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The map label for this gene is yliC [C]

Identifier: 119869486

GI number: 119869486

Start: 3621954

End: 3622922

Strand: Direct

Name: yliC [C]

Synonym: Mkms_3454

Alternate gene names: 119869486

Gene position: 3621954-3622922 (Clockwise)

Preceding gene: 119869485

Following gene: 119869487

Centisome position: 63.13

GC content: 68.83

Gene sequence:

>969_bases
ATGACGGCGTTGCTCACCCACCCCGTCGTACGCTTCCTCGCCCGGCGGATCGCCTATTCGCTGGTGGTGCTGATCGGTGT
GCTGGTCGTGGTGTTCGCACTCGTGCAGTTGGTGCCCGGTGACCCCGTGCGCATCGCGCTGGGAACCCGCTACACCCCGG
AGGCGTACGAGGCGCTGCGGTCGGCGAGCGGCCTGGACCGCCCGTTGATCGTGCAGTTCTTCAGTTATCTGGGCAATGCG
CTCACCGGTGATCTCGGGGTGAGTTTCCGCAACGGCGACCCGGTCACCGCCACCCTGCTCGACCGCCTGCCCGCGACGGT
GTCCCTGGGGTTGGTGGGCATCGTGTTCGCACTGCTCATCGCGGTGCCCGCGGGCATCTGGGCAGCGCTGCGCGAAGGCC
GGGTCAGCGATGCGATCGTGCGGGTGAGCAGCCAGTTCGGGGTCTCGGTCCCGGACTTCTGGCTCGGCATCCTGTTGATC
GCGCTGTTCTCGTCGACGCTGGGGTGGCTGCCGACGTCGGGGTACCGACCGCTGTTCGACGATCCGGCGGGCTGGCTGCG
CCACATCGTCCTGCCGGGGCTGACCGTCGGATTGGTGGCGGCGGCGATCATGACCCGCTACATCCGGTCCGCGGTGCTCG
AGGTCGCCTCGATGGGCTACGTGCGGACCGCCCGGTCGAAAGGCCTTGCGCCGCGGGTGGTCACGCTGCGCCACACGGTG
CGCAACGCGCTGATCCCGGTGCTCACCATCACCGGTATCCAACTCGCCACGATCCTGGGCGGCGTCATCGTCGTCGAGGT
GGTCTTCGCCTGGCCCGGCCTGGGCCGGCTCGTGTACAACGCCGTCGCCGCCCGCGACTACCCCCTCATCCAGGGCGCGG
TGCTGCTGATGGCCGCCCTGTTCTTGCTCATCAACCTGATCGTGGACGCGCTGTACGCGGTCGCCGACCCGAGGATCCGG
CTGTCATGA

Upstream 100 bases:

>100_bases
CGGTCATCCAGGCCTGGACCCCGGCCCTGTCGGGATACGAGGCACGCCGCGACGGTGCGGTCCGCTTCCGCGACGCCGTC
CTCGGTGAGGACGAAAGCTC

Downstream 100 bases:

>100_bases
GCGCCCCCGCCGACCACACCAGCCCCGAAACGCGAATCGCGTCGTGGCGGTTGCTGCTCGGCAACCCCGTCACGGTCGTC
AGCGCGGTCATCCTCGCGGT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTALLTHPVVRFLARRIAYSLVVLIGVLVVVFALVQLVPGDPVRIALGTRYTPEAYEALRSASGLDRPLIVQFFSYLGNA
LTGDLGVSFRNGDPVTATLLDRLPATVSLGLVGIVFALLIAVPAGIWAALREGRVSDAIVRVSSQFGVSVPDFWLGILLI
ALFSSTLGWLPTSGYRPLFDDPAGWLRHIVLPGLTVGLVAAAIMTRYIRSAVLEVASMGYVRTARSKGLAPRVVTLRHTV
RNALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLLMAALFLLINLIVDALYAVADPRIR
LS

Sequences:

>Translated_322_residues
MTALLTHPVVRFLARRIAYSLVVLIGVLVVVFALVQLVPGDPVRIALGTRYTPEAYEALRSASGLDRPLIVQFFSYLGNA
LTGDLGVSFRNGDPVTATLLDRLPATVSLGLVGIVFALLIAVPAGIWAALREGRVSDAIVRVSSQFGVSVPDFWLGILLI
ALFSSTLGWLPTSGYRPLFDDPAGWLRHIVLPGLTVGLVAAAIMTRYIRSAVLEVASMGYVRTARSKGLAPRVVTLRHTV
RNALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLLMAALFLLINLIVDALYAVADPRIR
LS
>Mature_321_residues
TALLTHPVVRFLARRIAYSLVVLIGVLVVVFALVQLVPGDPVRIALGTRYTPEAYEALRSASGLDRPLIVQFFSYLGNAL
TGDLGVSFRNGDPVTATLLDRLPATVSLGLVGIVFALLIAVPAGIWAALREGRVSDAIVRVSSQFGVSVPDFWLGILLIA
LFSSTLGWLPTSGYRPLFDDPAGWLRHIVLPGLTVGLVAAAIMTRYIRSAVLEVASMGYVRTARSKGLAPRVVTLRHTVR
NALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLLMAALFLLINLIVDALYAVADPRIRL
S

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=312, Percent_Identity=42.3076923076923, Blast_Score=240, Evalue=8e-65,
Organism=Escherichia coli, GI1789965, Length=336, Percent_Identity=37.797619047619, Blast_Score=234, Evalue=7e-63,
Organism=Escherichia coli, GI1789888, Length=315, Percent_Identity=39.6825396825397, Blast_Score=228, Evalue=5e-61,
Organism=Escherichia coli, GI1787761, Length=327, Percent_Identity=38.5321100917431, Blast_Score=184, Evalue=9e-48,
Organism=Escherichia coli, GI1787497, Length=314, Percent_Identity=34.0764331210191, Blast_Score=178, Evalue=5e-46,
Organism=Escherichia coli, GI1787550, Length=267, Percent_Identity=33.3333333333333, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1788504, Length=361, Percent_Identity=26.5927977839335, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34481; Mature: 34349

Theoretical pI: Translated: 10.55; Mature: 10.55

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTALLTHPVVRFLARRIAYSLVVLIGVLVVVFALVQLVPGDPVRIALGTRYTPEAYEALR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
SASGLDRPLIVQFFSYLGNALTGDLGVSFRNGDPVTATLLDRLPATVSLGLVGIVFALLI
HHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVPAGIWAALREGRVSDAIVRVSSQFGVSVPDFWLGILLIALFSSTLGWLPTSGYRPLFD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DPAGWLRHIVLPGLTVGLVAAAIMTRYIRSAVLEVASMGYVRTARSKGLAPRVVTLRHTV
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RNALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLLMAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
FLLINLIVDALYAVADPRIRLS
HHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure 
TALLTHPVVRFLARRIAYSLVVLIGVLVVVFALVQLVPGDPVRIALGTRYTPEAYEALR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH
SASGLDRPLIVQFFSYLGNALTGDLGVSFRNGDPVTATLLDRLPATVSLGLVGIVFALLI
HHCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
AVPAGIWAALREGRVSDAIVRVSSQFGVSVPDFWLGILLIALFSSTLGWLPTSGYRPLFD
HHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
DPAGWLRHIVLPGLTVGLVAAAIMTRYIRSAVLEVASMGYVRTARSKGLAPRVVTLRHTV
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RNALIPVLTITGIQLATILGGVIVVEVVFAWPGLGRLVYNAVAARDYPLIQGAVLLMAAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
FLLINLIVDALYAVADPRIRLS
HHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11756688 [H]