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The map label for this gene is bbsG [H]

Identifier: 119869839

GI number: 119869839

Start: 4022053

End: 4023354

Strand: Direct

Name: bbsG [H]

Synonym: Mkms_3808

Alternate gene names: 119869839

Gene position: 4022053-4023354 (Clockwise)

Preceding gene: 119869838

Following gene: 119869840

Centisome position: 70.1

GC content: 66.13

Gene sequence:

>1302_bases
ATGGCGTGGGATTTCGAGACCGACCCCGAGTACCAGAAGGTCCTCGACTGGGCCGATGAGTTCGTGCGGGAGGAGGTCGA
ACCGCTCGACCTGGTCTGGCCGCACCAGCAGTTCGTACCACTCGACGGCGAACGGCGTCGCGCCATCGACCCGCTGAAGG
AGGAGGTGCGCCGCCAGGGCCTGTGGGCCACACACCTGGGACCCGACCTGGGCGGTCAGGGTTACGGCCAACTCAAACTC
GCGCTGCTCAACGAGATCCTCGGGCGTTCGCAGTGGGCGCCGATCGTGTTCGGGTGTCAGGCGCCCGACACCGGCAACGC
CGAGATCATCGCGCACTACGGCACCGACGAGCAGAAGGAGCGGTATCTGCGGCCACTGCTCGACGGTGAGTTGTTCTCCT
GCTATTCGATGACCGAACCGCACGCCGGCGCCGACCCGACGTTGTTCACCACCCGCGCGGTGCGCGACGGTGACCACTGG
GTGATCAACGGCCAGAAGTTCTTCTCGTCCAACGCCTCGACGGCCGCCTTCCTCATCGTGATGGTGGTGACCAACCCCGA
TGTCAGTGCCTACCAGGGCATGTCGATGTTCCTGGTGCCCACCGACACCCCCGGCGTGAACATCGTGCGCGACATCGGCC
TCTACGGGGAGGCCGAAGGCCACGGCGGTCACGCGCTGATCCACTACGACAACGTGCGGGTGCCTGCGGACGCACTGCTC
GGCGGGGAAGGTCAGGCGTTCGCGATCGCGCAGACCCGCCTGGGCGGCGGCCGCATCCACCACGCCATGCGCACGATCGG
GCTGTCCCGCAAGGCGCTGGACATGATGTGCGAACGCGCGCTCAGCCGCCAGACCCAGGGCAGCCGGCTGTCGGACAAAC
AGTTCGTCCAGGGCTATATCGCCGACTCCTACGCCCAGCTGCTCCAGTTCCGGCTGATGGTGCTCTACACCGCATGGGAG
ATCGACAAGTACAACGATTACAAGAAGGTGCGCAAGGACATCGCCGCGGTCAAGGTGGTGATGCCGACCGTGCTGCACGA
CATCGCGTGGCGGGCCATGCAGGTGCACGGCGCGCTCGGGGTCACCAACGAGATGCCGTTCATGGGCATGGTCACCGGCG
CGGCGGTGATGGGCCTCGCCGACGGCCCCACCGAGGTGCACAAGACGACGGTCGCCAAACAGGTGCTACGCGATTACCGG
CCAGCCGAAGGCACCTGGCCGTCGGAGTGGATTCCTGCCAAACGTGAAGCGGCGCGCGCCAAGTACGCCGATTTCCTCGA
GCACGAAGTGGGCAACCTGTGA

Upstream 100 bases:

>100_bases
CGCGTTCGGCGACCGGTCGTTCACCGAGGTGGTGGGCGCCGACATCGACGCTTTGATCGCGGGTCTGAGCCGCGAACCCT
GAGAAGACGAAGGAGTCACG

Downstream 100 bases:

>100_bases
CGCAATCCGATTCTGCTCCTCACGTGCGCGACATCGACACTGCCCGCCTCGCCACGTGGATGGACGAGGCGGCGTTGCCG
GGTAAGGGCGAACCGCTGCA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MAWDFETDPEYQKVLDWADEFVREEVEPLDLVWPHQQFVPLDGERRRAIDPLKEEVRRQGLWATHLGPDLGGQGYGQLKL
ALLNEILGRSQWAPIVFGCQAPDTGNAEIIAHYGTDEQKERYLRPLLDGELFSCYSMTEPHAGADPTLFTTRAVRDGDHW
VINGQKFFSSNASTAAFLIVMVVTNPDVSAYQGMSMFLVPTDTPGVNIVRDIGLYGEAEGHGGHALIHYDNVRVPADALL
GGEGQAFAIAQTRLGGGRIHHAMRTIGLSRKALDMMCERALSRQTQGSRLSDKQFVQGYIADSYAQLLQFRLMVLYTAWE
IDKYNDYKKVRKDIAAVKVVMPTVLHDIAWRAMQVHGALGVTNEMPFMGMVTGAAVMGLADGPTEVHKTTVAKQVLRDYR
PAEGTWPSEWIPAKREAARAKYADFLEHEVGNL

Sequences:

>Translated_433_residues
MAWDFETDPEYQKVLDWADEFVREEVEPLDLVWPHQQFVPLDGERRRAIDPLKEEVRRQGLWATHLGPDLGGQGYGQLKL
ALLNEILGRSQWAPIVFGCQAPDTGNAEIIAHYGTDEQKERYLRPLLDGELFSCYSMTEPHAGADPTLFTTRAVRDGDHW
VINGQKFFSSNASTAAFLIVMVVTNPDVSAYQGMSMFLVPTDTPGVNIVRDIGLYGEAEGHGGHALIHYDNVRVPADALL
GGEGQAFAIAQTRLGGGRIHHAMRTIGLSRKALDMMCERALSRQTQGSRLSDKQFVQGYIADSYAQLLQFRLMVLYTAWE
IDKYNDYKKVRKDIAAVKVVMPTVLHDIAWRAMQVHGALGVTNEMPFMGMVTGAAVMGLADGPTEVHKTTVAKQVLRDYR
PAEGTWPSEWIPAKREAARAKYADFLEHEVGNL
>Mature_432_residues
AWDFETDPEYQKVLDWADEFVREEVEPLDLVWPHQQFVPLDGERRRAIDPLKEEVRRQGLWATHLGPDLGGQGYGQLKLA
LLNEILGRSQWAPIVFGCQAPDTGNAEIIAHYGTDEQKERYLRPLLDGELFSCYSMTEPHAGADPTLFTTRAVRDGDHWV
INGQKFFSSNASTAAFLIVMVVTNPDVSAYQGMSMFLVPTDTPGVNIVRDIGLYGEAEGHGGHALIHYDNVRVPADALLG
GEGQAFAIAQTRLGGGRIHHAMRTIGLSRKALDMMCERALSRQTQGSRLSDKQFVQGYIADSYAQLLQFRLMVLYTAWEI
DKYNDYKKVRKDIAAVKVVMPTVLHDIAWRAMQVHGALGVTNEMPFMGMVTGAAVMGLADGPTEVHKTTVAKQVLRDYRP
AEGTWPSEWIPAKREAARAKYADFLEHEVGNL

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI38505218, Length=355, Percent_Identity=42.5352112676056, Blast_Score=269, Evalue=3e-72,
Organism=Homo sapiens, GI48976061, Length=357, Percent_Identity=38.655462184874, Blast_Score=242, Evalue=4e-64,
Organism=Homo sapiens, GI211971008, Length=357, Percent_Identity=38.655462184874, Blast_Score=242, Evalue=5e-64,
Organism=Homo sapiens, GI4557233, Length=407, Percent_Identity=27.5184275184275, Blast_Score=147, Evalue=3e-35,
Organism=Homo sapiens, GI4557231, Length=414, Percent_Identity=27.0531400966184, Blast_Score=146, Evalue=4e-35,
Organism=Homo sapiens, GI187960098, Length=414, Percent_Identity=27.0531400966184, Blast_Score=146, Evalue=5e-35,
Organism=Homo sapiens, GI7656849, Length=403, Percent_Identity=26.7990074441687, Blast_Score=137, Evalue=2e-32,
Organism=Homo sapiens, GI4501859, Length=383, Percent_Identity=27.4151436031332, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI226958414, Length=375, Percent_Identity=27.2, Blast_Score=122, Evalue=9e-28,
Organism=Homo sapiens, GI226958412, Length=331, Percent_Identity=27.190332326284, Blast_Score=120, Evalue=3e-27,
Organism=Homo sapiens, GI21361497, Length=351, Percent_Identity=24.7863247863248, Blast_Score=116, Evalue=4e-26,
Organism=Homo sapiens, GI4501857, Length=393, Percent_Identity=25.4452926208651, Blast_Score=109, Evalue=6e-24,
Organism=Homo sapiens, GI76496475, Length=410, Percent_Identity=24.390243902439, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4557235, Length=410, Percent_Identity=24.390243902439, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI4503943, Length=406, Percent_Identity=22.9064039408867, Blast_Score=80, Evalue=6e-15,
Organism=Homo sapiens, GI7669494, Length=375, Percent_Identity=24.2666666666667, Blast_Score=78, Evalue=2e-14,
Organism=Escherichia coli, GI87081958, Length=292, Percent_Identity=23.972602739726, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786223, Length=334, Percent_Identity=23.6526946107784, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562446, Length=398, Percent_Identity=39.1959798994975, Blast_Score=254, Evalue=7e-68,
Organism=Caenorhabditis elegans, GI17534899, Length=349, Percent_Identity=28.6532951289398, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17569725, Length=355, Percent_Identity=27.887323943662, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17506239, Length=394, Percent_Identity=26.6497461928934, Blast_Score=124, Evalue=7e-29,
Organism=Caenorhabditis elegans, GI17538396, Length=351, Percent_Identity=27.0655270655271, Blast_Score=121, Evalue=6e-28,
Organism=Caenorhabditis elegans, GI17533517, Length=392, Percent_Identity=24.7448979591837, Blast_Score=120, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17508101, Length=345, Percent_Identity=28.1159420289855, Blast_Score=117, Evalue=8e-27,
Organism=Caenorhabditis elegans, GI17570075, Length=378, Percent_Identity=23.8095238095238, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI71985184, Length=341, Percent_Identity=25.8064516129032, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI71982178, Length=286, Percent_Identity=27.6223776223776, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17505929, Length=305, Percent_Identity=25.9016393442623, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71985192, Length=272, Percent_Identity=27.2058823529412, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17551932, Length=343, Percent_Identity=24.7813411078717, Blast_Score=99, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=191, Percent_Identity=31.413612565445, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=213, Percent_Identity=30.0469483568075, Blast_Score=96, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17534353, Length=299, Percent_Identity=22.742474916388, Blast_Score=68, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24660351, Length=402, Percent_Identity=29.3532338308458, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI21356377, Length=350, Percent_Identity=28, Blast_Score=132, Evalue=5e-31,
Organism=Drosophila melanogaster, GI21355753, Length=398, Percent_Identity=27.3869346733668, Blast_Score=132, Evalue=6e-31,
Organism=Drosophila melanogaster, GI24666513, Length=399, Percent_Identity=26.8170426065163, Blast_Score=127, Evalue=1e-29,
Organism=Drosophila melanogaster, GI24646207, Length=349, Percent_Identity=28.080229226361, Blast_Score=125, Evalue=4e-29,
Organism=Drosophila melanogaster, GI281363737, Length=381, Percent_Identity=24.1469816272966, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19920834, Length=294, Percent_Identity=24.1496598639456, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: =1.3.99.21 [H]

Molecular weight: Translated: 48315; Mature: 48183

Theoretical pI: Translated: 5.73; Mature: 5.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWDFETDPEYQKVLDWADEFVREEVEPLDLVWPHQQFVPLDGERRRAIDPLKEEVRRQG
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHHCCHHHHHHHHCC
LWATHLGPDLGGQGYGQLKLALLNEILGRSQWAPIVFGCQAPDTGNAEIIAHYGTDEQKE
CEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCHHHH
RYLRPLLDGELFSCYSMTEPHAGADPTLFTTRAVRDGDHWVINGQKFFSSNASTAAFLIV
HHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHCCCCCCEEEEEE
MVVTNPDVSAYQGMSMFLVPTDTPGVNIVRDIGLYGEAEGHGGHALIHYDNVRVPADALL
EEEECCCHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHC
GGEGQAFAIAQTRLGGGRIHHAMRTIGLSRKALDMMCERALSRQTQGSRLSDKQFVQGYI
CCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ADSYAQLLQFRLMVLYTAWEIDKYNDYKKVRKDIAAVKVVMPTVLHDIAWRAMQVHGALG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTNEMPFMGMVTGAAVMGLADGPTEVHKTTVAKQVLRDYRPAEGTWPSEWIPAKREAARA
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
KYADFLEHEVGNL
HHHHHHHHHHCCC
>Mature Secondary Structure 
AWDFETDPEYQKVLDWADEFVREEVEPLDLVWPHQQFVPLDGERRRAIDPLKEEVRRQG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCEECCCCCHHHHCCHHHHHHHHCC
LWATHLGPDLGGQGYGQLKLALLNEILGRSQWAPIVFGCQAPDTGNAEIIAHYGTDEQKE
CEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCEEEEECCCCHHHH
RYLRPLLDGELFSCYSMTEPHAGADPTLFTTRAVRDGDHWVINGQKFFSSNASTAAFLIV
HHHHHHHCCCHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEECCHHHHCCCCCCEEEEEE
MVVTNPDVSAYQGMSMFLVPTDTPGVNIVRDIGLYGEAEGHGGHALIHYDNVRVPADALL
EEEECCCHHHHCCCEEEEEECCCCCCHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHC
GGEGQAFAIAQTRLGGGRIHHAMRTIGLSRKALDMMCERALSRQTQGSRLSDKQFVQGYI
CCCCCEEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
ADSYAQLLQFRLMVLYTAWEIDKYNDYKKVRKDIAAVKVVMPTVLHDIAWRAMQVHGALG
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
VTNEMPFMGMVTGAAVMGLADGPTEVHKTTVAKQVLRDYRPAEGTWPSEWIPAKREAARA
CCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
KYADFLEHEVGNL
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10629170; 12420174 [H]