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The map label for this gene is yngJ [H]

Identifier: 119870739

GI number: 119870739

Start: 4933815

End: 4935002

Strand: Direct

Name: yngJ [H]

Synonym: Mkms_4710

Alternate gene names: 119870739

Gene position: 4933815-4935002 (Clockwise)

Preceding gene: 119870726

Following gene: 119870740

Centisome position: 86.0

GC content: 66.58

Gene sequence:

>1188_bases
ATGCGGATCGGCTACACCCCCGAGCAGGAGGAGTTGCGCCGCGAACTGCGGTCGTACTTCACCAAACTCATGACGCCCGA
GCGCGCCGAGGCGCTCGCGAGCAACGACGGTGAGATGGGACGCGGCAACGTCTACCGCGAGACCGTCGCACAGATGGGCA
AGGACGGGTGGTTGACGCTGTCGTGGCCCAAGGAGTTCGGCGGTCAGGCCCGCCCGCCGATGGACGGCCTGATCTTCAAC
GACGAGGCCGCGATCGCAAACGTCCCGGTGCCGTTCCTGACGATCAACAGCGTCGCGCCGACGATTATGGCGTTCGGCAC
CGAAGAGCAGAAGAAGTTCTTCCTGCCCAAGATCGCCTCGGGCGATCTGCACTTCTCCATCGGCTACTCCGAACCCGGTG
CGGGCACCGACCTGGCGTCGTTGCGCACCACCGCGGTACGCGACGGCGACGAGTACGTCATCAACGGCCAGAAGATGTGG
ACGTCGCTGATCGCCTACGCCGACTACGTCTGGCTTGCTGTGCGGACCAACCCCGAGGCCAAGAAGCACCGCGGCATCTC
GATGCTCATCGTGCCCACCACGGCCGAGGGCTTCTCCTGGACGCCGGTGCACACGATGTCCGGTGTGGACACCAGCGCCA
CCTACTACCAGGACGTGCGGGTACCCGTCTCGAATCTGGTTGGCGAGGAGAACGCGGGCTGGAAGCTGGTCACCAACCAG
CTGAACCATGAGCGCGTCGCGTTGGTGTCGGCGCAGCCGATCTTCGTCGCGCTCGACGGCGTCCGGGAATGGGCGCAGAA
CACTCACATTTCGCCGGACGGGCGCGGCAGGCGGTTGATCGACTCCGAGTGGGTGCAGCTGAACCTGGCCCGGGTACATG
CCAAGGCCGAAGTCCTCAAGCTGATCAACTGGGAGTTGGCGTCCACCGAGGCGGCGCCGTCCCCGGCCGACGCATCGGCG
GCCAAGGTGTTCGGCACCGAATTGGCGACCGAGGCCTACCGCCTGCTGATGGAGGTGCTGGGCACCGCGGCCACGCTGCG
TACCAACTCCCCCGGCGCGCTGCTGCGCGGACGCGTCGAGCGCATGCACCGGTCCTGCCTGATCCTGACGTTCGGCGGCG
GCACCAACGAGATCCAGCGCGACATCATCGGCATGGTCGCGCTCGGCCTGCCCCGGGTCAACCGGTAA

Upstream 100 bases:

>100_bases
ACAACACCGGTCTGGACCCCAAGACTAGAACGTGTTACAACCTGGTGGAGTGGGCGGCCCGGCGGGTCGTCCGAGACGCG
GCACAGTGAGGACGGCGCGA

Downstream 100 bases:

>100_bases
GGAGCATCATGGATTTTTCATCGACAGAGGCCGCGAACGACCTCGGCGGCCTGGTCCGCACCATCACCGAGTCGGTGTGC
ACACCCGAACACCAGCGCGA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRIGYTPEQEELRRELRSYFTKLMTPERAEALASNDGEMGRGNVYRETVAQMGKDGWLTLSWPKEFGGQARPPMDGLIFN
DEAAIANVPVPFLTINSVAPTIMAFGTEEQKKFFLPKIASGDLHFSIGYSEPGAGTDLASLRTTAVRDGDEYVINGQKMW
TSLIAYADYVWLAVRTNPEAKKHRGISMLIVPTTAEGFSWTPVHTMSGVDTSATYYQDVRVPVSNLVGEENAGWKLVTNQ
LNHERVALVSAQPIFVALDGVREWAQNTHISPDGRGRRLIDSEWVQLNLARVHAKAEVLKLINWELASTEAAPSPADASA
AKVFGTELATEAYRLLMEVLGTAATLRTNSPGALLRGRVERMHRSCLILTFGGGTNEIQRDIIGMVALGLPRVNR

Sequences:

>Translated_395_residues
MRIGYTPEQEELRRELRSYFTKLMTPERAEALASNDGEMGRGNVYRETVAQMGKDGWLTLSWPKEFGGQARPPMDGLIFN
DEAAIANVPVPFLTINSVAPTIMAFGTEEQKKFFLPKIASGDLHFSIGYSEPGAGTDLASLRTTAVRDGDEYVINGQKMW
TSLIAYADYVWLAVRTNPEAKKHRGISMLIVPTTAEGFSWTPVHTMSGVDTSATYYQDVRVPVSNLVGEENAGWKLVTNQ
LNHERVALVSAQPIFVALDGVREWAQNTHISPDGRGRRLIDSEWVQLNLARVHAKAEVLKLINWELASTEAAPSPADASA
AKVFGTELATEAYRLLMEVLGTAATLRTNSPGALLRGRVERMHRSCLILTFGGGTNEIQRDIIGMVALGLPRVNR
>Mature_395_residues
MRIGYTPEQEELRRELRSYFTKLMTPERAEALASNDGEMGRGNVYRETVAQMGKDGWLTLSWPKEFGGQARPPMDGLIFN
DEAAIANVPVPFLTINSVAPTIMAFGTEEQKKFFLPKIASGDLHFSIGYSEPGAGTDLASLRTTAVRDGDEYVINGQKMW
TSLIAYADYVWLAVRTNPEAKKHRGISMLIVPTTAEGFSWTPVHTMSGVDTSATYYQDVRVPVSNLVGEENAGWKLVTNQ
LNHERVALVSAQPIFVALDGVREWAQNTHISPDGRGRRLIDSEWVQLNLARVHAKAEVLKLINWELASTEAAPSPADASA
AKVFGTELATEAYRLLMEVLGTAATLRTNSPGALLRGRVERMHRSCLILTFGGGTNEIQRDIIGMVALGLPRVNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=388, Percent_Identity=28.8659793814433, Blast_Score=136, Evalue=3e-32,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=24.3654822335025, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI4557233, Length=347, Percent_Identity=28.5302593659942, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557231, Length=340, Percent_Identity=27.3529411764706, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI187960098, Length=340, Percent_Identity=27.3529411764706, Blast_Score=109, Evalue=5e-24,
Organism=Homo sapiens, GI226958414, Length=347, Percent_Identity=24.4956772334294, Blast_Score=108, Evalue=8e-24,
Organism=Homo sapiens, GI4501859, Length=393, Percent_Identity=24.9363867684478, Blast_Score=105, Evalue=6e-23,
Organism=Homo sapiens, GI7656849, Length=395, Percent_Identity=26.3291139240506, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI76496475, Length=297, Percent_Identity=27.9461279461279, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI4557235, Length=297, Percent_Identity=27.9461279461279, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI21361497, Length=370, Percent_Identity=26.4864864864865, Blast_Score=99, Evalue=7e-21,
Organism=Escherichia coli, GI87081958, Length=394, Percent_Identity=24.3654822335025, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1786223, Length=411, Percent_Identity=23.6009732360097, Blast_Score=74, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17508101, Length=354, Percent_Identity=28.5310734463277, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI17506239, Length=341, Percent_Identity=29.0322580645161, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17551932, Length=343, Percent_Identity=27.4052478134111, Blast_Score=121, Evalue=7e-28,
Organism=Caenorhabditis elegans, GI17505929, Length=343, Percent_Identity=27.9883381924198, Blast_Score=117, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI17570075, Length=395, Percent_Identity=24.5569620253165, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI17534899, Length=389, Percent_Identity=26.2210796915167, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71990804, Length=284, Percent_Identity=28.8732394366197, Blast_Score=114, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI17538396, Length=398, Percent_Identity=25.6281407035176, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17569725, Length=353, Percent_Identity=25.7790368271955, Blast_Score=105, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=32.3275862068966, Blast_Score=104, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17533517, Length=357, Percent_Identity=24.3697478991597, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71985184, Length=298, Percent_Identity=25.8389261744966, Blast_Score=84, Evalue=9e-17,
Organism=Caenorhabditis elegans, GI71985192, Length=218, Percent_Identity=27.9816513761468, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71982178, Length=163, Percent_Identity=31.2883435582822, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI21355753, Length=400, Percent_Identity=28, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI21356377, Length=365, Percent_Identity=27.6712328767123, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI24646207, Length=349, Percent_Identity=26.9340974212034, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281363737, Length=403, Percent_Identity=25.0620347394541, Blast_Score=102, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24666513, Length=287, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=294, Percent_Identity=28.9115646258503, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43503; Mature: 43503

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIGYTPEQEELRRELRSYFTKLMTPERAEALASNDGEMGRGNVYRETVAQMGKDGWLTL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEE
SWPKEFGGQARPPMDGLIFNDEAAIANVPVPFLTINSVAPTIMAFGTEEQKKFFLPKIAS
ECCHHHCCCCCCCCCCEEECCCCCEEECCCCEEEECCCCCCCEECCCCHHHHEECCEECC
GDLHFSIGYSEPGAGTDLASLRTTAVRDGDEYVINGQKMWTSLIAYADYVWLAVRTNPEA
CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCEEEEEEECCCCH
KKHRGISMLIVPTTAEGFSWTPVHTMSGVDTSATYYQDVRVPVSNLVGEENAGWKLVTNQ
HHHCCEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHCCCCCHHHHCCCCCCCEEEEECC
LNHERVALVSAQPIFVALDGVREWAQNTHISPDGRGRRLIDSEWVQLNLARVHAKAEVLK
CCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHH
LINWELASTEAAPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRTNSPGALLRGRVE
HHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHH
RMHRSCLILTFGGGTNEIQRDIIGMVALGLPRVNR
HHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRIGYTPEQEELRRELRSYFTKLMTPERAEALASNDGEMGRGNVYRETVAQMGKDGWLTL
CCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCEEE
SWPKEFGGQARPPMDGLIFNDEAAIANVPVPFLTINSVAPTIMAFGTEEQKKFFLPKIAS
ECCHHHCCCCCCCCCCEEECCCCCEEECCCCEEEECCCCCCCEECCCCHHHHEECCEECC
GDLHFSIGYSEPGAGTDLASLRTTAVRDGDEYVINGQKMWTSLIAYADYVWLAVRTNPEA
CCEEEEECCCCCCCCCCHHHHHHHHCCCCCCEEECHHHHHHHHHHHHCEEEEEEECCCCH
KKHRGISMLIVPTTAEGFSWTPVHTMSGVDTSATYYQDVRVPVSNLVGEENAGWKLVTNQ
HHHCCEEEEEEEECCCCCCCCCCHHCCCCCCCCHHHHCCCCCHHHHCCCCCCCEEEEECC
LNHERVALVSAQPIFVALDGVREWAQNTHISPDGRGRRLIDSEWVQLNLARVHAKAEVLK
CCCCEEEEEECCCEEEEEHHHHHHHHCCCCCCCCCCCCCCCCHHHEEEHHHHHHHHHHHH
LINWELASTEAAPSPADASAAKVFGTELATEAYRLLMEVLGTAATLRTNSPGALLRGRVE
HHCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHEEECCCCCHHHHHHHH
RMHRSCLILTFGGGTNEIQRDIIGMVALGLPRVNR
HHCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]