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The map label for this gene is ydeP [H]

Identifier: 119871090

GI number: 119871090

Start: 5302373

End: 5302711

Strand: Direct

Name: ydeP [H]

Synonym: Mkms_5063

Alternate gene names: 119871090

Gene position: 5302373-5302711 (Clockwise)

Preceding gene: 119871086

Following gene: 119871095

Centisome position: 92.42

GC content: 66.08

Gene sequence:

>339_bases
TTGAGTCAACTCGGTGAGTACACCTGCGGTCTCGACGCCGCGATGGCGGTGGTCGACGGGAAGTGGAAACCCTTGATCCT
CTGGGAGCTGCAGGACGGCCCCAAGCGGTTCAACGCGCTGCACCGCAGCCTGGCCGGCGTCTCGCAGAAGATGCTCACCC
AGCACCTCAAAGAACTGCAGCGCCACGGCGTGGTGCACCGCGAGAGCTACCACGAGGTGCCGCCGCGGGTGGAGTACTCG
ATGACGCCGGTGGGCCGGGAACTGTTGGACGCGCTTGCACCGCTGGGCGATTGGGCCACCAGGCACATCGATCTGATCTG
CGCGGCGAAGACCGGCTGA

Upstream 100 bases:

>100_bases
ATGTCCTCATCGTCGGGTCGACGCGGAGATCTCGACAAGTACCCACTTCAAAGTGCCATACTCACCAAGCGGTAAGTAAT
GGCGCTGAACAGGAGCTCTG

Downstream 100 bases:

>100_bases
GCTACTCCGGCGTCTTCTCGCGCCACTCCCGTTCGAACGGCAGCCGCCATGCATTCGGGGCGATCAGCTGGTGGATGGCG
TTGGGCCCCCAGGTCCCGGG

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 111

Protein sequence:

>112_residues
MSQLGEYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLAGVSQKMLTQHLKELQRHGVVHRESYHEVPPRVEYS
MTPVGRELLDALAPLGDWATRHIDLICAAKTG

Sequences:

>Translated_112_residues
MSQLGEYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLAGVSQKMLTQHLKELQRHGVVHRESYHEVPPRVEYS
MTPVGRELLDALAPLGDWATRHIDLICAAKTG
>Mature_111_residues
SQLGEYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLAGVSQKMLTQHLKELQRHGVVHRESYHEVPPRVEYSM
TPVGRELLDALAPLGDWATRHIDLICAAKTG

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=93, Percent_Identity=40.8602150537634, Blast_Score=80, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12557; Mature: 12425

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLGEYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLAGVSQKMLTQHLKELQ
CCCCCCHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGVVHRESYHEVPPRVEYSMTPVGRELLDALAPLGDWATRHIDLICAAKTG
HCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHEEEEEECCCC
>Mature Secondary Structure 
SQLGEYTCGLDAAMAVVDGKWKPLILWELQDGPKRFNALHRSLAGVSQKMLTQHLKELQ
CCCCCHHCCHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHGVVHRESYHEVPPRVEYSMTPVGRELLDALAPLGDWATRHIDLICAAKTG
HCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]