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The map label for this gene is crtI [H]

Identifier: 119871190

GI number: 119871190

Start: 5411619

End: 5413157

Strand: Direct

Name: crtI [H]

Synonym: Mkms_5163

Alternate gene names: 119871190

Gene position: 5411619-5413157 (Clockwise)

Preceding gene: 119871189

Following gene: 119871191

Centisome position: 94.32

GC content: 71.02

Gene sequence:

>1539_bases
ATGCGCACCGTCGGGGGGCGAACAGACCGCGTGGTGGTCGTCGGCGCCGGATTGTCCGGCCTGTCGGCCGCACTACAGCT
GGCCGGGCGCGGCCGCACCGTCACGGTGCTCGAACGCGAGACGTTCCCGGGCGGCCGGATGGGCCGGCTCGACATCGACG
GGTACCGGCTCGACACCGGGCCGACCGTGTTGACGATGCCCGACATCATCGAGGACGCCTTCGCCGCCGTGGGCGATTCG
ATGACCGGGCGCCTCGAACTCGACCGCGTCGACCCGGCCTATCACGCGTCGTTCGCCGACGGCAGCGGCCTGTACGTGCA
CACCGATGCCACTGCGATGGCCTCCGAGATCGAACGCTTCGCCGGCTCCGACGCCGCCGACGGCTATCTGCGGCTGCGCA
CCTGGCTGACCCGGCTGTACCAGGCCGAGTTCAACGGTTTCATCGCCTCCAACTTCGATTCACCGCTGTCCCTCGTGACA
CCCCAGCTGGCCCGGCTGGCCGCGATGGGCGGTTTCCGGCGGTGGGATCGCGTGGTGCGCAACTACATTGCCGACGAACG
GCTGCGCCGCATCTTCACCTTCCAGGCCCTCTACGCCGGCGTGCCACCACACAAGGCGCTGGCCGCCTACGCGGTGATCG
CCTACATGGACACCGTGGCGGGGGTCTACTTCCCCCGCGGCGGCATGCGCGCCGTACCGGATGCGATGGCGGCCGCCGCC
GCCGACGCCGGAGTCGAATTCCGTTACGGTTCAGCGGTTTCCGTCCTCGAACGCAGCGCAGACGGCCGGGTGACGGCGGT
GCGCACCGACGCGGGTGACCGCATCCCCACCGACGCCGTCGTCCTCACCACGGAATTGCCGACGACCTATCGCCTGCTCG
GCCGCACACCGCGGCGCCTGCTGCCGCTGCGGCCTGCGCCGTCGGCGGTGGTGGCACATGTCGGGTGCGCCAAGGTGGAT
CCCGGCGGGGATGTCGTGGCGCACCACAACATCCTGTTCGGCGGCGCCTGGGAGCAGACGTTCCGCGACATCATCGACGA
GGGACGGGTGATGAGCGATCCCTCGCTGCTGGTCACCCGGCCCACCGCCGGCGACCCGAGCCTCGCACCACCGGGTCGCG
ATCTGCTCTACGTGCTGGCGCCCGCACCGAACAAGGCCGTGGGACACGTCGACTGGTCTCAGACGAGCGACGCCTATGTC
GAGGGGATGCTGGCCACGGTGCGCCGGCGGATGCCCGCGGTCGGCGACGACCTCGAACTGCTGCACGTCGTGGACCCCGA
CGGGTGGGCCCGCCAGGACATGGCGGCGGGCACCCCGTTCGCGTTGGCGCACACCTTCGGCCAGACCGGCCCGTTCCGGC
CCGCGAACACGATTCGCGGCGCCGAGAACGTCGTGCTGGCCGGATCGTCCACGGTCCCCGGCGTCGGGGTGCCGACCGCG
TTGCTGTCCGGCCGGTTGGCCGCAGATCGAATCACCGGGACCGTCGCGTCGTCCAACCCGACGGCGGCCCCGACCAGAAC
GAGGAGCGGGCTGTCATGA

Upstream 100 bases:

>100_bases
AGCCCACTCGACGACACCGTCAGAACCGCACTGGTCAACATGGCCGCCGTATGCACCCGGCGGGCAGCGTGACCGGCAAA
CAGTCAGGAGAATCGAACTG

Downstream 100 bases:

>100_bases
TCGGATCCGAACTCGACGCCGCCGGGGTCCGCGACCCCGCGCTGCGCAACGCCTACCGCTGCTGCCGTGTGCTCAACGCC
GAACACGGCCGGACCTTCTA

Product: phytoene dehydrogenase-like protein

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MRTVGGRTDRVVVVGAGLSGLSAALQLAGRGRTVTVLERETFPGGRMGRLDIDGYRLDTGPTVLTMPDIIEDAFAAVGDS
MTGRLELDRVDPAYHASFADGSGLYVHTDATAMASEIERFAGSDAADGYLRLRTWLTRLYQAEFNGFIASNFDSPLSLVT
PQLARLAAMGGFRRWDRVVRNYIADERLRRIFTFQALYAGVPPHKALAAYAVIAYMDTVAGVYFPRGGMRAVPDAMAAAA
ADAGVEFRYGSAVSVLERSADGRVTAVRTDAGDRIPTDAVVLTTELPTTYRLLGRTPRRLLPLRPAPSAVVAHVGCAKVD
PGGDVVAHHNILFGGAWEQTFRDIIDEGRVMSDPSLLVTRPTAGDPSLAPPGRDLLYVLAPAPNKAVGHVDWSQTSDAYV
EGMLATVRRRMPAVGDDLELLHVVDPDGWARQDMAAGTPFALAHTFGQTGPFRPANTIRGAENVVLAGSSTVPGVGVPTA
LLSGRLAADRITGTVASSNPTAAPTRTRSGLS

Sequences:

>Translated_512_residues
MRTVGGRTDRVVVVGAGLSGLSAALQLAGRGRTVTVLERETFPGGRMGRLDIDGYRLDTGPTVLTMPDIIEDAFAAVGDS
MTGRLELDRVDPAYHASFADGSGLYVHTDATAMASEIERFAGSDAADGYLRLRTWLTRLYQAEFNGFIASNFDSPLSLVT
PQLARLAAMGGFRRWDRVVRNYIADERLRRIFTFQALYAGVPPHKALAAYAVIAYMDTVAGVYFPRGGMRAVPDAMAAAA
ADAGVEFRYGSAVSVLERSADGRVTAVRTDAGDRIPTDAVVLTTELPTTYRLLGRTPRRLLPLRPAPSAVVAHVGCAKVD
PGGDVVAHHNILFGGAWEQTFRDIIDEGRVMSDPSLLVTRPTAGDPSLAPPGRDLLYVLAPAPNKAVGHVDWSQTSDAYV
EGMLATVRRRMPAVGDDLELLHVVDPDGWARQDMAAGTPFALAHTFGQTGPFRPANTIRGAENVVLAGSSTVPGVGVPTA
LLSGRLAADRITGTVASSNPTAAPTRTRSGLS
>Mature_512_residues
MRTVGGRTDRVVVVGAGLSGLSAALQLAGRGRTVTVLERETFPGGRMGRLDIDGYRLDTGPTVLTMPDIIEDAFAAVGDS
MTGRLELDRVDPAYHASFADGSGLYVHTDATAMASEIERFAGSDAADGYLRLRTWLTRLYQAEFNGFIASNFDSPLSLVT
PQLARLAAMGGFRRWDRVVRNYIADERLRRIFTFQALYAGVPPHKALAAYAVIAYMDTVAGVYFPRGGMRAVPDAMAAAA
ADAGVEFRYGSAVSVLERSADGRVTAVRTDAGDRIPTDAVVLTTELPTTYRLLGRTPRRLLPLRPAPSAVVAHVGCAKVD
PGGDVVAHHNILFGGAWEQTFRDIIDEGRVMSDPSLLVTRPTAGDPSLAPPGRDLLYVLAPAPNKAVGHVDWSQTSDAYV
EGMLATVRRRMPAVGDDLELLHVVDPDGWARQDMAAGTPFALAHTFGQTGPFRPANTIRGAENVVLAGSSTVPGVGVPTA
LLSGRLAADRITGTVASSNPTAAPTRTRSGLS

