| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yhaQ [H]
Identifier: 119870101
GI number: 119870101
Start: 4296617
End: 4297558
Strand: Direct
Name: yhaQ [H]
Synonym: Mkms_4071
Alternate gene names: 119870101
Gene position: 4296617-4297558 (Clockwise)
Preceding gene: 119870100
Following gene: 119870102
Centisome position: 74.89
GC content: 69.96
Gene sequence:
>942_bases ATGACGGTTCAGACGAGCAGGTCCCCGCGACGGCCTGAGGGCACGACACCCCCGGCCGTCGAAATCCGGGGACTGGTCAA GACATTCGGCCGCACCCGGGCGCTCGACGGTCTCGACATGAGCGTCTCCCCCGGTGACATCGCCGGGTTCCTCGGCCCCA ACGGCTCGGGTAAGTCCACCACGATCCGCGTACTGCTCGGGCTGCTGCGCGCCGACGCCGGTACGGTCCGGCTGCTCGGC GGCGATCCGTGGCGCGACGCGGTCGACCTGCACCGCCGCATCGCCTACGTCCCCGGCGACGTCACGCTGTGGCCGAACCT CACCGGCCTGCAGGCGATCGACTTCCTCGCCCGGCTGCGCGGACCCGATGCGCTCGACATCCGCCGCCGCGACGAGCTCA TCGAGCGCTTCGAACTCGACCCGCACAAGAAGGCCCGTACCTACTCCAAGGGCAACCGGCAGAAGGTGGCGCTGGTCGCC GCGTTCAGCACCGGCGCCGACCTCTACATCCTCGACGAACCGACGTCCGGGTTGGACCCGTTGATGGAGAAGGCTTTTCA GCACTGCGTCCAGGAAGTGGCGGGCGACGGCGCGGCGGTGCTGCTGTCCAGCCACATCCTCGCCGAGGTCGAGAAGCTAT GCGACACCGTGACGATCATCCGGGCCGGCCGCACCGTGCGTTCGGGACCGCTCGACGAACTGCGGCACCTGATGCGCACG ACGGTCAACGTGCGGACCCGCGACGACGCCGCCGCCCTGCGCGACGCCCCGTTCGTCCACGAGTTCACGGCGGTCGACGG CGGCGCGCGGTTCGCCGTGGACCGGGCCGATCTCGACGCGGCGATGGCGCGGTTGACCGAACTCGGGATCACCGAACTCA CCGTCACCCCGGCATCGCTGGAGGACATGTTCCTGCGCGAGTACTCCGGAGCCGGGCGATGA
Upstream 100 bases:
>100_bases GCCCTCGAGATCTACACCAACGGGCTGATGGCCGATTCGACGATGTACGACGCCTTCCTGGCAAACCAGGGCGCCTCATC CACACACCAAGGAGACGGTG
Downstream 100 bases:
>100_bases CCACCACCGCGGCGCCACCCCGGACCGCCTCCCCGTATACCGGTGTGCCCCAGCTGATCCGGCTTGCGCTGCGCCGCGAC CGCGTCCGGCTCAGTGTGTG
Product: ABC transporter-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTVQTSRSPRRPEGTTPPAVEIRGLVKTFGRTRALDGLDMSVSPGDIAGFLGPNGSGKSTTIRVLLGLLRADAGTVRLLG GDPWRDAVDLHRRIAYVPGDVTLWPNLTGLQAIDFLARLRGPDALDIRRRDELIERFELDPHKKARTYSKGNRQKVALVA AFSTGADLYILDEPTSGLDPLMEKAFQHCVQEVAGDGAAVLLSSHILAEVEKLCDTVTIIRAGRTVRSGPLDELRHLMRT TVNVRTRDDAAALRDAPFVHEFTAVDGGARFAVDRADLDAAMARLTELGITELTVTPASLEDMFLREYSGAGR
Sequences:
>Translated_313_residues MTVQTSRSPRRPEGTTPPAVEIRGLVKTFGRTRALDGLDMSVSPGDIAGFLGPNGSGKSTTIRVLLGLLRADAGTVRLLG GDPWRDAVDLHRRIAYVPGDVTLWPNLTGLQAIDFLARLRGPDALDIRRRDELIERFELDPHKKARTYSKGNRQKVALVA AFSTGADLYILDEPTSGLDPLMEKAFQHCVQEVAGDGAAVLLSSHILAEVEKLCDTVTIIRAGRTVRSGPLDELRHLMRT TVNVRTRDDAAALRDAPFVHEFTAVDGGARFAVDRADLDAAMARLTELGITELTVTPASLEDMFLREYSGAGR >Mature_312_residues TVQTSRSPRRPEGTTPPAVEIRGLVKTFGRTRALDGLDMSVSPGDIAGFLGPNGSGKSTTIRVLLGLLRADAGTVRLLGG DPWRDAVDLHRRIAYVPGDVTLWPNLTGLQAIDFLARLRGPDALDIRRRDELIERFELDPHKKARTYSKGNRQKVALVAA FSTGADLYILDEPTSGLDPLMEKAFQHCVQEVAGDGAAVLLSSHILAEVEKLCDTVTIIRAGRTVRSGPLDELRHLMRTT VNVRTRDDAAALRDAPFVHEFTAVDGGARFAVDRADLDAAMARLTELGITELTVTPASLEDMFLREYSGAGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI150417984, Length=305, Percent_Identity=30.8196721311475, Blast_Score=112, Evalue=6e-25, Organism=Homo sapiens, GI21536376, Length=222, Percent_Identity=31.5315315315315, Blast_Score=109, Evalue=3e-24, Organism=Homo sapiens, GI45446740, Length=310, Percent_Identity=26.4516129032258, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI47078218, Length=310, Percent_Identity=26.4516129032258, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI27436953, Length=209, Percent_Identity=31.1004784688995, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI105990541, Length=205, Percent_Identity=31.7073170731707, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI6005701, Length=211, Percent_Identity=30.8056872037915, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI116734710, Length=295, Percent_Identity=28.135593220339, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI27477115, Length=214, Percent_Identity=30.3738317757009, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI31657092, Length=204, Percent_Identity=31.8627450980392, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI27881501, Length=211, Percent_Identity=28.9099526066351, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI30795238, Length=211, Percent_Identity=28.9099526066351, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI153792144, Length=257, Percent_Identity=27.2373540856031, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI27262624, Length=211, Percent_Identity=29.3838862559242, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI27262626, Length=211, Percent_Identity=29.3838862559242, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI157502201, Length=210, Percent_Identity=25.7142857142857, Blast_Score=65, Evalue=6e-11, Organism=Escherichia coli, GI48994943, Length=230, Percent_Identity=34.7826086956522, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI87081782, Length=222, Percent_Identity=31.981981981982, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786319, Length=309, Percent_Identity=28.1553398058252, Blast_Score=112, Evalue=2e-26, Organism=Escherichia