| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is glpK [H]
Identifier: 119869638
GI number: 119869638
Start: 3792279
End: 3793727
Strand: Direct
Name: glpK [H]
Synonym: Mkms_3606
Alternate gene names: 119869638
Gene position: 3792279-3793727 (Clockwise)
Preceding gene: 119869637
Following gene: 119869639
Centisome position: 66.1
GC content: 71.91
Gene sequence:
>1449_bases ATGACACATCTGCTCGCCATCGATCAGGGCACGTCGGGGACGAAGGCGATCGTCGTCGACTACGGCTCCGACGGGTCCGG TCGGGTGGTCTCGGTCGCCGAGGTCGCGTTGCGGCCGCAGTACCTCGCCGGTGGCGCGGTCGAGCAGGACCCGGAGGCGA TGTGGGATTCGGTGGTCGGTGCCGGCCGGGAAGCGTTGGCGCGGGCGGGTGTTCCCGTCGCGGCGGTCGCACTGGCCAAC CAGGGTGAGACGGTCCTGGCGTGGGACCGTGACACCGGCCGTCCGCTGACACCCGCAATCGTCTGGCAGGACCGTCGGGC CGAGTCGGTGTGCGCTCCGCTGGCCGGCTCGGCCGACCGGATCGCGCAGCGGACCGGGCTGGTGCTCGACCCGTACTTCT CGGCGCCGAAGATGGCGTGGCTGCGGGCCGCACTCACCCGCTCCGGGGTCGTCACCACCACCGACACCTGGCTGGTGCAC CGGATGTGCGGCGCGTTCGTCACCGACACCTCCACCGCGAGCCGGTCACTGCTGACCGCACTGGAATCCCCCACCTGGGA CGACGAACTGCTCGACCTGTTCGGACTGGCCGGGGAGTCGCTGCCCGCGATCGTCGACAGCGACCAGATCGTCGGCGAGA CAGACGTTTTCGGGCCGACGATCCCCGTCGCCGGTCTGATCGTCGACCAGCAGGCCGCCCTGCTGGCCGAGAGCTGCCTG GAGCCGGGCGCCGCCAAATGCACGTACGGCACCGGCGCGTTCTTGCTGGCGCAACTCGGCGAGACCCCGGCCCGGTCGTC GTCGGGGCTGACGACATCGGTGGCGTGGCGGCTGCGCGGTCAGACCTCGTACTGCGCCGACGGTCAGGTGTACACCGCCG CATCGGCCGTGCGGTGGGCCATCGACCTCGGCCTGGTACCCGCCGCGGACCACCTCGACACCGTCGCGACCGATTCGAGC GACGGGGTGCTGTGCGTCCCGGCGCTCGCGGGTCTGGCTGCGCCGTGGTGGGATTCGGCTGCGACGGCGTCGTTCACCGG TATGACGCTGTCGAGCACCCGCGGACACCTGGTGCGGGCGCTGCTGGAGGGTATCGCCGCCCAGGTCACCGCGCTGGCCG ACCTCGTCGGCACCGACCTCGGCCGTCCGCTGACCCGGTTGCGGGTCGACGGCGGGCTGACCCGCTCGACGGTGCTCATG CAGGCCCAGGCCGATCTCGCGCAGATCCCGGTCGACGTGTACCCGTCCCTGCACGCGACCGCGCTGGGCGCCGCCGCATG CGCGCGCCTGGCATTGGAGCCCTCGCTCACACCGGCCGAGGCCGTCGGCACGTGGACTCCCGTGCACACCTACGAACCCC GCTGGTCCGCCGACCACGCCGCCGACTACCTCCAGCGGTGGCGCCGGGCCGCGGAATCGACACTGCAGAACCAAGGAGAG ACCTCGTGA
Upstream 100 bases:
>100_bases ACCTGGGGTACCTGCTGGCCACCCGCGGCCGCCACGGCTTGTCGATGCCCGATATGCACTCGATCGACGCCGAACTCGAC CGTGAGGCCGCGAAGGACTG
Downstream 100 bases:
>100_bases GTACGCCCGACGTCAGCGACGTCAGCGACATCATCGTCGTGGGTGCGGGCATCGTGGGCAGCGCGATCGCGCGCGCCCTG GCCGGCACCGCGTTGTCGGT
Product: carbohydrate kinase
Products: NA
Alternate protein names: ATP:glycerol 3-phosphotransferase; Glycerokinase; GK [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MTHLLAIDQGTSGTKAIVVDYGSDGSGRVVSVAEVALRPQYLAGGAVEQDPEAMWDSVVGAGREALARAGVPVAAVALAN QGETVLAWDRDTGRPLTPAIVWQDRRAESVCAPLAGSADRIAQRTGLVLDPYFSAPKMAWLRAALTRSGVVTTTDTWLVH RMCGAFVTDTSTASRSLLTALESPTWDDELLDLFGLAGESLPAIVDSDQIVGETDVFGPTIPVAGLIVDQQAALLAESCL EPGAAKCTYGTGAFLLAQLGETPARSSSGLTTSVAWRLRGQTSYCADGQVYTAASAVRWAIDLGLVPAADHLDTVATDSS DGVLCVPALAGLAAPWWDSAATASFTGMTLSSTRGHLVRALLEGIAAQVTALADLVGTDLGRPLTRLRVDGGLTRSTVLM QAQADLAQIPVDVYPSLHATALGAAACARLALEPSLTPAEAVGTWTPVHTYEPRWSADHAADYLQRWRRAAESTLQNQGE TS
Sequences:
>Translated_482_residues MTHLLAIDQGTSGTKAIVVDYGSDGSGRVVSVAEVALRPQYLAGGAVEQDPEAMWDSVVGAGREALARAGVPVAAVALAN QGETVLAWDRDTGRPLTPAIVWQDRRAESVCAPLAGSADRIAQRTGLVLDPYFSAPKMAWLRAALTRSGVVTTTDTWLVH RMCGAFVTDTSTASRSLLTALESPTWDDELLDLFGLAGESLPAIVDSDQIVGETDVFGPTIPVAGLIVDQQAALLAESCL EPGAAKCTYGTGAFLLAQLGETPARSSSGLTTSVAWRLRGQTSYCADGQVYTAASAVRWAIDLGLVPAADHLDTVATDSS DGVLCVPALAGLAAPWWDSAATASFTGMTLSSTRGHLVRALLEGIAAQVTALADLVGTDLGRPLTRLRVDGGLTRSTVLM QAQADLAQIPVDVYPSLHATALGAAACARLALEPSLTPAEAVGTWTPVHTYEPRWSADHAADYLQRWRRAAESTLQNQGE TS >Mature_481_residues THLLAIDQGTSGTKAIVVDYGSDGSGRVVSVAEVALRPQYLAGGAVEQDPEAMWDSVVGAGREALARAGVPVAAVALANQ GETVLAWDRDTGRPLTPAIVWQDRRAESVCAPLAGSADRIAQRTGLVLDPYFSAPKMAWLRAALTRSGVVTTTDTWLVHR MCGAFVTDTSTASRSLLTALESPTWDDELLDLFGLAGESLPAIVDSDQIVGETDVFGPTIPVAGLIVDQQAALLAESCLE PGAAKCTYGTGAFLLAQLGETPARSSSGLTTSVAWRLRGQTSYCADGQVYTAASAVRWAIDLGLVPAADHLDTVATDSSD GVLCVPALAGLAAPWWDSAATASFTGMTLSSTRGHLVRALLEGIAAQVTALADLVGTDLGRPLTRLRVDGGLTRSTVLMQ AQADLAQIPVDVYPSLHATALGAAACARLALEPSLTPAEAVGTWTPVHTYEPRWSADHAADYLQRWRRAAESTLQNQGET S
Specific function: Key enzyme in the regulation of glycerol uptake and metabolism [H]
COG id: COG0554
COG function: function code C; Glycerol kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGGY kinase family [H]
Homologues:
Organism=Homo sapiens, GI4504007, Length=507, Percent_Identity=32.741617357002, Blast_Score=259, Evalue=3e-69, Organism=Homo sapiens, GI42794763, Length=513, Percent_Identity=32.3586744639376, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI189409120, Length=507, Percent_Identity=32.741617357002, Blast_Score=259, Evalue=4e-69, Organism=Homo sapiens, GI41393575, Length=435, Percent_Identity=34.2528735632184, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI88196792, Length=525, Percent_Identity=27.8095238095238, Blast_Score=195, Evalue=1e-49, Organism=Escherichia coli, GI1790361, Length=451, Percent_Identity=36.3636363636364, Blast_Score=285, Evalue=6e-78, Organism=Escherichia coli, GI1789987, Length=454, Percent_Identity=27.0925110132159, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI1789168, Length=371, Percent_Identity=24.2587601078167, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17535599, Length=502, Percent_Identity=32.2709163346614, Blast_Score=243, Evalue=1e-64, Organism=Caenorhabditis elegans, GI71986140, Length=544, Percent_Identity=23.7132352941176, Blast_Score=132, Evalue=3e-31, Organism=Caenorhabditis elegans, GI71986147, Length=311, Percent_Identity=28.2958199356913, Blast_Score=114, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6321755, Length=442, Percent_Identity=32.1266968325792, Blast_Score=187, Evalue=3e-48, Organism=Drosophila melanogaster, GI17864214, Length=503, Percent_Identity=33.2007952286282, Blast_Score=255, Evalue=4e-68, Organism=Drosophila melanogaster, GI24654573, Length=449, Percent_Identity=33.630289532294, Blast_Score=235, Evalue=4e-62, Organism=Drosophila melanogaster, GI24655555, Length=493, Percent_Identity=31.8458417849899, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24655560, Length=493, Percent_Identity=31.8458417849899, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24655570, Length=493, Percent_Identity=31.8458417849899, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24655574, Length=493, Percent_Identity=31.8458417849899, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24655565, Length=493, Percent_Identity=31.8458417849899, Blast_Score=224, Evalue=1e-58, Organism=Drosophila melanogaster, GI24656367, Length=513, Percent_Identity=26.7056530214425, Blast_Score=162, Evalue=3e-40, Organism=Drosophila melanogaster, GI21357867, Length=532, Percent_Identity=26.3157894736842, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24656372, Length=363, Percent_Identity=27.2727272727273, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI19922058, Length=524, Percent_Identity=24.0458015267176, Blast_Score=125, Evalue=9e-29, Organism=Drosophila melanogaster, GI24652871, Length=500, Percent_Identity=24, Blast_Score=118, Evalue=7e-27, Organism=Drosophila melanogaster, GI45552909, Length=301, Percent_Identity=28.2392026578073, Blast_Score=102, Evalue=6e-22,
Paralogues:
None
Copy number: 2,500 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000577 - InterPro: IPR018485 - InterPro: IPR018483 - InterPro: IPR018484 - InterPro: IPR005999 [H]
Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]
EC number: =2.7.1.30 [H]
Molecular weight: Translated: 50357; Mature: 50226
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: PS00445 FGGY_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHLLAIDQGTSGTKAIVVDYGSDGSGRVVSVAEVALRPQYLAGGAVEQDPEAMWDSVVG CCEEEEEECCCCCCEEEEEEECCCCCCCEEEEHHHHHCCHHHCCCCCCCCHHHHHHHHHH AGREALARAGVPVAAVALANQGETVLAWDRDTGRPLTPAIVWQDRRAESVCAPLAGSADR CCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCHHH IAQRTGLVLDPYFSAPKMAWLRAALTRSGVVTTTDTWLVHRMCGAFVTDTSTASRSLLTA HHHHCCCEECCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHH LESPTWDDELLDLFGLAGESLPAIVDSDQIVGETDVFGPTIPVAGLIVDQQAALLAESCL HCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHEEECHHHHHHHHHHC EPGAAKCTYGTGAFLLAQLGETPARSSSGLTTSVAWRLRGQTSYCADGQVYTAASAVRWA CCCCCEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHH IDLGLVPAADHLDTVATDSSDGVLCVPALAGLAAPWWDSAATASFTGMTLSSTRGHLVRA HHCCCCCCCHHHHHHCCCCCCCEEEHHHHHHCCCCCCCCCCCCEECCEEECCHHHHHHHH LLEGIAAQVTALADLVGTDLGRPLTRLRVDGGLTRSTVLMQAQADLAQIPVDVYPSLHAT HHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHEEEEHHHHHHHCCHHHCCCHHHH ALGAAACARLALEPSLTPAEAVGTWTPVHTYEPRWSADHAADYLQRWRRAAESTLQNQGE HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TS CC >Mature Secondary Structure THLLAIDQGTSGTKAIVVDYGSDGSGRVVSVAEVALRPQYLAGGAVEQDPEAMWDSVVG CEEEEEECCCCCCEEEEEEECCCCCCCEEEEHHHHHCCHHHCCCCCCCCHHHHHHHHHH AGREALARAGVPVAAVALANQGETVLAWDRDTGRPLTPAIVWQDRRAESVCAPLAGSADR CCHHHHHHCCCCEEEEEECCCCCEEEEEECCCCCCCCCCEEECCCCHHHHHHCCCCCHHH IAQRTGLVLDPYFSAPKMAWLRAALTRSGVVTTTDTWLVHRMCGAFVTDTSTASRSLLTA HHHHCCCEECCCCCCHHHHHHHHHHHHCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHH LESPTWDDELLDLFGLAGESLPAIVDSDQIVGETDVFGPTIPVAGLIVDQQAALLAESCL HCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCHHHEEECHHHHHHHHHHC EPGAAKCTYGTGAFLLAQLGETPARSSSGLTTSVAWRLRGQTSYCADGQVYTAASAVRWA CCCCCEEECCCHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEHHHHHHHH IDLGLVPAADHLDTVATDSSDGVLCVPALAGLAAPWWDSAATASFTGMTLSSTRGHLVRA HHCCCCCCCHHHHHHCCCCCCCEEEHHHHHHCCCCCCCCCCCCEECCEEECCHHHHHHHH LLEGIAAQVTALADLVGTDLGRPLTRLRVDGGLTRSTVLMQAQADLAQIPVDVYPSLHAT HHHHHHHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHEEEEHHHHHHHCCHHHCCCHHHH ALGAAACARLALEPSLTPAEAVGTWTPVHTYEPRWSADHAADYLQRWRRAAESTLQNQGE HHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC TS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA