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The map label for this gene is yhfK [H]

Identifier: 119870540

GI number: 119870540

Start: 4744102

End: 4744761

Strand: Direct

Name: yhfK [H]

Synonym: Mkms_4511

Alternate gene names: 119870540

Gene position: 4744102-4744761 (Clockwise)

Preceding gene: 119870539

Following gene: 119870548

Centisome position: 82.69

GC content: 72.42

Gene sequence:

>660_bases
ATGAGAGTGGTGATCGCCGGAGGGCACGGCAAGATCGCGATGCAGGTCGAGCAATTGTTGGCGCAACGCGGCGACACCGC
GGTCGGGCTGATCCGCAACCCCGACCATGCCGGAGACCTCGAAGCCATCGGTGCGGAGCCGCTGGTGTTGGACCTGGAGA
AGGCCACCGTCGGAGAGGTGATCGACGCGCTGCGCGGCGCCGACGCCGTGGTCTTCGCGGCCGGCGCAGGGCCGGGCAGC
GGAGCCGCACGCAAGGAGACCGTCGACCGCGATGCCGCCATCCTGCTGGCCGACGCCGCCGAGGCCGCGGGCGTCAAGCG
CTACGTGGTGATCTCCTCGATGGGTGCGAACACCGAGGCGCCCGACGACGCCGGTGATCCGGTGTTCGTGACCTATCTGC
GGGCCAAGGGCGCCGCGGACGACGCCGTCCGGTCCCGGCGCGCACTCGATACGACGATCGTGCGGCCGGGCCGGCTCACC
GACGATCCGGGCACCGGCCGGGTGCACATCGCGGACTCCACCGGTTACGGCGCCATCCCCCGCGAGGACGTCGCCGCCGT
GCTGCTCGCAGTCCTCGACACACCGGGCACCGTGGGCCGCACCTTCGAGCTGGTCGGCGGCGACACCCCGATCGACGAGG
CCGTCGCCGCGGGCGGCTGA

Upstream 100 bases:

>100_bases
AGCGGTGGACGATGTTTCTGCTCGGCCATGCGGGGAATGCTCGGGAATTCAAGGCTTTTTCGCCGATCGCCCGCAGGTTT
TCGCGGGATAGGAGGTTCTG

Downstream 100 bases:

>100_bases
CTGTATCGGCCACGGCGAACTGCTCACGACCCCTTGGCTCGGGCCCCCGCGGAGGCCCGGATCTCGTCCGCGACGACGTC
GGGGTGTGTGTACGGGATCA

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MRVVIAGGHGKIAMQVEQLLAQRGDTAVGLIRNPDHAGDLEAIGAEPLVLDLEKATVGEVIDALRGADAVVFAAGAGPGS
GAARKETVDRDAAILLADAAEAAGVKRYVVISSMGANTEAPDDAGDPVFVTYLRAKGAADDAVRSRRALDTTIVRPGRLT
DDPGTGRVHIADSTGYGAIPREDVAAVLLAVLDTPGTVGRTFELVGGDTPIDEAVAAGG

Sequences:

>Translated_219_residues
MRVVIAGGHGKIAMQVEQLLAQRGDTAVGLIRNPDHAGDLEAIGAEPLVLDLEKATVGEVIDALRGADAVVFAAGAGPGS
GAARKETVDRDAAILLADAAEAAGVKRYVVISSMGANTEAPDDAGDPVFVTYLRAKGAADDAVRSRRALDTTIVRPGRLT
DDPGTGRVHIADSTGYGAIPREDVAAVLLAVLDTPGTVGRTFELVGGDTPIDEAVAAGG
>Mature_219_residues
MRVVIAGGHGKIAMQVEQLLAQRGDTAVGLIRNPDHAGDLEAIGAEPLVLDLEKATVGEVIDALRGADAVVFAAGAGPGS
GAARKETVDRDAAILLADAAEAAGVKRYVVISSMGANTEAPDDAGDPVFVTYLRAKGAADDAVRSRRALDTTIVRPGRLT
DDPGTGRVHIADSTGYGAIPREDVAAVLLAVLDTPGTVGRTFELVGGDTPIDEAVAAGG

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323737, Length=228, Percent_Identity=36.4035087719298, Blast_Score=114, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR008030 [H]

Pfam domain/function: PF05368 NmrA [H]

EC number: NA

Molecular weight: Translated: 22198; Mature: 22198

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVVIAGGHGKIAMQVEQLLAQRGDTAVGLIRNPDHAGDLEAIGAEPLVLDLEKATVGEV
CEEEEECCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCEEEEECHHHHHHH
IDALRGADAVVFAAGAGPGSGAARKETVDRDAAILLADAAEAAGVKRYVVISSMGANTEA
HHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCHHHCCCEEEEEEEECCCCCCC
PDDAGDPVFVTYLRAKGAADDAVRSRRALDTTIVRPGRLTDDPGTGRVHIADSTGYGAIP
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCCCC
REDVAAVLLAVLDTPGTVGRTFELVGGDTPIDEAVAAGG
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCCC
>Mature Secondary Structure
MRVVIAGGHGKIAMQVEQLLAQRGDTAVGLIRNPDHAGDLEAIGAEPLVLDLEKATVGEV
CEEEEECCCCEEHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCEEEEECHHHHHHH
IDALRGADAVVFAAGAGPGSGAARKETVDRDAAILLADAAEAAGVKRYVVISSMGANTEA
HHHHCCCCEEEEEECCCCCCCCCHHHHCCCCEEEEEECCHHHCCCEEEEEEEECCCCCCC
PDDAGDPVFVTYLRAKGAADDAVRSRRALDTTIVRPGRLTDDPGTGRVHIADSTGYGAIP
CCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCEEEEECCCCCCCCC
REDVAAVLLAVLDTPGTVGRTFELVGGDTPIDEAVAAGG
HHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]