| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is treS [H]
Identifier: 119870715
GI number: 119870715
Start: 4910184
End: 4911863
Strand: Direct
Name: treS [H]
Synonym: Mkms_4686
Alternate gene names: 119870715
Gene position: 4910184-4911863 (Clockwise)
Preceding gene: 119870714
Following gene: 119870716
Centisome position: 85.58
GC content: 65.89
Gene sequence:
>1680_bases ATGAGGAAGATCGAGACCGGCGACCTGTGGTGGAAGAACGCCGTCTTCTACTGCGCCGACATCGAGACGTTCTACGACTG GAACGGCGACGGCACCGTCGACATCCGGGGCATGACCGAGCGCATCGAGTACCTCTTCGACCTCGGGGTCACCTGCCTGT GGCTGATGCCGTTCTATCCGACCGCCCGCAAGGACGACGGCTACGACATCATCGACTTCTTCGGGGTCGATCAGCGCCTG GGCAACCTCGGTGACTTCGTCGAGCTGGTGCGAACCGCACGATCCAAGGGCATCCGGGTGATCGTCGACTTCGTCATGAA CCACACCTCCGATGCCCACCCCTGGTTCAAATCCGCCCGGCGCAGCAAGGACGACCCGTACCGCGATTACTACGTGTGGA GTGAGACCGAGCCCAAGTCGAGTCCGGCCGACGTCGTCTTCCCCGACCAGGAGGACAGCATCTGGGAGCAGGAACCCAAA ACCGGCGAGTGGTACCTGCATCACTTCTACAAGCACCAGCCCGACCTGAACATCGCCAATCCCAAAGTGCAGGAGGAGAT TTCGCGCACACTCGGCTTCTGGTTGCAACTCGGCGTCTCGGGTTTCCGGGTCGACGCCGTCCCCTTCCTGTTCGCCCGCG ACGGAGTGCCCGGCGACCCCGGCGTCTTCGATCCCTACGAATACCTCGGGGACGTCCGCAACTTCGTCAACCGGCGGGTT GGTGACGCGGTGCTGCTCGGCGAGGTGAACGTGCCCTACGACGATCAGAAGTCGTTCTTCGGGGGCCCCGACGGCGACGG ACTCAACATGCAGTTCGACTTCATCGGCATGCAGAACATGTACCTCTCGCTGGCCCGGGGCGACGCCGGCCCGATCGCCG CGGCGCTGCGCGAACGCCCACCGCTCGACGAGACGAGCCAGTGGGCGAACTTCGTGCGCAACCACGACGAGCTCACGCTC GACAAACTGGGCGACGCGGAACGGCAGGAGATCTTCGACGCCTTCGGACCCGAGCGCGACATGCAGCTCTACGGCCGCGG GCTGCGCCGACGCCTGCCGGCGATGCTCGGCGGGGACGAACGGCGGATGCGCATGGTCTACTCGCTGGCGTTCTCGCTGC CCGGCACTCCGGTCCTCTACTACGGCGAGGAGATCGGGATGGCCGAGAACCTCGACATCCCAGGGCGGTTCGCCGTGCGG GTTCCGATGCAGTGGACCAGCGACGACAACGGCGGTTTCTCCAGGGCCGCCGCGCGCCGACTCCCCCGCCCGATCACCGA CGGCCTGTACGGCCCCGACCGGGTGAACGTCGCCGACCAGCGCCACGACCACCAGTCGTTCTGGTGGTTCATCCGCGATC TCATCTACACCTATCGCCAGCAGCCGGAGATCGGCTGGTCGACGGCCGAGGTGCTCGACCAGCCCAACCCTGCGGTGCTC GCGCACTGCTGCCGGGAGAAGAGTGGGTGGACGATGGTGGGGCTGCACAATTTCGGCGCCGACCGGTGCATGGTGCCGAT CCAGATCGAGGACGCCCCGGAGGGGTCGACGCTCGTCGACCTGCTGGACGGGCTGTCGGTGCACGAACTGGACGCGAAGG GACGGCTCGAGATCGGCCTGGACGGTTACGGTTACCGTTGGCTACGCCTGGTCCGGCCGGGCGACGACCCGATCATCTGA
Upstream 100 bases:
>100_bases ACTTCGTCGGCCAGCAGCAGGCCGGCTTCATCGACGCCTTCGGTGAGCACGTCCTTCCACAGCTGTCACCGACCGCTCCC ACGTCGAGCGCGGCGATCGC
Downstream 100 bases:
>100_bases CAGACCGAAGTGACCGTGTGGGAGTTCGTACTCGGCGTTGCCGTCGGCCTCGCGCTGACCTGGCTCGCGCTCGTCGTCGT GCTGCTCATCGCGCGGCCAC
Product: alpha amylase catalytic subunit
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 559; Mature: 559
Protein sequence:
>559_residues MRKIETGDLWWKNAVFYCADIETFYDWNGDGTVDIRGMTERIEYLFDLGVTCLWLMPFYPTARKDDGYDIIDFFGVDQRL GNLGDFVELVRTARSKGIRVIVDFVMNHTSDAHPWFKSARRSKDDPYRDYYVWSETEPKSSPADVVFPDQEDSIWEQEPK TGEWYLHHFYKHQPDLNIANPKVQEEISRTLGFWLQLGVSGFRVDAVPFLFARDGVPGDPGVFDPYEYLGDVRNFVNRRV GDAVLLGEVNVPYDDQKSFFGGPDGDGLNMQFDFIGMQNMYLSLARGDAGPIAAALRERPPLDETSQWANFVRNHDELTL DKLGDAERQEIFDAFGPERDMQLYGRGLRRRLPAMLGGDERRMRMVYSLAFSLPGTPVLYYGEEIGMAENLDIPGRFAVR VPMQWTSDDNGGFSRAAARRLPRPITDGLYGPDRVNVADQRHDHQSFWWFIRDLIYTYRQQPEIGWSTAEVLDQPNPAVL AHCCREKSGWTMVGLHNFGADRCMVPIQIEDAPEGSTLVDLLDGLSVHELDAKGRLEIGLDGYGYRWLRLVRPGDDPII
Sequences:
>Translated_559_residues MRKIETGDLWWKNAVFYCADIETFYDWNGDGTVDIRGMTERIEYLFDLGVTCLWLMPFYPTARKDDGYDIIDFFGVDQRL GNLGDFVELVRTARSKGIRVIVDFVMNHTSDAHPWFKSARRSKDDPYRDYYVWSETEPKSSPADVVFPDQEDSIWEQEPK TGEWYLHHFYKHQPDLNIANPKVQEEISRTLGFWLQLGVSGFRVDAVPFLFARDGVPGDPGVFDPYEYLGDVRNFVNRRV GDAVLLGEVNVPYDDQKSFFGGPDGDGLNMQFDFIGMQNMYLSLARGDAGPIAAALRERPPLDETSQWANFVRNHDELTL DKLGDAERQEIFDAFGPERDMQLYGRGLRRRLPAMLGGDERRMRMVYSLAFSLPGTPVLYYGEEIGMAENLDIPGRFAVR VPMQWTSDDNGGFSRAAARRLPRPITDGLYGPDRVNVADQRHDHQSFWWFIRDLIYTYRQQPEIGWSTAEVLDQPNPAVL AHCCREKSGWTMVGLHNFGADRCMVPIQIEDAPEGSTLVDLLDGLSVHELDAKGRLEIGLDGYGYRWLRLVRPGDDPII >Mature_559_residues MRKIETGDLWWKNAVFYCADIETFYDWNGDGTVDIRGMTERIEYLFDLGVTCLWLMPFYPTARKDDGYDIIDFFGVDQRL GNLGDFVELVRTARSKGIRVIVDFVMNHTSDAHPWFKSARRSKDDPYRDYYVWSETEPKSSPADVVFPDQEDSIWEQEPK TGEWYLHHFYKHQPDLNIANPKVQEEISRTLGFWLQLGVSGFRVDAVPFLFARDGVPGDPGVFDPYEYLGDVRNFVNRRV GDAVLLGEVNVPYDDQKSFFGGPDGDGLNMQFDFIGMQNMYLSLARGDAGPIAAALRERPPLDETSQWANFVRNHDELTL DKLGDAERQEIFDAFGPERDMQLYGRGLRRRLPAMLGGDERRMRMVYSLAFSLPGTPVLYYGEEIGMAENLDIPGRFAVR VPMQWTSDDNGGFSRAAARRLPRPITDGLYGPDRVNVADQRHDHQSFWWFIRDLIYTYRQQPEIGWSTAEVLDQPNPAVL AHCCREKSGWTMVGLHNFGADRCMVPIQIEDAPEGSTLVDLLDGLSVHELDAKGRLEIGLDGYGYRWLRLVRPGDDPII
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=437, Percent_Identity=31.350114416476, Blast_Score=184, Evalue=1e-46, Organism=Escherichia coli, GI1790687, Length=538, Percent_Identity=29.182156133829, Blast_Score=197, Evalue=1e-51, Organism=Escherichia coli, GI87081873, Length=368, Percent_Identity=23.3695652173913, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786604, Length=134, Percent_Identity=32.8358208955224, Blast_Score=69, Evalue=7e-13, Organism=Caenorhabditis elegans, GI32565753, Length=414, Percent_Identity=23.4299516908213, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI25147709, Length=431, Percent_Identity=22.969837587007, Blast_Score=84, Evalue=3e-16, Organism=Saccharomyces cerevisiae, GI6322245, Length=411, Percent_Identity=28.4671532846715, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6321726, Length=573, Percent_Identity=26.5270506108202, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6321731, Length=480, Percent_Identity=26.25, Blast_Score=148, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6319776, Length=480, Percent_Identity=26.25, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6324416, Length=295, Percent_Identity=30.8474576271186, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6322241, Length=295, Percent_Identity=30.8474576271186, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6322021, Length=295, Percent_Identity=30.8474576271186, Blast_Score=145, Evalue=1e-35, Organism=Drosophila melanogaster, GI24586587, Length=465, Percent_Identity=31.1827956989247, Blast_Score=199, Evalue=5e-51, Organism=Drosophila melanogaster, GI24586597, Length=473, Percent_Identity=32.1353065539112, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI221330053, Length=474, Percent_Identity=31.2236286919831, Blast_Score=191, Evalue=2e-48, Organism=Drosophila melanogaster, GI24586593, Length=549, Percent_Identity=28.5974499089253, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24586599, Length=580, Percent_Identity=27.7586206896552, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24586591, Length=467, Percent_Identity=28.6937901498929, Blast_Score=179, Evalue=3e-45, Organism=Drosophila melanogaster, GI24586589, Length=469, Percent_Identity=28.7846481876333, Blast_Score=174, Evalue=2e-43, Organism=Drosophila melanogaster, GI24583745, Length=526, Percent_Identity=28.5171102661597, Blast_Score=167, Evalue=1e-41, Organism=Drosophila melanogaster, GI24583747, Length=220, Percent_Identity=40.9090909090909, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24583749, Length=220, Percent_Identity=40.9090909090909, Blast_Score=166, Evalue=3e-41, Organism=Drosophila melanogaster, GI45549022, Length=472, Percent_Identity=27.5423728813559, Blast_Score=165, Evalue=9e-41, Organism=Drosophila melanogaster, GI281360393, Length=494, Percent_Identity=27.3279352226721, Blast_Score=142, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 63995; Mature: 63995
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIETGDLWWKNAVFYCADIETFYDWNGDGTVDIRGMTERIEYLFDLGVTCLWLMPFYP CCCCCCCCEEECCCEEEEEECCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC TARKDDGYDIIDFFGVDQRLGNLGDFVELVRTARSKGIRVIVDFVMNHTSDAHPWFKSAR CCCCCCCCEEHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHHHH RSKDDPYRDYYVWSETEPKSSPADVVFPDQEDSIWEQEPKTGEWYLHHFYKHQPDLNIAN CCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCC PKVQEEISRTLGFWLQLGVSGFRVDAVPFLFARDGVPGDPGVFDPYEYLGDVRNFVNRRV CHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GDAVLLGEVNVPYDDQKSFFGGPDGDGLNMQFDFIGMQNMYLSLARGDAGPIAAALRERP CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHCCC PLDETSQWANFVRNHDELTLDKLGDAERQEIFDAFGPERDMQLYGRGLRRRLPAMLGGDE CCCHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH RRMRMVYSLAFSLPGTPVLYYGEEIGMAENLDIPGRFAVRVPMQWTSDDNGGFSRAAARR HHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHH LPRPITDGLYGPDRVNVADQRHDHQSFWWFIRDLIYTYRQQPEIGWSTAEVLDQPNPAVL CCCCHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHH AHCCREKSGWTMVGLHNFGADRCMVPIQIEDAPEGSTLVDLLDGLSVHELDAKGRLEIGL HHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCEEEEE DGYGYRWLRLVRPGDDPII CCCCEEEEEEECCCCCCCC >Mature Secondary Structure MRKIETGDLWWKNAVFYCADIETFYDWNGDGTVDIRGMTERIEYLFDLGVTCLWLMPFYP CCCCCCCCEEECCCEEEEEECCEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCC TARKDDGYDIIDFFGVDQRLGNLGDFVELVRTARSKGIRVIVDFVMNHTSDAHPWFKSAR CCCCCCCCEEHHHCCHHHHHCCHHHHHHHHHHHHHCCCEEEEHHHHCCCCCCCHHHHHHH RSKDDPYRDYYVWSETEPKSSPADVVFPDQEDSIWEQEPKTGEWYLHHFYKHQPDLNIAN CCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCHHHCCCCCCCHHHHHHHHCCCCCCCCC PKVQEEISRTLGFWLQLGVSGFRVDAVPFLFARDGVPGDPGVFDPYEYLGDVRNFVNRRV CHHHHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC GDAVLLGEVNVPYDDQKSFFGGPDGDGLNMQFDFIGMQNMYLSLARGDAGPIAAALRERP CCEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCHHHHHHHCCC PLDETSQWANFVRNHDELTLDKLGDAERQEIFDAFGPERDMQLYGRGLRRRLPAMLGGDE CCCHHHHHHHHHHCCCCEEHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCH RRMRMVYSLAFSLPGTPVLYYGEEIGMAENLDIPGRFAVRVPMQWTSDDNGGFSRAAARR HHHHHHHHHHHCCCCCEEEEECHHCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHH LPRPITDGLYGPDRVNVADQRHDHQSFWWFIRDLIYTYRQQPEIGWSTAEVLDQPNPAVL CCCCHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHH AHCCREKSGWTMVGLHNFGADRCMVPIQIEDAPEGSTLVDLLDGLSVHELDAKGRLEIGL HHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCCCHHHHHHCCCCEEEECCCCCEEEEE DGYGYRWLRLVRPGDDPII CCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8645698 [H]