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The map label for this gene is ydfH [H]

Identifier: 119870012

GI number: 119870012

Start: 4197167

End: 4198474

Strand: Direct

Name: ydfH [H]

Synonym: Mkms_3982

Alternate gene names: 119870012

Gene position: 4197167-4198474 (Clockwise)

Preceding gene: 119870009

Following gene: 119870013

Centisome position: 73.16

GC content: 69.8

Gene sequence:

>1308_bases
ATGGTCGCAGTCACCGCCAGCCCCCCGCCCGCGTCCGTCGCGGTCAATGACACCACGTCACCACCCCGCACCGTCGGCAT
CGTGCCGACGGCCTCCATGGTGATCGGCGCCGCCATCGGCGTGGTGTGGTTCTGGATCCCGTTGGGCCTGCTGGTACTCG
GCACCTCCTCGATCCCGTCGGTCATCGGATTCATCTTGGCGGCAGTCGTTTTCATCTACCTGGTCCGCGGGATCGACTGG
GTCGAGCGCGTCCGCAGCGAAGCGGTGTTCGGGATGCGGATCGGGCGCCCGTTCCGGCGGATGACCGAGTACACCGGATT
CCAGGGTTGGCTGCACCAGCTGTGGCTGGACGTCAGCAGCGCCCGGTTCTGGAAGACATTCGCCCACCACTACCTGCGGA
TGATCTACGACATCCTGGCCACCGCGCTGGCGTTGGCGCTCCTGGCGTTCGGGTTCCTGGCGCCGGCCGCCGCCCTCGCG
ATCGACCACAGCGACGATGCGGCGGGTCTGGCGTTCCTCCCGCCGGCACTCGCGTGGCCGCTGGCCGTGGTGGCGGTGGC
CGCGTCGGTCGCGATCCTGATCTTCGCGCCCGCACTCGACGCGATCATCGACCGCTGGCTGCTCACCCCGTCTCCCACCG
CGACGCTGAAGTATCAGGTCAGCGCGCTCAGCGACGCCCGGGCGGGCGCGGTGTCGTCGGCCCAGACCGAACGTCACCGC
ATCGAGCGGGATCTGCACGACAGCGTCCAGCCGCGGCTGGTGTCGCTGGCCATGGCGATCGGCCTGGCGCAGACGAAACT
CGACAGCGATCTGCCCGCGGCCAAACAGCTGATCGCCGAGGCGCACGACGAGGCGAAGAACGCTCTGGTCGAACTGCGCA
ACGTGGTGCGGGGTATCGCGCCGACGATCCTGGCCGACCGCGGGCTCGACGCGGCGTTGTCCGCCGTCGTGCAGCGGGCA
GACAACTCGGGGGTGCCCACGACGTTGAACCTGCACCTGCCGCGGCGCCTGCCCGAGGAGACCGAATCCGTCGCCTATTT
CGTTGTCGCCGAGGCCCTCACGAACGTCGCCAAACACGCCGGGGCCAGCCAGGCCGTGGTCACCGTCCGGTACGACGAGC
CGTCGAACTCGCTGTACGTCTCCGTCTTCGACGACGGCCGCGGCGGTGCGGCGATCGCCGACGACGACAACGCCACCGGC
CTGCGGGGGCTCGACGAACGGGTGCGCGCAGCGCGCGGCACGTTCACCGTGTCCAGCCCGACGACCGGGCCCACCATCGT
CACCGCGGTGCTGCCATGCGCATCGTGA

Upstream 100 bases:

>100_bases
CGATTCGCACCCCGCGATTCTGGCATCCGGGGGTTAACCCCCGGCGAGCTCGGCGGAAAACGCTGTGTCGCAGCGGACGC
GCACTCCATAGGTTGGACAC

Downstream 100 bases:

>100_bases
TCGCTGAGGACTCCGCGCTGCTGCGCGCCGGAATCGAGCGCATCCTCGCCGACGCCGGCCACGAGGTGGTCGCCGGAGTT
CCCGACGCCACCAACCTGTT

Product: integral membrane sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MVAVTASPPPASVAVNDTTSPPRTVGIVPTASMVIGAAIGVVWFWIPLGLLVLGTSSIPSVIGFILAAVVFIYLVRGIDW
VERVRSEAVFGMRIGRPFRRMTEYTGFQGWLHQLWLDVSSARFWKTFAHHYLRMIYDILATALALALLAFGFLAPAAALA
IDHSDDAAGLAFLPPALAWPLAVVAVAASVAILIFAPALDAIIDRWLLTPSPTATLKYQVSALSDARAGAVSSAQTERHR
IERDLHDSVQPRLVSLAMAIGLAQTKLDSDLPAAKQLIAEAHDEAKNALVELRNVVRGIAPTILADRGLDAALSAVVQRA
DNSGVPTTLNLHLPRRLPEETESVAYFVVAEALTNVAKHAGASQAVVTVRYDEPSNSLYVSVFDDGRGGAAIADDDNATG
LRGLDERVRAARGTFTVSSPTTGPTIVTAVLPCAS

Sequences:

>Translated_435_residues
MVAVTASPPPASVAVNDTTSPPRTVGIVPTASMVIGAAIGVVWFWIPLGLLVLGTSSIPSVIGFILAAVVFIYLVRGIDW
VERVRSEAVFGMRIGRPFRRMTEYTGFQGWLHQLWLDVSSARFWKTFAHHYLRMIYDILATALALALLAFGFLAPAAALA
IDHSDDAAGLAFLPPALAWPLAVVAVAASVAILIFAPALDAIIDRWLLTPSPTATLKYQVSALSDARAGAVSSAQTERHR
IERDLHDSVQPRLVSLAMAIGLAQTKLDSDLPAAKQLIAEAHDEAKNALVELRNVVRGIAPTILADRGLDAALSAVVQRA
DNSGVPTTLNLHLPRRLPEETESVAYFVVAEALTNVAKHAGASQAVVTVRYDEPSNSLYVSVFDDGRGGAAIADDDNATG
LRGLDERVRAARGTFTVSSPTTGPTIVTAVLPCAS
>Mature_435_residues
MVAVTASPPPASVAVNDTTSPPRTVGIVPTASMVIGAAIGVVWFWIPLGLLVLGTSSIPSVIGFILAAVVFIYLVRGIDW
VERVRSEAVFGMRIGRPFRRMTEYTGFQGWLHQLWLDVSSARFWKTFAHHYLRMIYDILATALALALLAFGFLAPAAALA
IDHSDDAAGLAFLPPALAWPLAVVAVAASVAILIFAPALDAIIDRWLLTPSPTATLKYQVSALSDARAGAVSSAQTERHR
IERDLHDSVQPRLVSLAMAIGLAQTKLDSDLPAAKQLIAEAHDEAKNALVELRNVVRGIAPTILADRGLDAALSAVVQRA
DNSGVPTTLNLHLPRRLPEETESVAYFVVAEALTNVAKHAGASQAVVTVRYDEPSNSLYVSVFDDGRGGAAIADDDNATG
LRGLDERVRAARGTFTVSSPTTGPTIVTAVLPCAS

Specific function: Member of the two-component regulatory system ydfH/ydfI. May activate ydfI by phosphorylation [H]

COG id: COG4564

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1787474, Length=199, Percent_Identity=29.1457286432161, Blast_Score=72, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR000014
- InterPro:   IPR011712 [H]

Pfam domain/function: PF02518 HATPase_c; PF07730 HisKA_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46146; Mature: 46146

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAVTASPPPASVAVNDTTSPPRTVGIVPTASMVIGAAIGVVWFWIPLGLLVLGTSSIPS
CEEEECCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VIGFILAAVVFIYLVRGIDWVERVRSEAVFGMRIGRPFRRMTEYTGFQGWLHQLWLDVSS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH
ARFWKTFAHHYLRMIYDILATALALALLAFGFLAPAAALAIDHSDDAAGLAFLPPALAWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHH
LAVVAVAASVAILIFAPALDAIIDRWLLTPSPTATLKYQVSALSDARAGAVSSAQTERHR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCHHCCCCHHHHHHHHH
IERDLHDSVQPRLVSLAMAIGLAQTKLDSDLPAAKQLIAEAHDEAKNALVELRNVVRGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTILADRGLDAALSAVVQRADNSGVPTTLNLHLPRRLPEETESVAYFVVAEALTNVAKHA
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GASQAVVTVRYDEPSNSLYVSVFDDGRGGAAIADDDNATGLRGLDERVRAARGTFTVSSP
CCCCEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHCCCEEECCC
TTGPTIVTAVLPCAS
CCCCHHHHHHCCCCC
>Mature Secondary Structure
MVAVTASPPPASVAVNDTTSPPRTVGIVPTASMVIGAAIGVVWFWIPLGLLVLGTSSIPS
CEEEECCCCCCEEEECCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
VIGFILAAVVFIYLVRGIDWVERVRSEAVFGMRIGRPFRRMTEYTGFQGWLHQLWLDVSS
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHH
ARFWKTFAHHYLRMIYDILATALALALLAFGFLAPAAALAIDHSDDAAGLAFLPPALAWP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHH
LAVVAVAASVAILIFAPALDAIIDRWLLTPSPTATLKYQVSALSDARAGAVSSAQTERHR
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHCCHHCCCCHHHHHHHHH
IERDLHDSVQPRLVSLAMAIGLAQTKLDSDLPAAKQLIAEAHDEAKNALVELRNVVRGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PTILADRGLDAALSAVVQRADNSGVPTTLNLHLPRRLPEETESVAYFVVAEALTNVAKHA
HHHHHCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHC
GASQAVVTVRYDEPSNSLYVSVFDDGRGGAAIADDDNATGLRGLDERVRAARGTFTVSSP
CCCCEEEEEEECCCCCCEEEEEEECCCCCEEECCCCCCCCCCCHHHHHHHHCCCEEECCC
TTGPTIVTAVLPCAS
CCCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]