| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870914
Identifier: 119870914
GI number: 119870914
Start: 5123025
End: 5124107
Strand: Direct
Name: 119870914
Synonym: Mkms_4886
Alternate gene names: NA
Gene position: 5123025-5124107 (Clockwise)
Preceding gene: 119870913
Following gene: 119870921
Centisome position: 89.29
GC content: 69.53
Gene sequence:
>1083_bases ATGCGCGACGGATCCGGTGGCGGGGGCGCGCCACGTAAAATCGCGGACATGAGCCACGACTGGCTGCTGGTGGAGACACT GGGGAGTGAGCCCGTCGTCGTCGCACAGGGCCGGCGAGCCGAGAAGATGGTTCCGATCAGCGCCTTCCTGCGGCGCAATC CCCATCTGATGGCCGTGCAGACCGCCATCGCCGAGACCGTCCGGGCCGGTCAGGGGCTGTCGAGCATCACGCCGAAGAAC GACCGCGTGATCCGCACCGAGGTGGTGCAGATGTCCGACGGACGCATCCACGGGGTGCACGTCTGGATCGGCCCACCGAA TCTGGAACCACCCGAACGTCCGCTTCCCGGTCCGCTGAAGTGGGATCTGACGACCGGTATCGCGACGGCCACCACGCAGT CGCTGGCCAACAGCGGTCGCGACCCGGACGCCGAGGACACCCACGGCCGGGCGTTGGCCGAGGATCTGCCGACGCGCGAC CTCAATCCGAGCGAGACCAAGGTGCTGTCGATGGCGGTCCGGCCCGAACCCGGCCAGACCTTCTGCAGCACCTGGGACGT CACCGACCATCAGGGCGCGCCGATCGCGGTCGGCTTCAGCGCGCGCGCCCTGCTCGAGGCGCAGGACAACGGTGCGGAGA GGCTGGTCTGCCGGGCGATGAACTGGCGCGCGGAGCGCGAGGGCCCCGAGCATCCGCCACCCGACCACCTGGCCCAGCGG ATACTCGACGGGTTGTCCCAGACGGGTCTGCACCGGGCGTTGGTGGATCTGGACAACTGGAAGCTGCTCAAGTGGCTCGA CCCGCCGGCACCGTTCTACGACTGGCGCGCCAACGAGGTGCACCCGGACGACGATGCGCACCTGGCGCGGATGATCACCG AACTCGCCGACCAGGCCACCACCGCGGTGATGCGGTTGCGGACCGCCGACGGCGACTGGGCGCCGGTGCACGTGACGATC AATCGCATCGAACTCGAACCGGAGACGTTCGCCGGCCTGGCCACGGTGCGGCTGCCCACGGACGAGGAGTTGCGCGAGGC GCGGTTGTCGCCGACCACCGCACCGCCTGGGTCACCGGAGTAG
Upstream 100 bases:
>100_bases GCCACCCGGAACCGGGCGTGGAAGCAAAATACCTTGTTATGGCAGAGACCGCCACGAAATGCGAACGGTCCTCCGGGCCG TCGCACGCTGATCGCAGCGG
Downstream 100 bases:
>100_bases CACCGGTCCCCCACGCGCGGCCGCGTGCGCGGGCCCGAGTCTCCAGGCACCCGACCCCACCCCGGCTTCGACGTGGACCA CCACCTCCAGACCGTCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 360; Mature: 360
Protein sequence:
>360_residues MRDGSGGGGAPRKIADMSHDWLLVETLGSEPVVVAQGRRAEKMVPISAFLRRNPHLMAVQTAIAETVRAGQGLSSITPKN DRVIRTEVVQMSDGRIHGVHVWIGPPNLEPPERPLPGPLKWDLTTGIATATTQSLANSGRDPDAEDTHGRALAEDLPTRD LNPSETKVLSMAVRPEPGQTFCSTWDVTDHQGAPIAVGFSARALLEAQDNGAERLVCRAMNWRAEREGPEHPPPDHLAQR ILDGLSQTGLHRALVDLDNWKLLKWLDPPAPFYDWRANEVHPDDDAHLARMITELADQATTAVMRLRTADGDWAPVHVTI NRIELEPETFAGLATVRLPTDEELREARLSPTTAPPGSPE
Sequences:
>Translated_360_residues MRDGSGGGGAPRKIADMSHDWLLVETLGSEPVVVAQGRRAEKMVPISAFLRRNPHLMAVQTAIAETVRAGQGLSSITPKN DRVIRTEVVQMSDGRIHGVHVWIGPPNLEPPERPLPGPLKWDLTTGIATATTQSLANSGRDPDAEDTHGRALAEDLPTRD LNPSETKVLSMAVRPEPGQTFCSTWDVTDHQGAPIAVGFSARALLEAQDNGAERLVCRAMNWRAEREGPEHPPPDHLAQR ILDGLSQTGLHRALVDLDNWKLLKWLDPPAPFYDWRANEVHPDDDAHLARMITELADQATTAVMRLRTADGDWAPVHVTI NRIELEPETFAGLATVRLPTDEELREARLSPTTAPPGSPE >Mature_360_residues MRDGSGGGGAPRKIADMSHDWLLVETLGSEPVVVAQGRRAEKMVPISAFLRRNPHLMAVQTAIAETVRAGQGLSSITPKN DRVIRTEVVQMSDGRIHGVHVWIGPPNLEPPERPLPGPLKWDLTTGIATATTQSLANSGRDPDAEDTHGRALAEDLPTRD LNPSETKVLSMAVRPEPGQTFCSTWDVTDHQGAPIAVGFSARALLEAQDNGAERLVCRAMNWRAEREGPEHPPPDHLAQR ILDGLSQTGLHRALVDLDNWKLLKWLDPPAPFYDWRANEVHPDDDAHLARMITELADQATTAVMRLRTADGDWAPVHVTI NRIELEPETFAGLATVRLPTDEELREARLSPTTAPPGSPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39390; Mature: 39390
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDGSGGGGAPRKIADMSHDWLLVETLGSEPVVVAQGRRAEKMVPISAFLRRNPHLMAVQ CCCCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCEEEHH TAIAETVRAGQGLSSITPKNDRVIRTEVVQMSDGRIHGVHVWIGPPNLEPPERPLPGPLK HHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCE WDLTTGIATATTQSLANSGRDPDAEDTHGRALAEDLPTRDLNPSETKVLSMAVRPEPGQT EEHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCC FCSTWDVTDHQGAPIAVGFSARALLEAQDNGAERLVCRAMNWRAEREGPEHPPPDHLAQR CEEECCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHH ILDGLSQTGLHRALVDLDNWKLLKWLDPPAPFYDWRANEVHPDDDAHLARMITELADQAT HHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TAVMRLRTADGDWAPVHVTINRIELEPETFAGLATVRLPTDEELREARLSPTTAPPGSPE HHHHEEECCCCCEEEEEEEEEEEEECCHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRDGSGGGGAPRKIADMSHDWLLVETLGSEPVVVAQGRRAEKMVPISAFLRRNPHLMAVQ CCCCCCCCCCCCHHHCCCCCEEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCEEEHH TAIAETVRAGQGLSSITPKNDRVIRTEVVQMSDGRIHGVHVWIGPPNLEPPERPLPGPLK HHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCE WDLTTGIATATTQSLANSGRDPDAEDTHGRALAEDLPTRDLNPSETKVLSMAVRPEPGQT EEHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEEEECCCCCCC FCSTWDVTDHQGAPIAVGFSARALLEAQDNGAERLVCRAMNWRAEREGPEHPPPDHLAQR CEEECCCCCCCCCCEEECCCCEEEEEECCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHH ILDGLSQTGLHRALVDLDNWKLLKWLDPPAPFYDWRANEVHPDDDAHLARMITELADQAT HHHHHHHHCHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH TAVMRLRTADGDWAPVHVTINRIELEPETFAGLATVRLPTDEELREARLSPTTAPPGSPE HHHHEEECCCCCEEEEEEEEEEEEECCHHHCCEEEEECCCHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA