| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869838
Identifier: 119869838
GI number: 119869838
Start: 4021384
End: 4022034
Strand: Direct
Name: 119869838
Synonym: Mkms_3807
Alternate gene names: NA
Gene position: 4021384-4022034 (Clockwise)
Preceding gene: 119869835
Following gene: 119869839
Centisome position: 70.09
GC content: 68.82
Gene sequence:
>651_bases ATGCCTCGCCCCGCCACCCCGATGCCGACTGACCGTGGTCAGCGCCGTACGTCGCTGCAGCAGGAGCGGTCGCGGGAGAC CAAGCGGATGCTGGTGCAGGCCGCGATGGCGCTGTGGCGGACCAACGGGTATGCGAACACCACGGTCGCCGACATCTGCA CCGCGGCCGGGGTGTCGAAGGCGTTGTTCTACTTCTACTTCCCGCGCAAAGAGGACGTTCTGTTCGAAGTGGGTGTGATG TCCACCCGCTCGGCGCGGCAGACCGCCGATGCGCTGCTGGCCAAGCCCTATGAGGTCCCGGCGGTGATCGCAGCGGCACT GGCCGACCTCGAGAGGTCGATGGCGCGCAACCCACCGGAACTGGTCGTCGCGGCGATACTGGAGGGCTACCGTCACGAGC ACCGGATCCTGGCCGGCGCCGAAGCCGTCGAGGACGACGGTGGGATGTTCACCGCACTGTTCGACCGCGCCCAGCGCGAC GGCAAGTTGGCCCGGCACATCGATGCCGGCCATCTGGCGTATCTGGCGCACACGCTGGTCAGCGAGGGCGCCCGGCACTG GGCCGTCGGCGCGTTCGGCGACCGGTCGTTCACCGAGGTGGTGGGCGCCGACATCGACGCTTTGATCGCGGGTCTGAGCC GCGAACCCTGA
Upstream 100 bases:
>100_bases GCGCCGATGCGCGAGACGGATCCATCGCCCGACCATAGGCTCAAAGTTTGTCACGGGTCAACTATTCCCATACGCAGAAT TGCCCTGTAGTTTCCGTCTT
Downstream 100 bases:
>100_bases GAAGACGAAGGAGTCACGATGGCGTGGGATTTCGAGACCGACCCCGAGTACCAGAAGGTCCTCGACTGGGCCGATGAGTT CGTGCGGGAGGAGGTCGAAC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Repressor TetR Family Protein; Regulatory Protein TetR
Number of amino acids: Translated: 216; Mature: 215
Protein sequence:
>216_residues MPRPATPMPTDRGQRRTSLQQERSRETKRMLVQAAMALWRTNGYANTTVADICTAAGVSKALFYFYFPRKEDVLFEVGVM STRSARQTADALLAKPYEVPAVIAAALADLERSMARNPPELVVAAILEGYRHEHRILAGAEAVEDDGGMFTALFDRAQRD GKLARHIDAGHLAYLAHTLVSEGARHWAVGAFGDRSFTEVVGADIDALIAGLSREP
Sequences:
>Translated_216_residues MPRPATPMPTDRGQRRTSLQQERSRETKRMLVQAAMALWRTNGYANTTVADICTAAGVSKALFYFYFPRKEDVLFEVGVM STRSARQTADALLAKPYEVPAVIAAALADLERSMARNPPELVVAAILEGYRHEHRILAGAEAVEDDGGMFTALFDRAQRD GKLARHIDAGHLAYLAHTLVSEGARHWAVGAFGDRSFTEVVGADIDALIAGLSREP >Mature_215_residues PRPATPMPTDRGQRRTSLQQERSRETKRMLVQAAMALWRTNGYANTTVADICTAAGVSKALFYFYFPRKEDVLFEVGVMS TRSARQTADALLAKPYEVPAVIAAALADLERSMARNPPELVVAAILEGYRHEHRILAGAEAVEDDGGMFTALFDRAQRDG KLARHIDAGHLAYLAHTLVSEGARHWAVGAFGDRSFTEVVGADIDALIAGLSREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23640; Mature: 23509
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPATPMPTDRGQRRTSLQQERSRETKRMLVQAAMALWRTNGYANTTVADICTAAGVSK CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALFYFYFPRKEDVLFEVGVMSTRSARQTADALLAKPYEVPAVIAAALADLERSMARNPPE HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH LVVAAILEGYRHEHRILAGAEAVEDDGGMFTALFDRAQRDGKLARHIDAGHLAYLAHTLV HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH SEGARHWAVGAFGDRSFTEVVGADIDALIAGLSREP HCCCHHEEEECCCCCHHHHHHHCCHHHHHHHHCCCC >Mature Secondary Structure PRPATPMPTDRGQRRTSLQQERSRETKRMLVQAAMALWRTNGYANTTVADICTAAGVSK CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH ALFYFYFPRKEDVLFEVGVMSTRSARQTADALLAKPYEVPAVIAAALADLERSMARNPPE HHHHEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHH LVVAAILEGYRHEHRILAGAEAVEDDGGMFTALFDRAQRDGKLARHIDAGHLAYLAHTLV HHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHH SEGARHWAVGAFGDRSFTEVVGADIDALIAGLSREP HCCCHHEEEECCCCCHHHHHHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA