| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119870102
Identifier: 119870102
GI number: 119870102
Start: 4297555
End: 4299153
Strand: Direct
Name: 119870102
Synonym: Mkms_4072
Alternate gene names: NA
Gene position: 4297555-4299153 (Clockwise)
Preceding gene: 119870101
Following gene: 119870103
Centisome position: 74.91
GC content: 71.17
Gene sequence:
>1599_bases ATGACCACCACCGCGGCGCCACCCCGGACCGCCTCCCCGTATACCGGTGTGCCCCAGCTGATCCGGCTTGCGCTGCGCCG CGACCGCGTCCGGCTCAGTGTGTGGATCTCGGTACTGACACTGATGATGGTGTACGCCCCGAACGCGGTGAAACTCGCCT ACCCCGACGAACCGCAGCGGCTGGCCCGGGTGAACCTCATGAAGACACCCGCGGCAATCATCATGGGCGGCCCCATGTTC GGCGTCCGGGAGACCGAACTGGGTGCGATGATGGCCAACGAGCTGATGCTCACCCTGATCGTGGCCGCTTCGATCCTGTC GATCCTCACGGTCATCCGGCACACCCGGGCCGAAGAGGAAAGCGGCGCAGCGGAATTGGTGCTGTCCTCCGTGGTGGGCC GGTACGCTCGCACCACCGCGGCACTCATCCTGGTCGGCGCCGTCAACGCCGTGCTGACCGTCACCATGACGCTGGCGATG TCGGCGGCCGGGTTCCGGTTCGTCGACACCCTCGCGATGTGCCTCGGCGTCACCGCGGTGTCGGCGCTCTTCGGCGCGGT CGCCGCGGTCACCGCGCAGCTGTGGCGGCAGGCCCGCACGGCGACCGGCGCGGCGATGGCGGTGTTGGCGCTGGCCGCAC TGGTCCGCGGCATCGGTGATGTCATCGACAATTCGGGCAGTGCGCTGAGCTGGTTCTCACCGATCGCCTGGGCGCAGCAG ATGCGGGCGTTCGTCGCGTTGCGCTGGTGGCCGCTCGTCCTGCTCGTCGCCGTCACGGTCGCGCTCGTCGCGCTCGCCGC CTACCTGGAGAACCGCCGTCAGTACGACGACGGCACGCTCCCCAGCACCGGGGACCGGCCGGACGCCCCGGCGATCCGCG GCGTCCTCGGCCTGCACCTAACGCTGCAGCGCGGCCTCACCGTCGGCTGGGGGGTGGGCCTGTTCCTCGGCGGACTGGCC TTCGGATCGATGACGAAATCGCTGATCGACGCGGCGGAGACCAACGAACTGCTGGCCCGGGTGCTCGCCGTACAGGGCAA CGACGGCGTCTACACCACGATGACGCAGTTCCTCGCGGCCGCGGCGTGCGCCTACGTGGTCAGCGCGGTGCTGCGGGTGT ACGCCGACGAACTGTCCGGCACCGGCGAAGCGGTGCTGGCCGGTGCCGTGTCCCGGTGGCGCTGGCTGCTCAGCGCGGTG GCCGCCGCGATGCTGGGGGCCACGCTGCTGATGGTGGGCGCCGGGCTCGGAAACGGACTGGGCGCCGGACTGACGCTGGG CGAACCCGCCACCATCGTCAAGCTCACCGTTGCCGGACTGGCGTTCGTGCCCGCGCTCGCCGTGGTCGCCGGTGTCGCCG CCCTCGCGGTCGCCGTGCGCCGGCCGTGGGTGGCGTGGGCGGCGGTGACGTTCATCGTCGTCTCGCTGTATCTCGGCGCG CTGCTGCGGCTGCCGCAGTGGCTGCTCGACGCCTCACCGGTCGGGCAGACGACGGCGCCCACCGACTATCCGGTGTCCGC GCTGGTGGTGATGTGCGTCGTCGCGGCGGCGTTCACCGCGGTGGCCGGATCGCTGTACCGCGGCCGGGACGCAGTGTGA
Upstream 100 bases:
>100_bases CGGCGATGGCGCGGTTGACCGAACTCGGGATCACCGAACTCACCGTCACCCCGGCATCGCTGGAGGACATGTTCCTGCGC GAGTACTCCGGAGCCGGGCG
Downstream 100 bases:
>100_bases ACCATGAAGATCTTGGCGCAGACGGCCGTCTCCGGAGTCGTCGGGCTCGTGTTCTTCGGTGTGCTGTTGTTCGGGCCGGC CGGAACCTTCGACTATTGGC
Product: putative ABC transporter membrane-spanning protein
Products: NA
Alternate protein names: Exporter Of Polyketide Antibiotics-Like Protein; Exporter Of Polyketide Antibiotics; Anibiotic ABC Transporter Efflux Pump; ABC Transporter Membrane Protein; ABC Transporter; Exporter Of Polyketide Antibiotics- Like Protein; ABC Transporter Permease Protein; ABC Antibiotics Transporter; Abc Transporter Integral Membrane Subunit; ABC-2 Type Transport System Permease Protein; Tetronasin Resistance Transmembrane Protein; ABC Transporter Transmembrane Subunit; ABC Transporter Polyketide Tetronasin Permease; Tetronasin-Transport Membrane Protein ABC Transporter; TnrB3 Protein; ABC Transporter Permease
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MTTTAAPPRTASPYTGVPQLIRLALRRDRVRLSVWISVLTLMMVYAPNAVKLAYPDEPQRLARVNLMKTPAAIIMGGPMF GVRETELGAMMANELMLTLIVAASILSILTVIRHTRAEEESGAAELVLSSVVGRYARTTAALILVGAVNAVLTVTMTLAM SAAGFRFVDTLAMCLGVTAVSALFGAVAAVTAQLWRQARTATGAAMAVLALAALVRGIGDVIDNSGSALSWFSPIAWAQQ MRAFVALRWWPLVLLVAVTVALVALAAYLENRRQYDDGTLPSTGDRPDAPAIRGVLGLHLTLQRGLTVGWGVGLFLGGLA FGSMTKSLIDAAETNELLARVLAVQGNDGVYTTMTQFLAAAACAYVVSAVLRVYADELSGTGEAVLAGAVSRWRWLLSAV AAAMLGATLLMVGAGLGNGLGAGLTLGEPATIVKLTVAGLAFVPALAVVAGVAALAVAVRRPWVAWAAVTFIVVSLYLGA LLRLPQWLLDASPVGQTTAPTDYPVSALVVMCVVAAAFTAVAGSLYRGRDAV
Sequences:
>Translated_532_residues MTTTAAPPRTASPYTGVPQLIRLALRRDRVRLSVWISVLTLMMVYAPNAVKLAYPDEPQRLARVNLMKTPAAIIMGGPMF GVRETELGAMMANELMLTLIVAASILSILTVIRHTRAEEESGAAELVLSSVVGRYARTTAALILVGAVNAVLTVTMTLAM SAAGFRFVDTLAMCLGVTAVSALFGAVAAVTAQLWRQARTATGAAMAVLALAALVRGIGDVIDNSGSALSWFSPIAWAQQ MRAFVALRWWPLVLLVAVTVALVALAAYLENRRQYDDGTLPSTGDRPDAPAIRGVLGLHLTLQRGLTVGWGVGLFLGGLA FGSMTKSLIDAAETNELLARVLAVQGNDGVYTTMTQFLAAAACAYVVSAVLRVYADELSGTGEAVLAGAVSRWRWLLSAV AAAMLGATLLMVGAGLGNGLGAGLTLGEPATIVKLTVAGLAFVPALAVVAGVAALAVAVRRPWVAWAAVTFIVVSLYLGA LLRLPQWLLDASPVGQTTAPTDYPVSALVVMCVVAAAFTAVAGSLYRGRDAV >Mature_531_residues TTTAAPPRTASPYTGVPQLIRLALRRDRVRLSVWISVLTLMMVYAPNAVKLAYPDEPQRLARVNLMKTPAAIIMGGPMFG VRETELGAMMANELMLTLIVAASILSILTVIRHTRAEEESGAAELVLSSVVGRYARTTAALILVGAVNAVLTVTMTLAMS AAGFRFVDTLAMCLGVTAVSALFGAVAAVTAQLWRQARTATGAAMAVLALAALVRGIGDVIDNSGSALSWFSPIAWAQQM RAFVALRWWPLVLLVAVTVALVALAAYLENRRQYDDGTLPSTGDRPDAPAIRGVLGLHLTLQRGLTVGWGVGLFLGGLAF GSMTKSLIDAAETNELLARVLAVQGNDGVYTTMTQFLAAAACAYVVSAVLRVYADELSGTGEAVLAGAVSRWRWLLSAVA AAMLGATLLMVGAGLGNGLGAGLTLGEPATIVKLTVAGLAFVPALAVVAGVAALAVAVRRPWVAWAAVTFIVVSLYLGAL LRLPQWLLDASPVGQTTAPTDYPVSALVVMCVVAAAFTAVAGSLYRGRDAV
Specific function: Unknown
COG id: COG3559
COG function: function code M; Putative exporter of polyketide antibiotics
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55384; Mature: 55253
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTAAPPRTASPYTGVPQLIRLALRRDRVRLSVWISVLTLMMVYAPNAVKLAYPDEPQR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH LARVNLMKTPAAIIMGGPMFGVRETELGAMMANELMLTLIVAASILSILTVIRHTRAEEE HHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGAAELVLSSVVGRYARTTAALILVGAVNAVLTVTMTLAMSAAGFRFVDTLAMCLGVTAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SALFGAVAAVTAQLWRQARTATGAAMAVLALAALVRGIGDVIDNSGSALSWFSPIAWAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MRAFVALRWWPLVLLVAVTVALVALAAYLENRRQYDDGTLPSTGDRPDAPAIRGVLGLHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH TLQRGLTVGWGVGLFLGGLAFGSMTKSLIDAAETNELLARVLAVQGNDGVYTTMTQFLAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AACAYVVSAVLRVYADELSGTGEAVLAGAVSRWRWLLSAVAAAMLGATLLMVGAGLGNGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAGLTLGEPATIVKLTVAGLAFVPALAVVAGVAALAVAVRRPWVAWAAVTFIVVSLYLGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLRLPQWLLDASPVGQTTAPTDYPVSALVVMCVVAAAFTAVAGSLYRGRDAV HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TTTAAPPRTASPYTGVPQLIRLALRRDRVRLSVWISVLTLMMVYAPNAVKLAYPDEPQR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHH LARVNLMKTPAAIIMGGPMFGVRETELGAMMANELMLTLIVAASILSILTVIRHTRAEEE HHHHHHHCCCHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGAAELVLSSVVGRYARTTAALILVGAVNAVLTVTMTLAMSAAGFRFVDTLAMCLGVTAV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH SALFGAVAAVTAQLWRQARTATGAAMAVLALAALVRGIGDVIDNSGSALSWFSPIAWAQQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH MRAFVALRWWPLVLLVAVTVALVALAAYLENRRQYDDGTLPSTGDRPDAPAIRGVLGLHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH TLQRGLTVGWGVGLFLGGLAFGSMTKSLIDAAETNELLARVLAVQGNDGVYTTMTQFLAA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH AACAYVVSAVLRVYADELSGTGEAVLAGAVSRWRWLLSAVAAAMLGATLLMVGAGLGNGL HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GAGLTLGEPATIVKLTVAGLAFVPALAVVAGVAALAVAVRRPWVAWAAVTFIVVSLYLGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH LLRLPQWLLDASPVGQTTAPTDYPVSALVVMCVVAAAFTAVAGSLYRGRDAV HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA