| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870921
Identifier: 119870921
GI number: 119870921
Start: 5129032
End: 5129889
Strand: Direct
Name: 119870921
Synonym: Mkms_4893
Alternate gene names: NA
Gene position: 5129032-5129889 (Clockwise)
Preceding gene: 119870914
Following gene: 119870923
Centisome position: 89.4
GC content: 66.78
Gene sequence:
>858_bases GTGAGCGCATCTGAGCAGGACGCCGCGTCGCCCAGCGAGCAGTCTGCGGCATCGCCGGCCGATCACCCCGTGCGCACGGC TGCGTTTTTCGATCTTGACAAGACGGTCATTGCGAAGTCGAGCACGTTGGCTTTCAGCAAACCTTTCTTCGATCAGGGCC TCCTGAATCGGCGAGCCGTGCTCAAGTCCACCTACGCACAGTTCTTCTTCCTGATGTCGGGCGCCGACCACGACCAGATG GACCGCATGCGGTCCTACGTGACCAACATGTGCACCGGGTGGGATGTCGAGCAGATCAAGTCCATCGTCAACGAGACGCT GCACGACATCGTCGACCCCTTGGTCTTCGCCGAGGCGGCCGACCTGATCGCCGACCACAAACTCTGCGGTCGCGACGTGG TGGTCGTATCCGCATCCGGTGAGGAGATCGTCGCGCCGATCGCCCGCGGACTGGGCGCCACCCACGCGATGGCGACCCGG ATGGTCGTCGAGGACGGGCGCTACACCGGGGAGATCGCCTTCTACTGCTACGGCGAGGGCAAGGTCGAAGCCATCCGCGC GCTCGCCGCGCGGGAGGGATACGCACTCGAGCACTGTTACGCGTACTCCGATTCGATCACCGATCTGCCGATGCTCGAGG CGGTGGGCCATCCGACCGTGGTCAACCCCGACCGCGCGCTGCGCAAGGAAGCCACCGCCCGCGGCTGGCCGGTGTTGACC TTCACCAGGCCGGTGTCGCTGCGCGACCGCATTCCCGCCCCGTCGGGCGCCGCCGTCGCCACCACCGCGGCGGTCGGGAT GAGCGCGCTCGCCGCCGGCGCGCTGACGTATTCACTGCTCCGCCGCTTCGCACTCTGA
Upstream 100 bases:
>100_bases TGATTCGTTCGAATATTGCGCATTCGGACACGTGTCTTGATCTGCCAATTTGTACACCCGGCACCCCGGATGTCACGGCG TTCGTGTTTATGCTGGCCAG
Downstream 100 bases:
>100_bases CGGGTTGCTGAGCGGTGCGCCGTAACGATCGGGATTCGGGCCCGCGTTGGCCTTGATGTGACGGTCATCACGGAGTACAA AGGAAGCACGGAAGCCTGGT
Product: HAD family hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSASEQDAASPSEQSAASPADHPVRTAAFFDLDKTVIAKSSTLAFSKPFFDQGLLNRRAVLKSTYAQFFFLMSGADHDQM DRMRSYVTNMCTGWDVEQIKSIVNETLHDIVDPLVFAEAADLIADHKLCGRDVVVVSASGEEIVAPIARGLGATHAMATR MVVEDGRYTGEIAFYCYGEGKVEAIRALAAREGYALEHCYAYSDSITDLPMLEAVGHPTVVNPDRALRKEATARGWPVLT FTRPVSLRDRIPAPSGAAVATTAAVGMSALAAGALTYSLLRRFAL
Sequences:
>Translated_285_residues MSASEQDAASPSEQSAASPADHPVRTAAFFDLDKTVIAKSSTLAFSKPFFDQGLLNRRAVLKSTYAQFFFLMSGADHDQM DRMRSYVTNMCTGWDVEQIKSIVNETLHDIVDPLVFAEAADLIADHKLCGRDVVVVSASGEEIVAPIARGLGATHAMATR MVVEDGRYTGEIAFYCYGEGKVEAIRALAAREGYALEHCYAYSDSITDLPMLEAVGHPTVVNPDRALRKEATARGWPVLT FTRPVSLRDRIPAPSGAAVATTAAVGMSALAAGALTYSLLRRFAL >Mature_284_residues SASEQDAASPSEQSAASPADHPVRTAAFFDLDKTVIAKSSTLAFSKPFFDQGLLNRRAVLKSTYAQFFFLMSGADHDQMD RMRSYVTNMCTGWDVEQIKSIVNETLHDIVDPLVFAEAADLIADHKLCGRDVVVVSASGEEIVAPIARGLGATHAMATRM VVEDGRYTGEIAFYCYGEGKVEAIRALAAREGYALEHCYAYSDSITDLPMLEAVGHPTVVNPDRALRKEATARGWPVLTF TRPVSLRDRIPAPSGAAVATTAAVGMSALAAGALTYSLLRRFAL
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR006385 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30727; Mature: 30596
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASEQDAASPSEQSAASPADHPVRTAAFFDLDKTVIAKSSTLAFSKPFFDQGLLNRRAV CCCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCHHHHHCCCCCEECCCCHHHHHHHHHHH LKSTYAQFFFLMSGADHDQMDRMRSYVTNMCTGWDVEQIKSIVNETLHDIVDPLVFAEAA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLIADHKLCGRDVVVVSASGEEIVAPIARGLGATHAMATRMVVEDGRYTGEIAFYCYGEG HHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCC KVEAIRALAAREGYALEHCYAYSDSITDLPMLEAVGHPTVVNPDRALRKEATARGWPVLT HHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCEECCHHHHHHHHHCCCCEEEE FTRPVSLRDRIPAPSGAAVATTAAVGMSALAAGALTYSLLRRFAL EECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SASEQDAASPSEQSAASPADHPVRTAAFFDLDKTVIAKSSTLAFSKPFFDQGLLNRRAV CCCCCCCCCCCHHCCCCCCCCCCHHHHHHCCCHHHHHCCCCCEECCCCHHHHHHHHHHH LKSTYAQFFFLMSGADHDQMDRMRSYVTNMCTGWDVEQIKSIVNETLHDIVDPLVFAEAA HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH DLIADHKLCGRDVVVVSASGEEIVAPIARGLGATHAMATRMVVEDGRYTGEIAFYCYGEG HHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEEEEEECCC KVEAIRALAAREGYALEHCYAYSDSITDLPMLEAVGHPTVVNPDRALRKEATARGWPVLT HHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHCCCCCEECCHHHHHHHHHCCCCEEEE FTRPVSLRDRIPAPSGAAVATTAAVGMSALAAGALTYSLLRRFAL EECCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]