| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119871137
Identifier: 119871137
GI number: 119871137
Start: 5361775
End: 5363388
Strand: Direct
Name: 119871137
Synonym: Mkms_5110
Alternate gene names: NA
Gene position: 5361775-5363388 (Clockwise)
Preceding gene: 119871136
Following gene: 119871141
Centisome position: 93.46
GC content: 72.3
Gene sequence:
>1614_bases GTGCTGTCCCGCCGACCTGCGCCGTCGCTCTTCTTCACCGCGATCGCGGCGACGCTCGTGCTCCTCCCGTGGGCGGTCAA CGGTCTGCCCGGTGACGACGACGAGTCCGCCGCCGCCGGCGCCCCGACCTTGACCGAACAGCCCCTTGCGGGGCTCGGCG GCGGGGAGACCATCCGGGAGATCCACCAGGACACGCCCTTCTCCATGGTCGCGCTGACCGCCGAGGACCTGACCGGGACG TCCGCGCGGGTGCGCGCCAAGAAGGACGACGGCTCATGGGGGCCGTGGTACGAGGCCGAACCGCTCGAGGGCGTCGGCGA GGAGACCGCCGCACGGCGCGGCACCGACCCGGTGTTCGTCGGGCGCACCACCACCGTCCAGATCGCCGTGACCAGACCGG CCGACGCACCCCCGAGCGCCCCCGCCCCCGCCGAACACCGGGGGCCCGACCTCGGATACCTGCCCGCCACCGTCGAGCAG CCGTTCGCCCAGAACATCAACGCGGTGCTGATCAGTCCGCCGCAGGCGCCGGGAGACACGCTGCCGCTGCCCAACGCCGT GATGGCCCCCGGCGTGCCGCCGCGCATCATCACCCGCGGACAGTGGGGCGCCGACGAATCGATGCGGTGCGGAGGCCCGC GCTACGACGCCGCCGTCCGCGCCGGCGTCGTGCACCACACCGCGGGCAGCAACGACTACGCGCCCGAGGATTCGGCCGGA ATGGTCCGCTCGATCTACGAGTACCACACCCGCACGCTGGGCTGGTGCGACCTCGGCTACAACGCCCTGGTCGACAAGTT CGGCCAGGTCTTCGAAGGCCGCGCGGGCGGGATGGACCGCCCGGTCGAGGCCTCCCACACCGGCGGGTTCAACACCGACA CCTGGGGTGTCGCGATGATGGGCAACTTCGAGGTGGTCCCCCCGACCCCCATCCAGCTGCGCACCACCGGCCGGCTGCTG GGCTGGCGACTGGGCCTCGACCGCGTCAATCCGATGGGCACCACGGTGCTCACCAGCGCGGGCGGCTCGTTCACCCACTT CCCGGCCGGCGCGACGCCGACGCTGCCGAGCATCTTCACCCACCGCGACGTCGGCAACACCGAATGCCCCGGCAACGCCG CATACGCCGCGATGGGCGAACTGCGGGCCATCGCCGCCCGGTTCAACGCACCGCCCGGGCCGGAAGACCTCGCCGAAAGC CTGCGTGGCGGAGCCATTTTCGACCGCTGGGCCAAGATGGGCGGGATGGCCAGCGCGCTCGGCGCCCCCACCTCCCCGGA GGCCGCGGGTGAGGGGACGGCCCGGTACGTGCGGTTCCAGCGCGGCGCGATGTACTGGTCACCGGAAAGCGGCGCGGCAC CGGTGATGGGCGCGATCTACGACGCGTGGGGGTCCCTCGGCTTCGAACGCGGCGCCCTCGGACTGCCCACCAGCGGTGAG ATCCACGAACCGCTGTGGATCAAACAGAACTTCCAGCACGGCACGCTGAACTTCGACCGGGAGAAGGCCACCGTCACCCG CGTGATCGACGGTGTGCCGTTGGAGCTGCCGCCCGCGTCGTCGCACACCCCGCCGGTCCAGCTGGAGCGCTTCACCGCCC CGATCAACCCCTGA
Upstream 100 bases:
>100_bases AGCCAGAGCGGCTCTGCGGTGCCGTTGCGATTTATTTTGGTTGCCGTTTTCGGCCGTGTCGAAACATGAGTAACAACTGA CACATACGTAACATCAGTCC
Downstream 100 bases:
>100_bases CGGGTCGCTACATCCACCAGCGTTCGAGGACGCGGGCGACCCCGTCGTCGGTGTTGCGGGAGGTGACCTCGTCGGCGGCC GACACCGCCTCCGGGTGCGC
Product: LGFP repeat-containing protein
Products: NA
Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; LGFP Repeat-Containing Protein; LGFP Repeat Protein; FG-GAP Repeat-Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; LysM Domain-Containing Protein; Twin-Arginine Translocation Pathway Signal; Esterase; SpoIID/LytB Domain; LOW QUALITY PROTEIN Secreted Protein; Mycolyltransferase; Peptidase S8 And; N-Acetylmuramoyl-L-Alanine Amidase Lytc; N-Acetymuramoyl-L-Alanine Amidase; Mycoloyl Transferase
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MLSRRPAPSLFFTAIAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIREIHQDTPFSMVALTAEDLTGT SARVRAKKDDGSWGPWYEAEPLEGVGEETAARRGTDPVFVGRTTTVQIAVTRPADAPPSAPAPAEHRGPDLGYLPATVEQ PFAQNINAVLISPPQAPGDTLPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAPEDSAG MVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTWGVAMMGNFEVVPPTPIQLRTTGRLL GWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTLPSIFTHRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAES LRGGAIFDRWAKMGGMASALGAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGLPTSGE IHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLELPPASSHTPPVQLERFTAPINP
Sequences:
>Translated_537_residues MLSRRPAPSLFFTAIAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIREIHQDTPFSMVALTAEDLTGT SARVRAKKDDGSWGPWYEAEPLEGVGEETAARRGTDPVFVGRTTTVQIAVTRPADAPPSAPAPAEHRGPDLGYLPATVEQ PFAQNINAVLISPPQAPGDTLPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAPEDSAG MVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTWGVAMMGNFEVVPPTPIQLRTTGRLL GWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTLPSIFTHRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAES LRGGAIFDRWAKMGGMASALGAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGLPTSGE IHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLELPPASSHTPPVQLERFTAPINP >Mature_537_residues MLSRRPAPSLFFTAIAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIREIHQDTPFSMVALTAEDLTGT SARVRAKKDDGSWGPWYEAEPLEGVGEETAARRGTDPVFVGRTTTVQIAVTRPADAPPSAPAPAEHRGPDLGYLPATVEQ PFAQNINAVLISPPQAPGDTLPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAPEDSAG MVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTWGVAMMGNFEVVPPTPIQLRTTGRLL GWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTLPSIFTHRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAES LRGGAIFDRWAKMGGMASALGAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGLPTSGE IHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLELPPASSHTPPVQLERFTAPINP
Specific function: Unknown
COG id: COG5479
COG function: function code M; Uncharacterized protein potentially involved in peptidoglycan biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4827036, Length=187, Percent_Identity=32.0855614973262, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI16418405, Length=134, Percent_Identity=34.3283582089552, Blast_Score=76, Evalue=9e-14, Organism=Homo sapiens, GI56550073, Length=169, Percent_Identity=30.7692307692308, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56713; Mature: 56713
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRRPAPSLFFTAIAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIRE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IHQDTPFSMVALTAEDLTGTSARVRAKKDDGSWGPWYEAEPLEGVGEETAARRGTDPVFV HHCCCCCEEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE GRTTTVQIAVTRPADAPPSAPAPAEHRGPDLGYLPATVEQPFAQNINAVLISPPQAPGDT CCCEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCHHHCHHHCCCCEEEECCCCCCCCC LPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAPEDSAG CCCCCHHCCCCCCHHEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCCCCCCCCCHH MVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTWGVAMM HHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GNFEVVPPTPIQLRTTGRLLGWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTLPSIFT CCEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHH HRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAESLRGGAIFDRWAKMGGMASAL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHH GAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGLPTSGE CCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC IHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLELPPASSHTPPVQLERFTAPINP CCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MLSRRPAPSLFFTAIAATLVLLPWAVNGLPGDDDESAAAGAPTLTEQPLAGLGGGETIRE CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH IHQDTPFSMVALTAEDLTGTSARVRAKKDDGSWGPWYEAEPLEGVGEETAARRGTDPVFV HHCCCCCEEEEEEHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHCCCCCEEE GRTTTVQIAVTRPADAPPSAPAPAEHRGPDLGYLPATVEQPFAQNINAVLISPPQAPGDT CCCEEEEEEEECCCCCCCCCCCCCHHCCCCCCCCCCHHHCHHHCCCCEEEECCCCCCCCC LPLPNAVMAPGVPPRIITRGQWGADESMRCGGPRYDAAVRAGVVHHTAGSNDYAPEDSAG CCCCCHHCCCCCCHHEEECCCCCCCCCCCCCCCCHHHHHHHCEEEECCCCCCCCCCCCHH MVRSIYEYHTRTLGWCDLGYNALVDKFGQVFEGRAGGMDRPVEASHTGGFNTDTWGVAMM HHHHHHHHHHCEEEEHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GNFEVVPPTPIQLRTTGRLLGWRLGLDRVNPMGTTVLTSAGGSFTHFPAGATPTLPSIFT CCEEECCCCCEEEEECCCEEEEEECCCCCCCCCCEEEECCCCCEEECCCCCCCCCCHHHH HRDVGNTECPGNAAYAAMGELRAIAARFNAPPGPEDLAESLRGGAIFDRWAKMGGMASAL CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHH GAPTSPEAAGEGTARYVRFQRGAMYWSPESGAAPVMGAIYDAWGSLGFERGALGLPTSGE CCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC IHEPLWIKQNFQHGTLNFDREKATVTRVIDGVPLELPPASSHTPPVQLERFTAPINP CCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA