| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is cyp125 [H]
Identifier: 119870689
GI number: 119870689
Start: 4888360
End: 4889595
Strand: Direct
Name: cyp125 [H]
Synonym: Mkms_4660
Alternate gene names: 119870689
Gene position: 4888360-4889595 (Clockwise)
Preceding gene: 119870687
Following gene: 119870690
Centisome position: 85.2
GC content: 65.45
Gene sequence:
>1236_bases ATGACGACCATGGAGAGCCGATGCCCGTTCGGCCCCGGTTTCGACTTCACCGATCCCGACGTCCTGGTGCAGGGCATCCC GGTCAACGAGTTCGCGCAGCTGCGCAAGACCGCACCGGTCTGGTGGAACGAACAGCAGGAGTCGATCTTCGACGACGGTG GCTACTGGGTCATCAGCCGTCACGAGGACATCAAATCGATCTCGCGCAACGGTGACCTGTGGTCGACCAACGCCAAGGGT GCGGTCATGCGTCTGCCCGAAGGTGTCACCGCCGAGCAGCTCGACCTCACCAAGGCGTTGCTGATCAACCACGACGCCCC GGAACACACCCGGCTCCGCAAGATCGTGTCCCGGCTGTTCACGCCGCGCTCGGTCGCCGCGCTGGAGGAGAAGCTGGCGA TCTCCGCACGCCAGATCGTGGCCGCCGCACGGGAGAAGGGCAGCGGCGACTTCGTCACCGACATCGCGATGAGCCTGCCG CTGCAGGCGATCGCCGATCTGATCGGCGTCCCCGAAGCCGACCGGGAGAAGCTCTTCCACTGGACGAACTGCATCATGAA CACCGACGACCCGGATTTCGACTCCGATCCGACGGTCGCGAACGCCGAACTCATGGGCTACGCCTACAACATGGCCGAGG AGCGCAGGCGGTGCCCGGCCGACGACATCGTCACCCGCCTCATCCAGGCCGATATCGACGGGGAATCCCTCGGTGACGTC GAGTTCGCATTCTTCGTGATCCTGCTCGCGGTGGCCGGCAACGAGACCACCCGCAACGCGATGACCCACGGCATGAACGC GTTCTTCGAGCACCCCGACCAGTGGGAGCTGTTCGTCCGGGAACGCCCCGAGACCGCGGTCGACGAGATCGTGCGCTGGG CCACCCCGGTGCACTGCTTCCAGCGCACCGCGCTGGCCGACGTCGAACTCGGCGGGGTGACCATCCGCGAGGGACAGCGC GCAGGCCTGTTCTACAGCTCGGCGAACTACGACGAGGACGTCTTCCAGTCGCCCTTCGAATTCGACATCCTGCGCGATCC CAACCCGCATCTCGGGTTCGGCGGCAACGGCGCCCACTACTGCATCGGCGCCAACCTGGCCCGCATGGAGATCAAGCTGA TCTTCAACGAGTTGGCCGACCAGATTCCGGACATCGCGAAACTGGGCGAACCGCAACGGCTGCGGTCCGGGTGGATCAAC GGCGTCAAGGAGCTGCCGGTCAGCTACCGGGGCTGA
Upstream 100 bases:
>100_bases CGCACATGTGCACCCTAAACCCCGCGCTGGGCATACAGGTCACGGCGAAGTGTATGGTCGTGGGTGAGCGTGTTCAGCGT CACACTGAGAGGCGGCCGTC
Downstream 100 bases:
>100_bases GGCGGGTCCCAAGTAGCATCTGCGCATGCGCACCCACGGCTGGTCGGGTTCGGCGCCGGCCAGTGACGAGGAAGCCGTCG AACGGATTCTGGCCGCCGCC
Product: cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MTTMESRCPFGPGFDFTDPDVLVQGIPVNEFAQLRKTAPVWWNEQQESIFDDGGYWVISRHEDIKSISRNGDLWSTNAKG AVMRLPEGVTAEQLDLTKALLINHDAPEHTRLRKIVSRLFTPRSVAALEEKLAISARQIVAAAREKGSGDFVTDIAMSLP LQAIADLIGVPEADREKLFHWTNCIMNTDDPDFDSDPTVANAELMGYAYNMAEERRRCPADDIVTRLIQADIDGESLGDV EFAFFVILLAVAGNETTRNAMTHGMNAFFEHPDQWELFVRERPETAVDEIVRWATPVHCFQRTALADVELGGVTIREGQR AGLFYSSANYDEDVFQSPFEFDILRDPNPHLGFGGNGAHYCIGANLARMEIKLIFNELADQIPDIAKLGEPQRLRSGWIN GVKELPVSYRG
Sequences:
>Translated_411_residues MTTMESRCPFGPGFDFTDPDVLVQGIPVNEFAQLRKTAPVWWNEQQESIFDDGGYWVISRHEDIKSISRNGDLWSTNAKG AVMRLPEGVTAEQLDLTKALLINHDAPEHTRLRKIVSRLFTPRSVAALEEKLAISARQIVAAAREKGSGDFVTDIAMSLP LQAIADLIGVPEADREKLFHWTNCIMNTDDPDFDSDPTVANAELMGYAYNMAEERRRCPADDIVTRLIQADIDGESLGDV EFAFFVILLAVAGNETTRNAMTHGMNAFFEHPDQWELFVRERPETAVDEIVRWATPVHCFQRTALADVELGGVTIREGQR AGLFYSSANYDEDVFQSPFEFDILRDPNPHLGFGGNGAHYCIGANLARMEIKLIFNELADQIPDIAKLGEPQRLRSGWIN GVKELPVSYRG >Mature_410_residues TTMESRCPFGPGFDFTDPDVLVQGIPVNEFAQLRKTAPVWWNEQQESIFDDGGYWVISRHEDIKSISRNGDLWSTNAKGA VMRLPEGVTAEQLDLTKALLINHDAPEHTRLRKIVSRLFTPRSVAALEEKLAISARQIVAAAREKGSGDFVTDIAMSLPL QAIADLIGVPEADREKLFHWTNCIMNTDDPDFDSDPTVANAELMGYAYNMAEERRRCPADDIVTRLIQADIDGESLGDVE FAFFVILLAVAGNETTRNAMTHGMNAFFEHPDQWELFVRERPETAVDEIVRWATPVHCFQRTALADVELGGVTIREGQRA GLFYSSANYDEDVFQSPFEFDILRDPNPHLGFGGNGAHYCIGANLARMEIKLIFNELADQIPDIAKLGEPQRLRSGWING VKELPVSYRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45974; Mature: 45843
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTMESRCPFGPGFDFTDPDVLVQGIPVNEFAQLRKTAPVWWNEQQESIFDDGGYWVISR CCCCCCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEC HEDIKSISRNGDLWSTNAKGAVMRLPEGVTAEQLDLTKALLINHDAPEHTRLRKIVSRLF CHHHHHHHCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC TPRSVAALEEKLAISARQIVAAAREKGSGDFVTDIAMSLPLQAIADLIGVPEADREKLFH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH WTNCIMNTDDPDFDSDPTVANAELMGYAYNMAEERRRCPADDIVTRLIQADIDGESLGDV HHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH EFAFFVILLAVAGNETTRNAMTHGMNAFFEHPDQWELFVRERPETAVDEIVRWATPVHCF HHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHH QRTALADVELGGVTIREGQRAGLFYSSANYDEDVFQSPFEFDILRDPNPHLGFGGNGAHY HHHHHCEEEECCEEEECCCCCCEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCEE CIGANLARMEIKLIFNELADQIPDIAKLGEPQRLRSGWINGVKELPVSYRG EECCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCCC >Mature Secondary Structure TTMESRCPFGPGFDFTDPDVLVQGIPVNEFAQLRKTAPVWWNEQQESIFDDGGYWVISR CCCCCCCCCCCCCCCCCHHHEEECCCHHHHHHHHHCCCCCCCCCHHHHHCCCCEEEEEC HEDIKSISRNGDLWSTNAKGAVMRLPEGVTAEQLDLTKALLINHDAPEHTRLRKIVSRLF CHHHHHHHCCCCEEECCCCCEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHC TPRSVAALEEKLAISARQIVAAAREKGSGDFVTDIAMSLPLQAIADLIGVPEADREKLFH CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHH WTNCIMNTDDPDFDSDPTVANAELMGYAYNMAEERRRCPADDIVTRLIQADIDGESLGDV HHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHH EFAFFVILLAVAGNETTRNAMTHGMNAFFEHPDQWELFVRERPETAVDEIVRWATPVHCF HHHHHHHHHHHCCCCHHHHHHHHCCHHHHCCCCCEEHHHHCCCHHHHHHHHHHHHHHHHH QRTALADVELGGVTIREGQRAGLFYSSANYDEDVFQSPFEFDILRDPNPHLGFGGNGAHY HHHHHCEEEECCEEEECCCCCCEEEECCCCCHHHHCCCCCEEEECCCCCCCCCCCCCCEE CIGANLARMEIKLIFNELADQIPDIAKLGEPQRLRSGWINGVKELPVSYRG EECCCCHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]