECCC
VRVACTPYRGALRVAGTMEFRGPDEPAIPARVEAIVGSTAPLFDGVRWGERTDEWVGPRP
EEEEECCCCCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCC
VTPDGRPLIGNVDRNVYVAGGHGMWGLAHGPVTGRLLAEQITTGKQPEALRAVDPLR
CCCCCCEEEECCCCEEEEECCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA