| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870419
Identifier: 119870419
GI number: 119870419
Start: 4609617
End: 4611344
Strand: Direct
Name: 119870419
Synonym: Mkms_4390
Alternate gene names: NA
Gene position: 4609617-4611344 (Clockwise)
Preceding gene: 119870410
Following gene: 119870420
Centisome position: 80.35
GC content: 71.93
Gene sequence:
>1728_bases TTGGCTGATCCGGTGCGCATCGGCAACTGCTCGGGCTTCTACGGAGACCGCCTGGCCGCGATGCGGGAGATGCTCACCGG CGGTGAGCTCGACTTCCTCACCGGCGACTACCTCGCCGAACTGACCATGCTCATCCTGGCCCGCGACCGGGCGAAGAACC CCGACCGCGGCTACGCCAAGACGTTCCTCACCCAGCTCGAGGACTGCCTCGGCCTCGCCCTCGACCGCGGGGTCCGCATC GTCACCAACGCCGGCGGGCTCAACCCGGCCGGGCTGGCCGCCGCGGTGCGCACACTCGCCGAACACCTCGGCCTGTCCGT CAACGTCGCCCATGTCGAAGGCGACGACCTGATCGCCCGCGCCGGCGAACTCGGCTTCGGCACGCCGCTGGCCGCCAACG CCTACCTCGGCGCGTGGGGCATCGTCGACTGCCTCGACGCCGGCGCCGACGTCGTGGTGACGGGTCGTGTCACGGACGCG TCGGTCACGCTCGGACCCGCCGCCGCCCACTTCGGCTGGGGGCGCACCGACTACGACGCGCTCGCCGGAGCCGTCGCCGC CGGGCACGTCATCGAATGCGGTGTGCAGGCCAGCGGCGGCAACTACGCGTTCTTCACGGAGCTACCCGACCTCACCCACC CCGGCTTCCCGCTGGCCGAGATCCACGCCGACGGATCGTCGGTGATCACCAAGCACCCGGGCGGCGGCGCGGTCACCGTC GACACCGTCACCGCACAGCTGCTCTACGAGATCTCCGGCGCGCGCTACGCCAACCCCGACGTCACCCTGCGCGTCGACTC CCTGGACCTGAAGGCCGACGGACCCGACCGGGTGCGGATCAGCGGCGTCCGCGGTGAGCCACCACCGCCGACGCTGAAGG TATCGCTGAACAGCGTGGGCGGCTTCCGCAACGCGATGACGTTCGTGCTCACCGGACTCGACATCGAGGCGAAGGCCGAC CTCGTGCGCCGCCAACTCGAAGCCGGGCTGACGACGAAACCCGCCGAGCTCGAGTGGACGCTGGCCCGCACCGACCATGT GGACGCCGACACCGAGGAGACGGCCAGCGCACTGCTGCGCTGCGTGGTGCGCGACCCGGACCCGGCCGCCGTCGGACGGC AGTTCTCCTCTGCTGCAGTCGAACTCGCACTGGCGAGCTACCCCGGCTTCCACGTCACCGCCCCGCCGGGCGATGGCCAG GTCTACGGTGTGTTCACCCCCGGTTACGTCGAGGCCGCCGAGGTGCCGCACGTCGCGGTGCACGCCGACGGCACGCGTAC CGAGATCCCCGCCGCCTCGGACACCCGTGAGCCGGCGCCGGTCGACGAGCCCGCGTTGCCCGAACCGCTGCCGCCGGGAC CGACGCGACGGGCGCCCCTGGGTCTGGTGGCCGGTGCGCGCAGCGGGGACAAGGGCGGCAGCGCCAACATCGGGGTGTGG GTGCGCGCCGGGGCGAGCGAAGCGACGGGAAACAAGGCAGATGCGCAGTGGCGCTGGCTCGCGCACACCCTGACCGTCGA CCTCCTGCGCGAACTCCTCCCCGAGACCGCCGACCTGCCGGTGACCCGTCACGTGCTGCCGAACCTGCGGGCGGTCAACT TCGTCGTCGACGGCATCCTCGGCCAGGGCGTGGCCTACCAGGCCCGGTTCGACCCGCAGGCCAAGGGGCTCGGCGAATGG TTGCGCAGCCGTCATCTCGAGATCCCCGAGGAGGTGCTGCCCCGGTGA
Upstream 100 bases:
>100_bases ACCAATCGCGCGCGAATCCTTGACGTGGAACCGGCAGTACCGGCTAACCTACCGGTTGGTTGGCCGTCGACGACGATTGG AGCCGGCATGGGAGCACGGG
Downstream 100 bases:
>100_bases GCATCTGGGACACCCCCGAACGCGACCAGTTGCGAAAGACGGTGCGCGCGTTCGCAGACCGCGAGGTGCTTCCGCACGTC GACGAGTGGGAGCGCGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 575; Mature: 574
Protein sequence:
>575_residues MADPVRIGNCSGFYGDRLAAMREMLTGGELDFLTGDYLAELTMLILARDRAKNPDRGYAKTFLTQLEDCLGLALDRGVRI VTNAGGLNPAGLAAAVRTLAEHLGLSVNVAHVEGDDLIARAGELGFGTPLAANAYLGAWGIVDCLDAGADVVVTGRVTDA SVTLGPAAAHFGWGRTDYDALAGAVAAGHVIECGVQASGGNYAFFTELPDLTHPGFPLAEIHADGSSVITKHPGGGAVTV DTVTAQLLYEISGARYANPDVTLRVDSLDLKADGPDRVRISGVRGEPPPPTLKVSLNSVGGFRNAMTFVLTGLDIEAKAD LVRRQLEAGLTTKPAELEWTLARTDHVDADTEETASALLRCVVRDPDPAAVGRQFSSAAVELALASYPGFHVTAPPGDGQ VYGVFTPGYVEAAEVPHVAVHADGTRTEIPAASDTREPAPVDEPALPEPLPPGPTRRAPLGLVAGARSGDKGGSANIGVW VRAGASEATGNKADAQWRWLAHTLTVDLLRELLPETADLPVTRHVLPNLRAVNFVVDGILGQGVAYQARFDPQAKGLGEW LRSRHLEIPEEVLPR
Sequences:
>Translated_575_residues MADPVRIGNCSGFYGDRLAAMREMLTGGELDFLTGDYLAELTMLILARDRAKNPDRGYAKTFLTQLEDCLGLALDRGVRI VTNAGGLNPAGLAAAVRTLAEHLGLSVNVAHVEGDDLIARAGELGFGTPLAANAYLGAWGIVDCLDAGADVVVTGRVTDA SVTLGPAAAHFGWGRTDYDALAGAVAAGHVIECGVQASGGNYAFFTELPDLTHPGFPLAEIHADGSSVITKHPGGGAVTV DTVTAQLLYEISGARYANPDVTLRVDSLDLKADGPDRVRISGVRGEPPPPTLKVSLNSVGGFRNAMTFVLTGLDIEAKAD LVRRQLEAGLTTKPAELEWTLARTDHVDADTEETASALLRCVVRDPDPAAVGRQFSSAAVELALASYPGFHVTAPPGDGQ VYGVFTPGYVEAAEVPHVAVHADGTRTEIPAASDTREPAPVDEPALPEPLPPGPTRRAPLGLVAGARSGDKGGSANIGVW VRAGASEATGNKADAQWRWLAHTLTVDLLRELLPETADLPVTRHVLPNLRAVNFVVDGILGQGVAYQARFDPQAKGLGEW LRSRHLEIPEEVLPR >Mature_574_residues ADPVRIGNCSGFYGDRLAAMREMLTGGELDFLTGDYLAELTMLILARDRAKNPDRGYAKTFLTQLEDCLGLALDRGVRIV TNAGGLNPAGLAAAVRTLAEHLGLSVNVAHVEGDDLIARAGELGFGTPLAANAYLGAWGIVDCLDAGADVVVTGRVTDAS VTLGPAAAHFGWGRTDYDALAGAVAAGHVIECGVQASGGNYAFFTELPDLTHPGFPLAEIHADGSSVITKHPGGGAVTVD TVTAQLLYEISGARYANPDVTLRVDSLDLKADGPDRVRISGVRGEPPPPTLKVSLNSVGGFRNAMTFVLTGLDIEAKADL VRRQLEAGLTTKPAELEWTLARTDHVDADTEETASALLRCVVRDPDPAAVGRQFSSAAVELALASYPGFHVTAPPGDGQV YGVFTPGYVEAAEVPHVAVHADGTRTEIPAASDTREPAPVDEPALPEPLPPGPTRRAPLGLVAGARSGDKGGSANIGVWV RAGASEATGNKADAQWRWLAHTLTVDLLRELLPETADLPVTRHVLPNLRAVNFVVDGILGQGVAYQARFDPQAKGLGEWL RSRHLEIPEEVLPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60373; Mature: 60241
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADPVRIGNCSGFYGDRLAAMREMLTGGELDFLTGDYLAELTMLILARDRAKNPDRGYAK CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHH TFLTQLEDCLGLALDRGVRIVTNAGGLNPAGLAAAVRTLAEHLGLSVNVAHVEGDDLIAR HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHH AGELGFGTPLAANAYLGAWGIVDCLDAGADVVVTGRVTDASVTLGPAAAHFGWGRTDYDA CCCCCCCCCCCCCCHHCHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHCCCCCCCHHH LAGAVAAGHVIECGVQASGGNYAFFTELPDLTHPGFPLAEIHADGSSVITKHPGGGAVTV HHHHHHHCCEEEECEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEH DTVTAQLLYEISGARYANPDVTLRVDSLDLKADGPDRVRISGVRGEPPPPTLKVSLNSVG HHHHHHHHHHHCCCEECCCCEEEEEECEEECCCCCCEEEEECCCCCCCCCEEEEEECCCC GFRNAMTFVLTGLDIEAKADLVRRQLEAGLTTKPAELEWTLARTDHVDADTEETASALLR CHHHEEEHEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH CVVRDPDPAAVGRQFSSAAVELALASYPGFHVTAPPGDGQVYGVFTPGYVEAAEVPHVAV HHHCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCEEEEEECCCCEECCCCCEEEE HADGTRTEIPAASDTREPAPVDEPALPEPLPPGPTRRAPLGLVAGARSGDKGGSANIGVW ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE VRAGASEATGNKADAQWRWLAHTLTVDLLRELLPETADLPVTRHVLPNLRAVNFVVDGIL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHH GQGVAYQARFDPQAKGLGEWLRSRHLEIPEEVLPR CCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCC >Mature Secondary Structure ADPVRIGNCSGFYGDRLAAMREMLTGGELDFLTGDYLAELTMLILARDRAKNPDRGYAK CCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHH TFLTQLEDCLGLALDRGVRIVTNAGGLNPAGLAAAVRTLAEHLGLSVNVAHVEGDDLIAR HHHHHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCHHHHH AGELGFGTPLAANAYLGAWGIVDCLDAGADVVVTGRVTDASVTLGPAAAHFGWGRTDYDA CCCCCCCCCCCCCCHHCHHHHHHHHCCCCCEEEEEEEECCEEEECCHHHHCCCCCCCHHH LAGAVAAGHVIECGVQASGGNYAFFTELPDLTHPGFPLAEIHADGSSVITKHPGGGAVTV HHHHHHHCCEEEECEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEEEEECCCCCEEEH DTVTAQLLYEISGARYANPDVTLRVDSLDLKADGPDRVRISGVRGEPPPPTLKVSLNSVG HHHHHHHHHHHCCCEECCCCEEEEEECEEECCCCCCEEEEECCCCCCCCCEEEEEECCCC GFRNAMTFVLTGLDIEAKADLVRRQLEAGLTTKPAELEWTLARTDHVDADTEETASALLR CHHHEEEHEEECCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH CVVRDPDPAAVGRQFSSAAVELALASYPGFHVTAPPGDGQVYGVFTPGYVEAAEVPHVAV HHHCCCCHHHHHHHHHHHHHEEEEECCCCEEEECCCCCCEEEEEECCCCEECCCCCEEEE HADGTRTEIPAASDTREPAPVDEPALPEPLPPGPTRRAPLGLVAGARSGDKGGSANIGVW ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEE VRAGASEATGNKADAQWRWLAHTLTVDLLRELLPETADLPVTRHVLPNLRAVNFVVDGIL EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHH GQGVAYQARFDPQAKGLGEWLRSRHLEIPEEVLPR CCCEEEEECCCCCHHHHHHHHHHCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA