| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119869640
Identifier: 119869640
GI number: 119869640
Start: 3795142
End: 3796383
Strand: Direct
Name: 119869640
Synonym: Mkms_3608
Alternate gene names: NA
Gene position: 3795142-3796383 (Clockwise)
Preceding gene: 119869639
Following gene: 119869644
Centisome position: 66.15
GC content: 72.95
Gene sequence:
>1242_bases ATGACGGCGCCGACGCAGAAGGTGGCCGTCGCGATCATCGGCGGCGGACCCGCGGGCCTCACCGCCGCGGCGGCGCTCGC ACCCGACGTCGACGTGCTGGTGCTCGAACGCGAGGCCATGACCGGCGGAATCCCCAGGCACAGCGATCATCCCGGCTACG GAATGCGCGACCTCCGGCGATTCATGTCCGGACCCGCATACGCGCGACGGCTGACCGCCCAGGCACTCGACGCCGGGGCC ATGCTCGAGACCGAGGCGATGGTGACCGGTTGGGGCGGTGAGCGACTGCTGCAGGTCACCACCCCCCGCGGTGTGCGGAC GGTGTCGGCCGATGCGGTCGTGCTGGCCACCGGTGCGCGGGAGCGTCCGCGACCGGCCCGGCTCATCCCCGGTGACCGGC CCGACGGGGTGTACACCACCGGACAGCTGCAGAACCTCGTGCACCTGCACCACGCGCGGGTCGGTACGCGCGCGCTGATC GTCGGCGCCGAACTGGTCAGCTGGTCGGCGGTGCTGACGCTGCGCGAGGCGGGTTGCGCCACCGTCGCGATGGTCAGCCG GTACCCGAGATCCGAAGCCTATGCCGGGTTTAGGGTCCCGGGCCGGGCGTTGATGAGCGGACCGGTGCTCACCCGCAGCC GGCTGGTGAGCATCCACGGCAAGGACCGGGTGCGCAAGGCGGTGGTCGAGAACCTCGACGCCGGTGAGCGCACCACCGTC GACTGCGACACCGTCGTGTTCACCGGCGACTGGATCCCCGACCACGAGCTGGCCCGCACCGGCGGTCTGGCGATGGACGC CCGAACCCGCGGCCCCGTCGTCGACGCCGCGTTGCGCACCAGCGCGCCCGGCGTGTTCGCGGTGGGCAACCTGCTGCACC CGGTGGACACCGCCGACGGGGCGGCGCTCGACGGACGCCACGTGGCCGCGGCGGTGCGGGGCTGGCTGCAGCGCCGCGAA GAACCGTCGCCGGGCGTGCGAATCCGCACCGATGAGCCGTTCAAATGGGTCGCACCGCAACTCATCTCGCCTAACGGCGG GGCCGCCGCCAGGGGTGACCTGCTGTTCTGGGTCGACGAGTACCGCCGGCTGCCCAAGTTGCGGGCGGTGCAGGACGGCC GGGTGTTGGCGACGGCCCGCACACCATGGCCCGCGGCGCCGGGGCGGGTCTATCGCGCGCCGTGGTCGCTGGTGGCGAAC GCCGATCCGAACGGCGGCGACGTCACGGTGGAGTTCGCCTGA
Upstream 100 bases:
>100_bases TGATGAACGGCCGTTGCCAGGGGTTCTACTGCGGAGCCCATACGCAGGCGCTTTTGGAGTCCAGCGGCGCCGAGGATGCC GACGATGTGGCGGCGGTGCG
Downstream 100 bases:
>100_bases CCCTCACTGCGCGAGCAGACACAGAGTCGCGTGATCCCCTACGCGAGAGGGCGATTCTGTGTCTGCTCGCGGGGGGAAGG TGAGTTACACCGGCAGCAGC
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Sarcosine Oxidase Alpha Subunit; NAD(FAD)-Dependent Dehydrogenase; Oxidoreductase; NADH Oxidase; Pyridine Nucleotide-Disulfide Oxidoreductase; Sarcosine Oxidase Subunit Alpha; Proline Dehydrogenase Alpha Subunit; Pyridine Nucleotide-Disulphide Oxidoreductase; Pyridine Nucleotide-Disulfide Family Oxidoreductase; Pyridine Nucleotide-Disulfide Oxidoreductase Family Protein; FAD Dependent Oxidoreductase; Monooxygenase; tRNA Uridine 5-Carboxymethylaminomethyl GidA; Aminoacyl-TRNA Synthetase; D-Nopaline Dehydrogenase; Protein With Conserved CXXC Pairs; Dye-L-ProDH Alpha
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTAPTQKVAVAIIGGGPAGLTAAAALAPDVDVLVLEREAMTGGIPRHSDHPGYGMRDLRRFMSGPAYARRLTAQALDAGA MLETEAMVTGWGGERLLQVTTPRGVRTVSADAVVLATGARERPRPARLIPGDRPDGVYTTGQLQNLVHLHHARVGTRALI VGAELVSWSAVLTLREAGCATVAMVSRYPRSEAYAGFRVPGRALMSGPVLTRSRLVSIHGKDRVRKAVVENLDAGERTTV DCDTVVFTGDWIPDHELARTGGLAMDARTRGPVVDAALRTSAPGVFAVGNLLHPVDTADGAALDGRHVAAAVRGWLQRRE EPSPGVRIRTDEPFKWVAPQLISPNGGAAARGDLLFWVDEYRRLPKLRAVQDGRVLATARTPWPAAPGRVYRAPWSLVAN ADPNGGDVTVEFA
Sequences:
>Translated_413_residues MTAPTQKVAVAIIGGGPAGLTAAAALAPDVDVLVLEREAMTGGIPRHSDHPGYGMRDLRRFMSGPAYARRLTAQALDAGA MLETEAMVTGWGGERLLQVTTPRGVRTVSADAVVLATGARERPRPARLIPGDRPDGVYTTGQLQNLVHLHHARVGTRALI VGAELVSWSAVLTLREAGCATVAMVSRYPRSEAYAGFRVPGRALMSGPVLTRSRLVSIHGKDRVRKAVVENLDAGERTTV DCDTVVFTGDWIPDHELARTGGLAMDARTRGPVVDAALRTSAPGVFAVGNLLHPVDTADGAALDGRHVAAAVRGWLQRRE EPSPGVRIRTDEPFKWVAPQLISPNGGAAARGDLLFWVDEYRRLPKLRAVQDGRVLATARTPWPAAPGRVYRAPWSLVAN ADPNGGDVTVEFA >Mature_412_residues TAPTQKVAVAIIGGGPAGLTAAAALAPDVDVLVLEREAMTGGIPRHSDHPGYGMRDLRRFMSGPAYARRLTAQALDAGAM LETEAMVTGWGGERLLQVTTPRGVRTVSADAVVLATGARERPRPARLIPGDRPDGVYTTGQLQNLVHLHHARVGTRALIV GAELVSWSAVLTLREAGCATVAMVSRYPRSEAYAGFRVPGRALMSGPVLTRSRLVSIHGKDRVRKAVVENLDAGERTTVD CDTVVFTGDWIPDHELARTGGLAMDARTRGPVVDAALRTSAPGVFAVGNLLHPVDTADGAALDGRHVAAAVRGWLQRREE PSPGVRIRTDEPFKWVAPQLISPNGGAAARGDLLFWVDEYRRLPKLRAVQDGRVLATARTPWPAAPGRVYRAPWSLVANA DPNGGDVTVEFA
Specific function: Unknown
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44006; Mature: 43875
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPTQKVAVAIIGGGPAGLTAAAALAPDVDVLVLEREAMTGGIPRHSDHPGYGMRDLRR CCCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCHHHHHH FMSGPAYARRLTAQALDAGAMLETEAMVTGWGGERLLQVTTPRGVRTVSADAVVLATGAR HHCCHHHHHHHHHHHHCCCCEEEECEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCC ERPRPARLIPGDRPDGVYTTGQLQNLVHLHHARVGTRALIVGAELVSWSAVLTLREAGCA CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEEHHCCCH TVAMVSRYPRSEAYAGFRVPGRALMSGPVLTRSRLVSIHGKDRVRKAVVENLDAGERTTV HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEE DCDTVVFTGDWIPDHELARTGGLAMDARTRGPVVDAALRTSAPGVFAVGNLLHPVDTADG ECCEEEEECCCCCCHHHHHCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCC AALDGRHVAAAVRGWLQRREEPSPGVRIRTDEPFKWVAPQLISPNGGAAARGDLLFWVDE CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHCCCEEECCCCCCCCCCCEEEEEHH YRRLPKLRAVQDGRVLATARTPWPAAPGRVYRAPWSLVANADPNGGDVTVEFA HHCCCHHHCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEC >Mature Secondary Structure TAPTQKVAVAIIGGGPAGLTAAAALAPDVDVLVLEREAMTGGIPRHSDHPGYGMRDLRR CCCCCEEEEEEECCCCHHHHHHHHHCCCCEEEEEEEHHHHCCCCCCCCCCCCCHHHHHH FMSGPAYARRLTAQALDAGAMLETEAMVTGWGGERLLQVTTPRGVRTVSADAVVLATGAR HHCCHHHHHHHHHHHHCCCCEEEECEEEECCCCCEEEEEECCCCEEEECCCEEEEECCCC ERPRPARLIPGDRPDGVYTTGQLQNLVHLHHARVGTRALIVGAELVSWSAVLTLREAGCA CCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHEEEHHCCCH TVAMVSRYPRSEAYAGFRVPGRALMSGPVLTRSRLVSIHGKDRVRKAVVENLDAGERTTV HHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCEEE DCDTVVFTGDWIPDHELARTGGLAMDARTRGPVVDAALRTSAPGVFAVGNLLHPVDTADG ECCEEEEECCCCCCHHHHHCCCEEEECCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCC AALDGRHVAAAVRGWLQRREEPSPGVRIRTDEPFKWVAPQLISPNGGAAARGDLLFWVDE CCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHCCCEEECCCCCCCCCCCEEEEEHH YRRLPKLRAVQDGRVLATARTPWPAAPGRVYRAPWSLVANADPNGGDVTVEFA HHCCCHHHCCCCCEEEEEECCCCCCCCCCEEECCEEEEECCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA