| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871151
Identifier: 119871151
GI number: 119871151
Start: 5374555
End: 5375334
Strand: Direct
Name: 119871151
Synonym: Mkms_5124
Alternate gene names: NA
Gene position: 5374555-5375334 (Clockwise)
Preceding gene: 119871150
Following gene: 119871153
Centisome position: 93.68
GC content: 70.13
Gene sequence:
>780_bases GTGAGCCGGCCGTCCGACGAGTTGCCCGACCTGCTGGACCACGGACAACGCCGTGCGATCCGCATCGAGATCGCCATCGT TCTGGCCGTCACGTTCGGCCTCAGCGCGTACACCGCGCTGCTGCGCCTGCTCGAGGCCGTCCTGCTCGGCCTGTCCGGTC AGGTGGTGGCGCTCAACCCGCGTCGGTCCACCTACGACCTGCTCGACCTCGGACTGAACCTCGCCGGGGTCTTCCAGCTC CTGGCCTGGGGCGCGCTCGGCGTGTACCTGTTGTGGCGCAGCGGATTCCGCTTGCCCGACATCGGCCTGGCCCGCCCACG GATGCGCCCCGACCTGCTCGGCGGGCTCGGGCTGGCCGTGCTCATCGGACTGCCCGGGCTCGCGTTCTACCAGCTCGCCC GCGTCCTGGGGATCAACGCCTCGGTCGAACCCGCCGAGCTCTACGACACCTGGTGGCGCATCCCGGTGCTGCTGGCCATG TCGTTCGCCAACGGCTGGGCCGAGGAGATCATCGTCGTCGGGTTCCTTCTGACCCGGCTGCGGCAGCTGCGCGTCAACCC GGTCGTCGCGATCGTCGCGGCCAGCCTGCTGCGCGGGGCGTACCACCTGTACCAGGGCTTCGGCGCGGGCCTCGGCAACG CGGCCATGGGGCTGGTGTTCGGTTACTACTGGCACCGCACCGGACGGCTGTGGCCGCTGATCATCGCGCACACCCTGATC GACGCGGTGGCGTTCGTCGGATACGCACTGTTGGCCGGCCACCTCGGCTGGCTTCAGTGA
Upstream 100 bases:
>100_bases ACCGGTCTGAGCCAGGCCATCCGGGTGCTCATGGGATGCCCGTTCCTCAACGGCCTGCAGGCCCGCCGCCTCGAGCGCCC CGGCGGCTAGCGTATGGGCG
Downstream 100 bases:
>100_bases TCCGGCGGGTCGGGCACGTACATTTTTCGCTGTGAACCCCAATCGGCCCGTGGGCGGCGGTCCCGACCCGAGACGGCCGA ACCCGCCGCGTGAGCCGTCG
Product: abortive infection protein
Products: NA
Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSRPSDELPDLLDHGQRRAIRIEIAIVLAVTFGLSAYTALLRLLEAVLLGLSGQVVALNPRRSTYDLLDLGLNLAGVFQL LAWGALGVYLLWRSGFRLPDIGLARPRMRPDLLGGLGLAVLIGLPGLAFYQLARVLGINASVEPAELYDTWWRIPVLLAM SFANGWAEEIIVVGFLLTRLRQLRVNPVVAIVAASLLRGAYHLYQGFGAGLGNAAMGLVFGYYWHRTGRLWPLIIAHTLI DAVAFVGYALLAGHLGWLQ
Sequences:
>Translated_259_residues MSRPSDELPDLLDHGQRRAIRIEIAIVLAVTFGLSAYTALLRLLEAVLLGLSGQVVALNPRRSTYDLLDLGLNLAGVFQL LAWGALGVYLLWRSGFRLPDIGLARPRMRPDLLGGLGLAVLIGLPGLAFYQLARVLGINASVEPAELYDTWWRIPVLLAM SFANGWAEEIIVVGFLLTRLRQLRVNPVVAIVAASLLRGAYHLYQGFGAGLGNAAMGLVFGYYWHRTGRLWPLIIAHTLI DAVAFVGYALLAGHLGWLQ >Mature_258_residues SRPSDELPDLLDHGQRRAIRIEIAIVLAVTFGLSAYTALLRLLEAVLLGLSGQVVALNPRRSTYDLLDLGLNLAGVFQLL AWGALGVYLLWRSGFRLPDIGLARPRMRPDLLGGLGLAVLIGLPGLAFYQLARVLGINASVEPAELYDTWWRIPVLLAMS FANGWAEEIIVVGFLLTRLRQLRVNPVVAIVAASLLRGAYHLYQGFGAGLGNAAMGLVFGYYWHRTGRLWPLIIAHTLID AVAFVGYALLAGHLGWLQ
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28302; Mature: 28171
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPSDELPDLLDHGQRRAIRIEIAIVLAVTFGLSAYTALLRLLEAVLLGLSGQVVALNP CCCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RRSTYDLLDLGLNLAGVFQLLAWGALGVYLLWRSGFRLPDIGLARPRMRPDLLGGLGLAV CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH LIGLPGLAFYQLARVLGINASVEPAELYDTWWRIPVLLAMSFANGWAEEIIVVGFLLTRL HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLRVNPVVAIVAASLLRGAYHLYQGFGAGLGNAAMGLVFGYYWHRTGRLWPLIIAHTLI HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH DAVAFVGYALLAGHLGWLQ HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SRPSDELPDLLDHGQRRAIRIEIAIVLAVTFGLSAYTALLRLLEAVLLGLSGQVVALNP CCCCCCHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC RRSTYDLLDLGLNLAGVFQLLAWGALGVYLLWRSGFRLPDIGLARPRMRPDLLGGLGLAV CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH LIGLPGLAFYQLARVLGINASVEPAELYDTWWRIPVLLAMSFANGWAEEIIVVGFLLTRL HHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQLRVNPVVAIVAASLLRGAYHLYQGFGAGLGNAAMGLVFGYYWHRTGRLWPLIIAHTLI HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH DAVAFVGYALLAGHLGWLQ HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA