| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870372
Identifier: 119870372
GI number: 119870372
Start: 4560967
End: 4562217
Strand: Direct
Name: 119870372
Synonym: Mkms_4343
Alternate gene names: NA
Gene position: 4560967-4562217 (Clockwise)
Preceding gene: 119870370
Following gene: 119870373
Centisome position: 79.5
GC content: 70.18
Gene sequence:
>1251_bases ATGGCGGCACCCGAACACCACGACACCGACAACACCCAGCCACCACCTCCCGTGCGGCCCACCCCGCCTGGGGGTGGCTT GGGCAGCGTGTTGGGCCCGCTCGAACGCACCGGCCGGTTTTACGCGGAATCGTGGCGCGACTACCTCGATCGGTCCGACC GGACGGTTCCGGTCGCGCGGCCGACGCTCTCGCTGGCCAGCCACGCGCTGCGGGATGAGATCGTGCTCCTCGGATTGCGG GCGCGCCGCCCGCTCAGCGACCCGGGCACGTTCTCGCGCATCACCCGTGAAGTGGAGGCGGCGGTCGACTTCTACGGGGA GAGGGGCTGGCTCGACGATCCGACGCGGTTCTTCGCACCGCCGCCTCCGTTGACCGACATCTCGATTCAGCGGGTGAAAT CCGCCAGACACACTCACCAGCGCCTGGTGTTCGACAGCGGATACGCACCGCATCCCGGGGAGCCGGGCGCCGAACGCTGG CAGACCTATACCGCCAACCGGCGCTGCTACGGGTTGATGCTGCGCCACCGGGAGCCCCGGCCCTGGCTGGTGTGCATTCA CGGCGCGGAGATGGGCCGCGCCGCGCTCGACCTCACCCTTTTCCGGACGCGCTGGCTTCACCACGACCTCGGCTTGAACG TCGTTCTGCCGGTACTGCCGATGCACGGTCCTCGTGCGCGCGGCCTGCCGAAGGGGGCCGTGTTCCCCGGCGAGGACGTC CTCGACGACGTGCACGCCGCGGCCCAGGCGGTCTGGGATGTCCGACGGCTGTTGTCGTGGATCCGTAGCCAGGACCCCGA CGCGCCGATCGGCCTCAACAGCATCTCGCTCGGCGGCTACGTCGCATCGCTGGTCGCAAGCCTGGAGGACGGCCTGACCT GCGCCGTGCTCGGTGTCCCCGTCGCCGACCTCGTCGAGCTTCTGGGCCGTCACGCCGGACTCGGACGCGATGACCCGCGC CGGGCCACCATCAAACTGGCCGAACCGCTCGGTCGGATGACCTCGCCACTCAGCCTGAACCCCCGCGTGCCGATGCAAGG GCGGTTCATCTACGCCGGGCTGGCCGACCAGCTGGTCCATCCAAGGGAACAGGTGGTGCGCCTATGGGAGCACTGGGGTC GGCCCGAGATCGTCTGGTACCGCGGCGGCCACACCGGGTTCTTCCAGGCGCGGCCCGTGCAGCGGTTCGTCGAGGCCGCC CTCGTCCAGTCGGGCCTCGTGGACGGAGCTGCACGGTCTCGGGAGAGGTGA
Upstream 100 bases:
>100_bases AGTACACAATACCCAGAGTCGATTGCATGGGACGTTCGAAACCCGCCGGACCAGACCAACGGCCCTATCAGCCAGGTGGG CACAGCCCTAGCGTGAAAGC
Downstream 100 bases:
>100_bases CATGGACCTTCTGGATCCGCTCGACGCGGCGATGATGACCGGAGAGGTGATCGCCAGCCCCCTGCACGTCTCCGCGGTGC TGATCCTGGAACCGCCCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MAAPEHHDTDNTQPPPPVRPTPPGGGLGSVLGPLERTGRFYAESWRDYLDRSDRTVPVARPTLSLASHALRDEIVLLGLR ARRPLSDPGTFSRITREVEAAVDFYGERGWLDDPTRFFAPPPPLTDISIQRVKSARHTHQRLVFDSGYAPHPGEPGAERW QTYTANRRCYGLMLRHREPRPWLVCIHGAEMGRAALDLTLFRTRWLHHDLGLNVVLPVLPMHGPRARGLPKGAVFPGEDV LDDVHAAAQAVWDVRRLLSWIRSQDPDAPIGLNSISLGGYVASLVASLEDGLTCAVLGVPVADLVELLGRHAGLGRDDPR RATIKLAEPLGRMTSPLSLNPRVPMQGRFIYAGLADQLVHPREQVVRLWEHWGRPEIVWYRGGHTGFFQARPVQRFVEAA LVQSGLVDGAARSRER
Sequences:
>Translated_416_residues MAAPEHHDTDNTQPPPPVRPTPPGGGLGSVLGPLERTGRFYAESWRDYLDRSDRTVPVARPTLSLASHALRDEIVLLGLR ARRPLSDPGTFSRITREVEAAVDFYGERGWLDDPTRFFAPPPPLTDISIQRVKSARHTHQRLVFDSGYAPHPGEPGAERW QTYTANRRCYGLMLRHREPRPWLVCIHGAEMGRAALDLTLFRTRWLHHDLGLNVVLPVLPMHGPRARGLPKGAVFPGEDV LDDVHAAAQAVWDVRRLLSWIRSQDPDAPIGLNSISLGGYVASLVASLEDGLTCAVLGVPVADLVELLGRHAGLGRDDPR RATIKLAEPLGRMTSPLSLNPRVPMQGRFIYAGLADQLVHPREQVVRLWEHWGRPEIVWYRGGHTGFFQARPVQRFVEAA LVQSGLVDGAARSRER >Mature_415_residues AAPEHHDTDNTQPPPPVRPTPPGGGLGSVLGPLERTGRFYAESWRDYLDRSDRTVPVARPTLSLASHALRDEIVLLGLRA RRPLSDPGTFSRITREVEAAVDFYGERGWLDDPTRFFAPPPPLTDISIQRVKSARHTHQRLVFDSGYAPHPGEPGAERWQ TYTANRRCYGLMLRHREPRPWLVCIHGAEMGRAALDLTLFRTRWLHHDLGLNVVLPVLPMHGPRARGLPKGAVFPGEDVL DDVHAAAQAVWDVRRLLSWIRSQDPDAPIGLNSISLGGYVASLVASLEDGLTCAVLGVPVADLVELLGRHAGLGRDDPRR ATIKLAEPLGRMTSPLSLNPRVPMQGRFIYAGLADQLVHPREQVVRLWEHWGRPEIVWYRGGHTGFFQARPVQRFVEAAL VQSGLVDGAARSRER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019149 [H]
Pfam domain/function: PF09752 DUF2048 [H]
EC number: NA
Molecular weight: Translated: 46237; Mature: 46106
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPEHHDTDNTQPPPPVRPTPPGGGLGSVLGPLERTGRFYAESWRDYLDRSDRTVPVAR CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC PTLSLASHALRDEIVLLGLRARRPLSDPGTFSRITREVEAAVDFYGERGWLDDPTRFFAP HHHHHHHHHHHHHHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC PPPLTDISIQRVKSARHTHQRLVFDSGYAPHPGEPGAERWQTYTANRRCYGLMLRHREPR CCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHCCCCC PWLVCIHGAEMGRAALDLTLFRTRWLHHDLGLNVVLPVLPMHGPRARGLPKGAVFPGEDV CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCCCCCCCHHH LDDVHAAAQAVWDVRRLLSWIRSQDPDAPIGLNSISLGGYVASLVASLEDGLTCAVLGVP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC VADLVELLGRHAGLGRDDPRRATIKLAEPLGRMTSPLSLNPRVPMQGRFIYAGLADQLVH HHHHHHHHHHHCCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHCC PREQVVRLWEHWGRPEIVWYRGGHTGFFQARPVQRFVEAALVQSGLVDGAARSRER CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure AAPEHHDTDNTQPPPPVRPTPPGGGLGSVLGPLERTGRFYAESWRDYLDRSDRTVPVAR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCC PTLSLASHALRDEIVLLGLRARRPLSDPGTFSRITREVEAAVDFYGERGWLDDPTRFFAP HHHHHHHHHHHHHHEEEEHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCC PPPLTDISIQRVKSARHTHQRLVFDSGYAPHPGEPGAERWQTYTANRRCYGLMLRHREPR CCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHCCCCC PWLVCIHGAEMGRAALDLTLFRTRWLHHDLGLNVVLPVLPMHGPRARGLPKGAVFPGEDV CEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEHHCCCCCCCCCCCCCCCCCCCHHH LDDVHAAAQAVWDVRRLLSWIRSQDPDAPIGLNSISLGGYVASLVASLEDGLTCAVLGVP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC VADLVELLGRHAGLGRDDPRRATIKLAEPLGRMTSPLSLNPRVPMQGRFIYAGLADQLVH HHHHHHHHHHHCCCCCCCCCHHHEEHHHHHHHHCCCCCCCCCCCCCCCEEEECHHHHHCC PREQVVRLWEHWGRPEIVWYRGGHTGFFQARPVQRFVEAALVQSGLVDGAARSRER CHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]