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54381; Mature: 54381

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVGGRTDRVVVVGAGLSGLSAALQLAGRGRTVTVLERETFPGGRMGRLDIDGYRLDTG
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCEEECCC
PTVLTMPDIIEDAFAAVGDSMTGRLELDRVDPAYHASFADGSGLYVHTDATAMASEIERF
CEEEECHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCEEEEECHHHHHHHHHHH
AGSDAADGYLRLRTWLTRLYQAEFNGFIASNFDSPLSLVTPQLARLAAMGGFRRWDRVVR
CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
NYIADERLRRIFTFQALYAGVPPHKALAAYAVIAYMDTVAGVYFPRGGMRAVPDAMAAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
ADAGVEFRYGSAVSVLERSADGRVTAVRTDAGDRIPTDAVVLTTELPTTYRLLGRTPRRL
HHCCCEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCHHHH
LPLRPAPSAVVAHVGCAKVDPGGDVVAHHNILFGGAWEQTFRDIIDEGRVMSDPSLLVTR
CCCCCCCHHHHHCCCCEEECCCCCEEEECCEEECCCHHHHHHHHHHCCCEECCCCEEEEC
PTAGDPSLAPPGRDLLYVLAPAPNKAVGHVDWSQTSDAYVEGMLATVRRRMPAVGDDLEL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE
LHVVDPDGWARQDMAAGTPFALAHTFGQTGPFRPANTIRGAENVVLAGSSTVPGVGVPTA
EEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCHH
LLSGRLAADRITGTVASSNPTAAPTRTRSGLS
HHCCCHHHHHHEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRTVGGRTDRVVVVGAGLSGLSAALQLAGRGRTVTVLERETFPGGRMGRLDIDGYRLDTG
CCCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEECCCEEECCC
PTVLTMPDIIEDAFAAVGDSMTGRLELDRVDPAYHASFADGSGLYVHTDATAMASEIERF
CEEEECHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCCCCCCCEEEEECHHHHHHHHHHH
AGSDAADGYLRLRTWLTRLYQAEFNGFIASNFDSPLSLVTPQLARLAAMGGFRRWDRVVR
CCCCCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH
NYIADERLRRIFTFQALYAGVPPHKALAAYAVIAYMDTVAGVYFPRGGMRAVPDAMAAAA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHHHHHHH
ADAGVEFRYGSAVSVLERSADGRVTAVRTDAGDRIPTDAVVLTTELPTTYRLLGRTPRRL
HHCCCEEECCCHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCHHHHHHCCCHHHH
LPLRPAPSAVVAHVGCAKVDPGGDVVAHHNILFGGAWEQTFRDIIDEGRVMSDPSLLVTR
CCCCCCCHHHHHCCCCEEECCCCCEEEECCEEECCCHHHHHHHHHHCCCEECCCCEEEEC
PTAGDPSLAPPGRDLLYVLAPAPNKAVGHVDWSQTSDAYVEGMLATVRRRMPAVGDDLEL
CCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEE
LHVVDPDGWARQDMAAGTPFALAHTFGQTGPFRPANTIRGAENVVLAGSSTVPGVGVPTA
EEEECCCCCCHHHHCCCCCHHHHHHHCCCCCCCCCHHCCCCCCEEEECCCCCCCCCCCHH
LLSGRLAADRITGTVASSNPTAAPTRTRSGLS
HHCCCHHHHHHEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]