| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
Click here to switch to the map view.
The map label for this gene is 119870557
Identifier: 119870557
GI number: 119870557
Start: 4760667
End: 4762037
Strand: Direct
Name: 119870557
Synonym: Mkms_4528
Alternate gene names: NA
Gene position: 4760667-4762037 (Clockwise)
Preceding gene: 119870556
Following gene: 119870558
Centisome position: 82.98
GC content: 69.51
Gene sequence:
>1371_bases ATGCTCGAGGCCGACTACCTCGTCGTCGGCGCGGGGGCGATGGGGATGGCGTTCGTCGACACGCTGATCGCCGAGTCCGA CGCCACCGTCGTGATCGTCGACCGCAACCACGCACCCGGCGGACACTGGACCACCGCGTATCCGTTCGTGCGGCTGCACC AGCCGTCGGCGTACTACGGCGTGAACTCCCGTCAGCTCGGCAGCGGCGCGATCGACCAGAGCGGACCCAACGCGGGGTTT CACGAACTGGCAGGCGGCGCGGAGGTGTGCGCGTACTACGAGGCGGTGATGCGCCGCCAGTTGCTGCCGACCGGCCGGGT CACCTATCTGCCGATGACCGAGTACCTCGGCGGCGGCCGGGTCCGCACACTCGGCGGCGACGAGGTCTCGGTCGCGGCGC GGCGCACGGTGGTCAGCCACATCGACGTCGTGGTGCCCTCGATGCGGCCGCCGGCCTACGGCGTGGCGGCCGGGGTGGAG TGTGTGCCGCCGAACGCGCTGCCCTGGCTGCGCGGGGTGTACGACCGCTACGTCATCGTCGGCGCAGGCAAGACCGCGAT GGACGCCTGCGTGTTCCTGCTCCGGCACGGGGTAGACGCGCAGCGGTTGACGTGGATCAAACCGCGTGAGGCGTGGCTGA TGGACCGGGCGACCGTGCAGCCCGGCGCGCAGTTCGCCAAGCGTGCGCTCGCCGACTTCACCGCCCAGTTGGTGGCGGTC CGGGATGCGACGTCGTTCGCCGACCTGTTCGGCCGGCTGGAATCGAAGGGGTCCCTGCTGCGGATCGACGAATCGGTGGA GCCCACGATGTACCGCTGCGCGATCGTGTCGCAGGGCGAGCGGGAGATGCTGCGCGGCATCGAGGACGTGGTGCGGCTCG GCCATGTGACCGCGATCGAACCCGGACGCGTCACCCTGGAGAACGGGGTGGTCGAGGTCGACGGATCGGCGCTCTACGTC GACTGCACGGCCGACGGGCTCGGGGACAAGGCGCCGGTGCCGGTGTTCGACGGTGACCGGATCACCCTGCAGACCGTCCG CACCTGCCAGCCGGCGTTCAGCGCGTCGGTCATCGGTCACGTCGAGGCGGCCTACAGGGACGACGACACCCGCAACGCAT TCTGCGGGCCGGTTCCCTACCCCCACGTACCCGCCGACTGGCTGCGGATGATGTTGGCGTTCAACCGGAATCAGCTTCAG TGGTTCGCTGACCCGGACATGATGGCGTGGGTCGACGGCGCCCGGCTCAACATCCTGCACCACATCACCGCGGGGGTGAG CGAGCGGGCGCGCGAGCGGATCATCGGCATGCTGGGCTCGCAGTTGCACGACCTCAACGACAAGCTCGAGGCTTTGCTCA CCGAAGTGTGA
Upstream 100 bases:
>100_bases CATTGGACCGACATGCCCCGCGGCGGGCACTTCGCCGCGTTCGAGCAGCCCGAGTTGTTCGCCGACGACGTCACCGCGTT CTTCGACAGCGTGCGCTGAC
Downstream 100 bases:
>100_bases ACTTCGCGTCCGGTGGCCGTCGGTATCTGGTTAAGTTTGCCAAGGGAAGTACTTTCGATCAGTTGTGAGCCGGGGGCGGG GAAGATGGCGGCGGCGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 456
Protein sequence:
>456_residues MLEADYLVVGAGAMGMAFVDTLIAESDATVVIVDRNHAPGGHWTTAYPFVRLHQPSAYYGVNSRQLGSGAIDQSGPNAGF HELAGGAEVCAYYEAVMRRQLLPTGRVTYLPMTEYLGGGRVRTLGGDEVSVAARRTVVSHIDVVVPSMRPPAYGVAAGVE CVPPNALPWLRGVYDRYVIVGAGKTAMDACVFLLRHGVDAQRLTWIKPREAWLMDRATVQPGAQFAKRALADFTAQLVAV RDATSFADLFGRLESKGSLLRIDESVEPTMYRCAIVSQGEREMLRGIEDVVRLGHVTAIEPGRVTLENGVVEVDGSALYV DCTADGLGDKAPVPVFDGDRITLQTVRTCQPAFSASVIGHVEAAYRDDDTRNAFCGPVPYPHVPADWLRMMLAFNRNQLQ WFADPDMMAWVDGARLNILHHITAGVSERARERIIGMLGSQLHDLNDKLEALLTEV
Sequences:
>Translated_456_residues MLEADYLVVGAGAMGMAFVDTLIAESDATVVIVDRNHAPGGHWTTAYPFVRLHQPSAYYGVNSRQLGSGAIDQSGPNAGF HELAGGAEVCAYYEAVMRRQLLPTGRVTYLPMTEYLGGGRVRTLGGDEVSVAARRTVVSHIDVVVPSMRPPAYGVAAGVE CVPPNALPWLRGVYDRYVIVGAGKTAMDACVFLLRHGVDAQRLTWIKPREAWLMDRATVQPGAQFAKRALADFTAQLVAV RDATSFADLFGRLESKGSLLRIDESVEPTMYRCAIVSQGEREMLRGIEDVVRLGHVTAIEPGRVTLENGVVEVDGSALYV DCTADGLGDKAPVPVFDGDRITLQTVRTCQPAFSASVIGHVEAAYRDDDTRNAFCGPVPYPHVPADWLRMMLAFNRNQLQ WFADPDMMAWVDGARLNILHHITAGVSERARERIIGMLGSQLHDLNDKLEALLTEV >Mature_456_residues MLEADYLVVGAGAMGMAFVDTLIAESDATVVIVDRNHAPGGHWTTAYPFVRLHQPSAYYGVNSRQLGSGAIDQSGPNAGF HELAGGAEVCAYYEAVMRRQLLPTGRVTYLPMTEYLGGGRVRTLGGDEVSVAARRTVVSHIDVVVPSMRPPAYGVAAGVE CVPPNALPWLRGVYDRYVIVGAGKTAMDACVFLLRHGVDAQRLTWIKPREAWLMDRATVQPGAQFAKRALADFTAQLVAV RDATSFADLFGRLESKGSLLRIDESVEPTMYRCAIVSQGEREMLRGIEDVVRLGHVTAIEPGRVTLENGVVEVDGSALYV DCTADGLGDKAPVPVFDGDRITLQTVRTCQPAFSASVIGHVEAAYRDDDTRNAFCGPVPYPHVPADWLRMMLAFNRNQLQ WFADPDMMAWVDGARLNILHHITAGVSERARERIIGMLGSQLHDLNDKLEALLTEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49664; Mature: 49664
Theoretical pI: Translated: 5.59; Mature: 5.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEADYLVVGAGAMGMAFVDTLIAESDATVVIVDRNHAPGGHWTTAYPFVRLHQPSAYYG CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEC VNSRQLGSGAIDQSGPNAGFHELAGGAEVCAYYEAVMRRQLLPTGRVTYLPMTEYLGGGR CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCE VRTLGGDEVSVAARRTVVSHIDVVVPSMRPPAYGVAAGVECVPPNALPWLRGVYDRYVIV EEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEECCCCCCHHHHHHHHCEEEE GAGKTAMDACVFLLRHGVDAQRLTWIKPREAWLMDRATVQPGAQFAKRALADFTAQLVAV ECCHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RDATSFADLFGRLESKGSLLRIDESVEPTMYRCAIVSQGEREMLRGIEDVVRLGHVTAIE HCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEC PGRVTLENGVVEVDGSALYVDCTADGLGDKAPVPVFDGDRITLQTVRTCQPAFSASVIGH CCCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEECCCEEEEEEHHHCCHHHHHHHHHH VEAAYRDDDTRNAFCGPVPYPHVPADWLRMMLAFNRNQLQWFADPDMMAWVDGARLNILH HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEHHH HITAGVSERARERIIGMLGSQLHDLNDKLEALLTEV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLEADYLVVGAGAMGMAFVDTLIAESDATVVIVDRNHAPGGHWTTAYPFVRLHQPSAYYG CCCCCEEEEECCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCEEC VNSRQLGSGAIDQSGPNAGFHELAGGAEVCAYYEAVMRRQLLPTGRVTYLPMTEYLGGGR CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHCCCCE VRTLGGDEVSVAARRTVVSHIDVVVPSMRPPAYGVAAGVECVPPNALPWLRGVYDRYVIV EEECCCCCHHHHHHHHHHHHHHHEECCCCCCCCHHHCCCEECCCCCCHHHHHHHHCEEEE GAGKTAMDACVFLLRHGVDAQRLTWIKPREAWLMDRATVQPGAQFAKRALADFTAQLVAV ECCHHHHHHHHHHHHCCCCHHHEEEECCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RDATSFADLFGRLESKGSLLRIDESVEPTMYRCAIVSQGEREMLRGIEDVVRLGHVTAIE HCHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCEEEEC PGRVTLENGVVEVDGSALYVDCTADGLGDKAPVPVFDGDRITLQTVRTCQPAFSASVIGH CCCEEEECCEEEECCCEEEEEECCCCCCCCCCCCEECCCEEEEEEHHHCCHHHHHHHHHH VEAAYRDDDTRNAFCGPVPYPHVPADWLRMMLAFNRNQLQWFADPDMMAWVDGARLNILH HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEECCCEEEEECCCCEEHHH HITAGVSERARERIIGMLGSQLHDLNDKLEALLTEV HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]