| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871141
Identifier: 119871141
GI number: 119871141
Start: 5365898
End: 5367448
Strand: Direct
Name: 119871141
Synonym: Mkms_5114
Alternate gene names: NA
Gene position: 5365898-5367448 (Clockwise)
Preceding gene: 119871137
Following gene: 119871142
Centisome position: 93.53
GC content: 65.96
Gene sequence:
>1551_bases GTGCAGGTCACCAGCGTCGGACACGCCGGCTTCCGGATCGACACCAAGGCGGGCAGCATCCTGTGCGACCCGTGGGTCAA CCCGGCCTACTTCGCCTCGTGGGTCCCGTTCCCCGACAACACCGGACTCGACTGGGACGCGCTCGGCGACGTCGACTACC TCTACGTCTCCCATCTGCACAAGGACCACTTCGACCCGAAGAACCTGCGCGACCACGTCAACAAGGACGCGGTCGTGCTG CTACCCGACTACCCGGTGCCGGATCTGCGCCGCGAACTCGAGACACTGGGTTTCCACCGGTTCTTCGAGACGACCAATTC GGTCAAACACCGCGTCAGCGGCCCCAAGGGCGACCTCGACGTGATGATCATCGCGCTGCGGGCACCGGCCGACGGGCCGA TCGGGGACTCCGGTCTGGTGGTCGACGACGGTGACACCGTCGCGTTCAACATGAACGATGCGCGGCCCGTCGATCTGGAT GTGCTGGCCGCCGACTTCGGCCGCGTCGACGTGCACATGCTGCAGTTCTCGGGCGCGATCTGGTACCCGATGGTCTACGA CATGCCCGCCCGCGCGAAGGAGGCGTTCGGCACCCAGAAGCGGCAGCGCCAGATGGACCGGTGCCGCCAGTACATCGCGC AGGTCGGGGCCACCTGGGTGATCCCGTCGGCCGGCCCGCCGTGCTTCCTGGACCCCGAACTGCGCCACCTCAACGACGAC CACGGCGACCCGTCGAACATCTTCCCCGACCAGATGGTGTTCCTCGACCAGATGCGCAGGCACGGCCACGACGGCGGCCT GCTGATGATCCCGGGGTCCACCGCTGAATTCACCGGCTCCGTACTCGATTCGCTGACCCACCCGCTGCCCGACGACGAGG TGGAGGCGATCTTCACCACCGGCAAGGCGGACTACCTCGAGGCCTTCGCCCAGCGGATGGCGCCGGTCCTGGCGGCCGAG AAGGCGACGTGGGCGCCGGCCCACGGCGACCCGCTGCTCGAACCCCTGCGGGCGAAGTTCGAACCGATCATGGTGCAGAG CGACCAGATCTGCGACGGCATCGGCTATCCCGTCGAGTTGCGCCTGGGCGCCGAGACGGTGGTACTGGATTTCCCGAAAC GTGTTGTGCGCGAACCTATTCCGGACGAGAAGTTCCGGTATGGATTCGAGATCGCCCCCGAGTTGGTGCGCACCGTGCTC CGCGACGGGGAACCGGACTGGGTCAACACCATCTTCCTGTCCACCCGTTTCCGCGCCTGGCGGGTCGGCGGTTACAACGA GTACCTGTACACGTTCTTCAAATGCCTCACCGACGAACGTGTGGCCTACGCCGACGGGTGGTTCGCCGAGGCGCACGACG ATTCTGCGTCGATCACGATGGGCGGGTACGAGTTCCAGCGACGCTGCCCGCACCTCAAGGCCGATCTGTCGAAGTTCGGT GTGGTCGAGGGCAACACGTTGACCTGCAACCTGCACGGCTGGCAATGGAATCTGGAGAGCGGACGATGCCTGACGACCAA GGGTCACGAACTTCGGACCGGACCGCTGTGA
Upstream 100 bases:
>100_bases GCGGTACACCACCCGACGCGGCGGGCGGTCCGCACCGGCCGCGCCCCTTAGACTGAGGCGACGACGTCATGCGCGCGAAA CCGCGTGCAGGAAGGAAAAT
Downstream 100 bases:
>100_bases GCGCACCGCGGCAGTACTACGACGACGGCCAGATCCAGCTCGACAAGCAGGCGATCACGCTGCGGCGCTACCACTTTCCG TCGGGCACCTCGAAAGTGAT
Product: Rieske (2Fe-2S) domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 516; Mature: 516
Protein sequence:
>516_residues MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLHKDHFDPKNLRDHVNKDAVVL LPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLDVMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLD VLAADFGRVDVHMLQFSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTTGKADYLEAFAQRMAPVLAAE KATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVELRLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVL RDGEPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRTGPL
Sequences:
>Translated_516_residues MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLHKDHFDPKNLRDHVNKDAVVL LPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLDVMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLD VLAADFGRVDVHMLQFSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTTGKADYLEAFAQRMAPVLAAE KATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVELRLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVL RDGEPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRTGPL >Mature_516_residues MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLHKDHFDPKNLRDHVNKDAVVL LPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLDVMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLD VLAADFGRVDVHMLQFSGAIWYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTTGKADYLEAFAQRMAPVLAAE KATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVELRLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVL RDGEPDWVNTIFLSTRFRAWRVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRTGPL
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017941 [H]
Pfam domain/function: PF00355 Rieske [H]
EC number: NA
Molecular weight: Translated: 57925; Mature: 57925
Theoretical pI: Translated: 4.88; Mature: 4.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLH CCCCCCCCCCEEEECCCCCEEECCCCCHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHH KDHFDPKNLRDHVNKDAVVLLPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLD HCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLDVLAADFGRVDVHMLQFSGAI EEEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEECCEE WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD ECCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHCCCC HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTT CCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEC GKADYLEAFAQRMAPVLAAEKATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVEL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHCCCCCCEEE RLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVLRDGEPDWVNTIFLSTRFRAW EECCEEEEEECCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEE RVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG EECCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCEEEECCHHHHHHCCCHHHHHHHCC VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRTGPL EEECCEEEEEEECEEEECCCCCEEECCCCCCCCCCC >Mature Secondary Structure MQVTSVGHAGFRIDTKAGSILCDPWVNPAYFASWVPFPDNTGLDWDALGDVDYLYVSHLH CCCCCCCCCCEEEECCCCCEEECCCCCHHHHEEECCCCCCCCCCCCCCCCCHHHHHHHHH KDHFDPKNLRDHVNKDAVVLLPDYPVPDLRRELETLGFHRFFETTNSVKHRVSGPKGDLD HCCCCHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE VMIIALRAPADGPIGDSGLVVDDGDTVAFNMNDARPVDLDVLAADFGRVDVHMLQFSGAI EEEEEEECCCCCCCCCCCEEEECCCEEEEECCCCCCCCCEEEECCCCCCEEEEEEECCEE WYPMVYDMPARAKEAFGTQKRQRQMDRCRQYIAQVGATWVIPSAGPPCFLDPELRHLNDD ECCEEECCCHHHHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECHHHHHCCCC HGDPSNIFPDQMVFLDQMRRHGHDGGLLMIPGSTAEFTGSVLDSLTHPLPDDEVEAIFTT CCCCCCCCCHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCEEEEEC GKADYLEAFAQRMAPVLAAEKATWAPAHGDPLLEPLRAKFEPIMVQSDQICDGIGYPVEL CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHCCCCCCEEE RLGAETVVLDFPKRVVREPIPDEKFRYGFEIAPELVRTVLRDGEPDWVNTIFLSTRFRAW EECCEEEEEECCHHHHHCCCCCHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCEEE RVGGYNEYLYTFFKCLTDERVAYADGWFAEAHDDSASITMGGYEFQRRCPHLKADLSKFG EECCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCEEEECCHHHHHHCCCHHHHHHHCC VVEGNTLTCNLHGWQWNLESGRCLTTKGHELRTGPL EEECCEEEEEEECEEEECCCCCEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA