| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870690
Identifier: 119870690
GI number: 119870690
Start: 4889621
End: 4890214
Strand: Direct
Name: 119870690
Synonym: Mkms_4661
Alternate gene names: NA
Gene position: 4889621-4890214 (Clockwise)
Preceding gene: 119870689
Following gene: 119870696
Centisome position: 85.23
GC content: 70.88
Gene sequence:
>594_bases ATGCGCACCCACGGCTGGTCGGGTTCGGCGCCGGCCAGTGACGAGGAAGCCGTCGAACGGATTCTGGCCGCCGCCGGCCG GGCGATCGACGAACGCGGCGCCGACCTGAGCATCGCCGACGTCGCCCGCACCCTCGGAGTCACGCGCCAGACCGTCTACC GGTACTTCCCCAGCACCGAGGCGTTGCTCGTGGAGGCGGCGGTGCATGCCGCCGCCGATTTCCTCGACAGGTTGGCCGAA CACGTCCGGGGCATCACCGAACCCGCCGACGCGGTGACCGAGGCGATCGCCACCGCGTTGGAGTGGCTGCCCGAGGACAA GCACATCGGCCTGCTCGTCACGCCCGGTCGCGCCGACGCGCATTCGGAGTCGGTCACCTCCGATGTGGCGCTGCAGTTCG CCAAGGCGATGGTGCGGCGGTTCGACGTCGACTGGACCGGGCTCGGGTTCAGCGACCAGGATCTCGACGAGTTGGCCGAG TACCTGCTGCGCATCATCCAGTCGTTCGTCGTCGACCCCGGTCGCCCACCTCGCACGGGCGAGGCGCTGCGCGGGTTTCT GCGCCGCTGGGTAGGCGCCGCGGTCCGCCGCTGA
Upstream 100 bases:
>100_bases CTGGGCGAACCGCAACGGCTGCGGTCCGGGTGGATCAACGGCGTCAAGGAGCTGCCGGTCAGCTACCGGGGCTGAGGCGG GTCCCAAGTAGCATCTGCGC
Downstream 100 bases:
>100_bases GTCCCCTTTCCGAGATCGGTGCTCAGACCACCGTCAGCGGCAACGACTTTCGGTCCTCGAACTCCCACGACGCCCCGCCG CTGAACTTGCACACCTCGAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Tetr Family Transcriptional Regulator
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MRTHGWSGSAPASDEEAVERILAAAGRAIDERGADLSIADVARTLGVTRQTVYRYFPSTEALLVEAAVHAAADFLDRLAE HVRGITEPADAVTEAIATALEWLPEDKHIGLLVTPGRADAHSESVTSDVALQFAKAMVRRFDVDWTGLGFSDQDLDELAE YLLRIIQSFVVDPGRPPRTGEALRGFLRRWVGAAVRR
Sequences:
>Translated_197_residues MRTHGWSGSAPASDEEAVERILAAAGRAIDERGADLSIADVARTLGVTRQTVYRYFPSTEALLVEAAVHAAADFLDRLAE HVRGITEPADAVTEAIATALEWLPEDKHIGLLVTPGRADAHSESVTSDVALQFAKAMVRRFDVDWTGLGFSDQDLDELAE YLLRIIQSFVVDPGRPPRTGEALRGFLRRWVGAAVRR >Mature_197_residues MRTHGWSGSAPASDEEAVERILAAAGRAIDERGADLSIADVARTLGVTRQTVYRYFPSTEALLVEAAVHAAADFLDRLAE HVRGITEPADAVTEAIATALEWLPEDKHIGLLVTPGRADAHSESVTSDVALQFAKAMVRRFDVDWTGLGFSDQDLDELAE YLLRIIQSFVVDPGRPPRTGEALRGFLRRWVGAAVRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21505; Mature: 21505
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTHGWSGSAPASDEEAVERILAAAGRAIDERGADLSIADVARTLGVTRQTVYRYFPSTE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH ALLVEAAVHAAADFLDRLAEHVRGITEPADAVTEAIATALEWLPEDKHIGLLVTPGRADA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC HSESVTSDVALQFAKAMVRRFDVDWTGLGFSDQDLDELAEYLLRIIQSFVVDPGRPPRTG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC EALRGFLRRWVGAAVRR HHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTHGWSGSAPASDEEAVERILAAAGRAIDERGADLSIADVARTLGVTRQTVYRYFPSTE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHH ALLVEAAVHAAADFLDRLAEHVRGITEPADAVTEAIATALEWLPEDKHIGLLVTPGRADA HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCC HSESVTSDVALQFAKAMVRRFDVDWTGLGFSDQDLDELAEYLLRIIQSFVVDPGRPPRTG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC EALRGFLRRWVGAAVRR HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA