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The map label for this gene is lytR [H]

Identifier: 119871153

GI number: 119871153

Start: 5375732

End: 5376667

Strand: Direct

Name: lytR [H]

Synonym: Mkms_5126

Alternate gene names: 119871153

Gene position: 5375732-5376667 (Clockwise)

Preceding gene: 119871151

Following gene: 119871154

Centisome position: 93.7

GC content: 72.12

Gene sequence:

>936_bases
ATGGCCGTCCTGCTTGTCATGGTGGTGTCGCTGGTCGGCCTGACCGTGTGGGTCGACACGTCACTGCAGCGCATCCCCGC
CCTGGCCGCCTATCCCGACCGGCCGGCCGCCGGTCGCGGCACCACCTGGCTGCTGGTCGGCTCCGACAGCCGCGCCGGCC
TCGACGCCGAACAGCAGGCCCAGCTCGCCACCGGCGGTGACGTCGGCAACGGACGCACCGACACGATCATGCTCGTCCAC
CTCCCCGGCCTGACCTCGAGCGCACCCGCGACCATGGTGTCGATCCCGCGCGACTCCTATGTGCCGATCCCCGGGTACGG
CGAGGACAAGATCAACGCCGCATTCGCGCTGGGCGGCGCGCCGCTGCTCGCCCAGACCGTCGAGCAGGCCACCGGTATGC
GCCTCGACCACTACGCCGAGGTCGGATTCGACGGGTTCGCCTCGGTCGTCGACGCCGTCGGCGGCGTGACGATGTGCCCG
GCGGAGCCCATCAACGATCCGCTGGCCGGGATCGACCTGCCCGCCGGATGTCAGGAACTCGACGGGCGCAATGCGCTCGG
CTTCGTGCGCACTCGCGCCACCCCGCGCGCCGACCTGGACCGGATGACCCACCAGCGGGAGTTCATGTCCGCGCTGCTGC
ATCGCGCGGCCAGCCCGGCGGTCCTGCTCAACCCGCTGCGCTGGTATCCGATGGCGAGCGCGGCCGGCGGCGCACTGACC
GTCGACACCGGTGCGCACGTTTGGGATCTCGCCCGGCTCGGCTGGGCGCTGCGCGGTGATCTGACCACCACGACGGTGCC
CATCGGGGAGTTCACCGACGGCGGTGCCGGCGCCGTCGTGGTCTGGGACAGCGAGGCCGCCGGACGCCTCTTCGACGCGC
TGTCAACCGACACGCCGATCCCCGCCGACGTGCTCGACACCACACCGGGCGGCTGA

Upstream 100 bases:

>100_bases
ACCACCACCGCCGCGGCCGCCCACCCGCTCGCCGGTCCGGCCCCCCGGTCCGCCCGCCGCCGCCCGGCCTCGCCGGAAAC
GCCACTGGGGCCGAATCATC

Downstream 100 bases:

>100_bases
GGGCCGCCTGTCCTCAGCAAATGCGGCCGAAACTGTTGCCACCGTCACAAATCGACGGCTCCCCGTTAGGAAACCCTTCC
CTCAGTAAGGTCCTCCTTCA

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MAVLLVMVVSLVGLTVWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIMLVH
LPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHYAEVGFDGFASVVDAVGGVTMCP
AEPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALT
VDTGAHVWDLARLGWALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTPGG

Sequences:

>Translated_311_residues
MAVLLVMVVSLVGLTVWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIMLVH
LPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHYAEVGFDGFASVVDAVGGVTMCP
AEPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALT
VDTGAHVWDLARLGWALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTPGG
>Mature_310_residues
AVLLVMVVSLVGLTVWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQAQLATGGDVGNGRTDTIMLVHL
PGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGAPLLAQTVEQATGMRLDHYAEVGFDGFASVVDAVGGVTMCPA
EPINDPLAGIDLPAGCQELDGRNALGFVRTRATPRADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALTV
DTGAHVWDLARLGWALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPIPADVLDTTPGG

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 32296; Mature: 32165

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVLLVMVVSLVGLTVWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQA
CHHHHHHHHHHHHHHEEECCHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
QLATGGDVGNGRTDTIMLVHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGA
HHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
PLLAQTVEQATGMRLDHYAEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQEL
HHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHC
DGRNALGFVRTRATPRADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALT
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCEEE
VDTGAHVWDLARLGWALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPI
ECCCCHHHHHHHHCHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCC
PADVLDTTPGG
CHHHCCCCCCC
>Mature Secondary Structure 
AVLLVMVVSLVGLTVWVDTSLQRIPALAAYPDRPAAGRGTTWLLVGSDSRAGLDAEQQA
HHHHHHHHHHHHHHEEECCHHHHCCHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
QLATGGDVGNGRTDTIMLVHLPGLTSSAPATMVSIPRDSYVPIPGYGEDKINAAFALGGA
HHHCCCCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC
PLLAQTVEQATGMRLDHYAEVGFDGFASVVDAVGGVTMCPAEPINDPLAGIDLPAGCQEL
HHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCHHHC
DGRNALGFVRTRATPRADLDRMTHQREFMSALLHRAASPAVLLNPLRWYPMASAAGGALT
CCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHCCCCCCCCCCEEE
VDTGAHVWDLARLGWALRGDLTTTTVPIGEFTDGGAGAVVVWDSEAAGRLFDALSTDTPI
ECCCCHHHHHHHHCHHHCCCCEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCC
PADVLDTTPGG
CHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12235376 [H]