coli, GI48995001, Length=214, Percent_Identity=32.7102803738318, Blast_Score=98, Evalue=6e-22, Organism=Escherichia coli, GI1787792, Length=222, Percent_Identity=28.8288288288288, Blast_Score=95, Evalue=5e-21, Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=28.110599078341, Blast_Score=94, Evalue=8e-21, Organism=Escherichia coli, GI1789593, Length=222, Percent_Identity=26.5765765765766, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=27.4336283185841, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1787759, Length=263, Percent_Identity=30.4182509505703, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790190, Length=249, Percent_Identity=26.9076305220884, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1790525, Length=260, Percent_Identity=25, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1788761, Length=228, Percent_Identity=27.6315789473684, Blast_Score=85, Evalue=5e-18, Organism=Escherichia coli, GI1789991, Length=221, Percent_Identity=28.0542986425339, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788450, Length=217, Percent_Identity=26.7281105990783, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87081791, Length=238, Percent_Identity=28.5714285714286, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1787370, Length=230, Percent_Identity=26.0869565217391, Blast_Score=83, Evalue=3e-17, Organism=Escherichia coli, GI1788506, Length=211, Percent_Identity=30.8056872037915, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1787089, Length=222, Percent_Identity=27.4774774774775, Blast_Score=81, Evalue=8e-17, Organism=Escherichia coli, GI1787712, Length=213, Percent_Identity=25.8215962441315, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789672, Length=224, Percent_Identity=27.2321428571429, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1790467, Length=223, Percent_Identity=25.5605381165919, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI87081709, Length=230, Percent_Identity=26.5217391304348, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788210, Length=224, Percent_Identity=26.7857142857143, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1786872, Length=223, Percent_Identity=27.3542600896861, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789032, Length=236, Percent_Identity=27.5423728813559, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI2367384, Length=183, Percent_Identity=28.9617486338798, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=28.9099526066351, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1788165, Length=211, Percent_Identity=30.8056872037915, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1786398, Length=227, Percent_Identity=25.1101321585903, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87082268, Length=221, Percent_Identity=26.2443438914027, Blast_Score=68, Evalue=8e-13, Organism=Escherichia coli, GI1790162, Length=244, Percent_Identity=21.7213114754098, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786703, Length=174, Percent_Identity=31.6091954022989, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1787105, Length=231, Percent_Identity=25.5411255411255, Blast_Score=66, Evalue=3e-12, Organism=Escherichia coli, GI1786653, Length=260, Percent_Identity=25.7692307692308, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789751, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789873, Length=186, Percent_Identity=27.4193548387097, Blast_Score=61, Evalue=8e-11, Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=26.3888888888889, Blast_Score=61, Evalue=8e-11, Organism=Caenorhabditis elegans, GI71983523, Length=226, Percent_Identity=32.7433628318584, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983516, Length=226, Percent_Identity=32.7433628318584, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI71983510, Length=226, Percent_Identity=32.7433628318584, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI115533608, Length=215, Percent_Identity=30.2325581395349, Blast_Score=101, Evalue=5e-22, Organism=Caenorhabditis elegans, GI17565586, Length=206, Percent_Identity=29.6116504854369, Blast_Score=95, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17510237, Length=222, Percent_Identity=29.2792792792793, Blast_Score=95, Evalue=6e-20, Organism=Caenorhabditis elegans, GI17539902, Length=220, Percent_Identity=24.5454545454545, Blast_Score=67, Evalue=8e-12, Organism=Caenorhabditis elegans, GI17558664, Length=210, Percent_Identity=27.6190476190476, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17533971, Length=219, Percent_Identity=27.3972602739726, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI28574150, Length=240, Percent_Identity=28.75, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI116007328, Length=240, Percent_Identity=28.75, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI24666092, Length=306, Percent_Identity=26.797385620915, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI221500365, Length=300, Percent_Identity=28, Blast_Score=108, Evalue=6e-24, Organism=Drosophila melanogaster, GI116007184, Length=300, Percent_Identity=28, Blast_Score=107, Evalue=8e-24, Organism=Drosophila melanogaster, GI28573573, Length=234, Percent_Identity=29.9145299145299, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI28573571, Length=234, Percent_Identity=29.9145299145299, Blast_Score=105, Evalue=4e-23, Organism=Drosophila melanogaster, GI281362751, Length=217, Percent_Identity=28.5714285714286, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24650853, Length=218, Percent_Identity=28.4403669724771, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24650855, Length=218, Percent_Identity=28.4403669724771, Blast_Score=100, Evalue=1e-21, Organism=Drosophila melanogaster, GI24643674, Length=237, Percent_Identity=27.8481012658228, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24648314, Length=226, Percent_Identity=28.3185840707965, Blast_Score=95, Evalue=8e-20, Organism=Drosophila melanogaster, GI24582014, Length=213, Percent_Identity=29.1079812206573, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24582012, Length=213, Percent_Identity=29.1079812206573, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI85725262, Length=226, Percent_Identity=28.3185840707965, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI221512771, Length=223, Percent_Identity=26.9058295964126, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI17136592, Length=208, Percent_Identity=28.8461538461538, Blast_Score=75, Evalue=8e-14, Organism=Drosophila melanogaster, GI24581407, Length=228, Percent_Identity=27.1929824561404, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI45552199, Length=222, Percent_Identity=27.4774774774775, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI45552337, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552339, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552355, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552351, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552345, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552347, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552341, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552335, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24583969, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552363, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552361, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552357, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552359, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552353, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45550972, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552349, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI45552343, Length=232, Percent_Identity=26.2931034482759, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24581409, Length=219, Percent_Identity=26.9406392694064, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 34034; Mature: 33903
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQTSRSPRRPEGTTPPAVEIRGLVKTFGRTRALDGLDMSVSPGDIAGFLGPNGSGKST CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH TIRVLLGLLRADAGTVRLLGGDPWRDAVDLHRRIAYVPGDVTLWPNLTGLQAIDFLARLR HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHC GPDALDIRRRDELIERFELDPHKKARTYSKGNRQKVALVAAFSTGADLYILDEPTSGLDP CCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCH LMEKAFQHCVQEVAGDGAAVLLSSHILAEVEKLCDTVTIIRAGRTVRSGPLDELRHLMRT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVNVRTRDDAAALRDAPFVHEFTAVDGGARFAVDRADLDAAMARLTELGITELTVTPASL HCCCEECCHHHHHHCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCHH EDMFLREYSGAGR HHHHHHHHCCCCC >Mature Secondary Structure TVQTSRSPRRPEGTTPPAVEIRGLVKTFGRTRALDGLDMSVSPGDIAGFLGPNGSGKST CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHH TIRVLLGLLRADAGTVRLLGGDPWRDAVDLHRRIAYVPGDVTLWPNLTGLQAIDFLARLR HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHEECCCCEEECCCCCHHHHHHHHHHHC GPDALDIRRRDELIERFELDPHKKARTYSKGNRQKVALVAAFSTGADLYILDEPTSGLDP CCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCH LMEKAFQHCVQEVAGDGAAVLLSSHILAEVEKLCDTVTIIRAGRTVRSGPLDELRHLMRT HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH TVNVRTRDDAAALRDAPFVHEFTAVDGGARFAVDRADLDAAMARLTELGITELTVTPASL HCCCEECCHHHHHHCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCHH EDMFLREYSGAGR HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]