Click here to switch to the map view.

The map label for this gene is rbsK [H]

Identifier: 119869644

GI number: 119869644

Start: 3800143

End: 3801000

Strand: Direct

Name: rbsK [H]

Synonym: Mkms_3612

Alternate gene names: 119869644

Gene position: 3800143-3801000 (Clockwise)

Preceding gene: 119869640

Following gene: 119869645

Centisome position: 66.24

GC content: 73.54

Gene sequence:

>858_bases
ATGGCGGCGGCGCGTGTCTGCGTGGTGGGCAGTGTGAACGCCGATCTGCGCTTCGCGGTGCCGTCGCTACCGCGCCCCGG
CCAGACCGTCCTCGCGTCCTCGATGACGACCTCGCCCGGCGGCAAGGGTGGCAATCAGGCGATCGCCGCGGCGCGGGCCG
GCGGCGACGTCTCGCTGGTGGCAGCACTCGGCGACGACCCGGCGGCCGGGCAGTTGCGCGCTCACCTGCGCGCGAACGGG
GTCGGCCTCGACGGTGTGGTGACGGTGCCCGGCCCCAGCGGCTCGGCCGTCGTGATCGTCGACGCCGCCGCGGAGAACGC
CATCGTCGTCGCGCCCGGCGCCAATGCGCACCTGAGCGTGGCGTCGTCGGCGGTGCGTGAGGCGATCGCCGGGGCGGACG
TCGTGCTCCTGCAACTCGAGATCCCACTGCATACGGCGAACGACGCGGCCCGGGTGGCGCGCGATGCGGGCGCGGTGGTG
ATGGTGAACGCCTCCCCCGCGGGCGCGCCGCCCCACGAGCTGCTGAGGCTGTCCGAAGTGGCCGACGTGGTGGTGGTCAA
TCAGGCCGAGGCCGGTGAATGGCATTGGCCGGTTCCGCATCTGGTCATCACCCGCGGCGCCCGCGGGGCGAGCTACCTCG
GTGACGGTGAGCGGTTCGACGTCCCGGCACCCGCGGTCGAGGCCGTCGACACCACCGGCGCCGGTGACGTGTTCGCCGGA
GTGCTGGCCGTGCATTGGCGGTCCGGACACGAGAACGCGTTGCGCCGCGCGTGCGTCGCGGGCGCGCTGGCCACCCTGGT
ACCCGGCGCGGGTGACTGCGCTCCCACCGCCGAAGCGATCGACGACACATTGAGATGA

Upstream 100 bases:

>100_bases
GGGGGCGTGCACACTCATCAGTCCAGCGTATCGAAGGTGGCGGGGCCGGCCGACGCGTGTCAGGGTCACCGCCGTCCACC
GCTGGTCTAGCGTTACGCCC

Downstream 100 bases:

>100_bases
CAGGAGAAGCGATGTCAGAGCACGACGCCCCACGCCCACCGGACGGTGACTGGTTGGGCACGCCCTATCTGCGGTTCACC
CGCGAGGGGGCGTTCGGGGT

Product: ribokinase-like domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 284

Protein sequence:

>285_residues
MAAARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLVAALGDDPAAGQLRAHLRANG
VGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSVASSAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVV
MVNASPAGAPPHELLRLSEVADVVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAG
VLAVHWRSGHENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR

Sequences:

>Translated_285_residues
MAAARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLVAALGDDPAAGQLRAHLRANG
VGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSVASSAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVV
MVNASPAGAPPHELLRLSEVADVVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAG
VLAVHWRSGHENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR
>Mature_284_residues
AAARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLVAALGDDPAAGQLRAHLRANGV
GLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSVASSAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVVM
VNASPAGAPPHELLRLSEVADVVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAGV
LAVHWRSGHENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR

Specific function: Ribose metabolism; first step. [C]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Homo sapiens, GI11545855, Length=302, Percent_Identity=29.8013245033113, Blast_Score=103, Evalue=3e-22,
Organism=Escherichia coli, GI1790193, Length=263, Percent_Identity=36.8821292775665, Blast_Score=135, Evalue=2e-33,
Organism=Escherichia coli, GI87082343, Length=253, Percent_Identity=30.8300395256917, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17532905, Length=271, Percent_Identity=33.9483394833948, Blast_Score=108, Evalue=2e-24,
Organism=Drosophila melanogaster, GI20128807, Length=311, Percent_Identity=33.4405144694534, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24583886, Length=264, Percent_Identity=29.9242424242424, Blast_Score=89, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR011877
- InterPro:   IPR002139 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.15 [H]

Molecular weight: Translated: 28298; Mature: 28167

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLV
CCCCEEEEEECCCCCEEEECCCCCCCCHHEEEECCCCCCCCCCCCCEEEEEECCCCEEEE
AALGDDPAAGQLRAHLRANGVGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSV
EEECCCCCCCHHEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCCCHHH
ASSAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVVMVNASPAGAPPHELLRLSEV
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
ADVVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAG
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHCCCCCCHHHHHH
VLAVHWRSGHENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR
HHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
AAARVCVVGSVNADLRFAVPSLPRPGQTVLASSMTTSPGGKGGNQAIAAARAGGDVSLV
CCCEEEEEECCCCCEEEECCCCCCCCHHEEEECCCCCCCCCCCCCEEEEEECCCCEEEE
AALGDDPAAGQLRAHLRANGVGLDGVVTVPGPSGSAVVIVDAAAENAIVVAPGANAHLSV
EEECCCCCCCHHEEEEEECCCCCCCEEECCCCCCCEEEEEEECCCCEEEEECCCCCCHHH
ASSAVREAIAGADVVLLQLEIPLHTANDAARVARDAGAVVMVNASPAGAPPHELLRLSEV
HHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHH
ADVVVVNQAEAGEWHWPVPHLVITRGARGASYLGDGERFDVPAPAVEAVDTTGAGDVFAG
CEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCCCCCHHHCCCCCCHHHHHH
VLAVHWRSGHENALRRACVAGALATLVPGAGDCAPTAEAIDDTLR
HHHEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]