| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yjgI [H]
Identifier: 119869483
GI number: 119869483
Start: 3618994
End: 3619749
Strand: Direct
Name: yjgI [H]
Synonym: Mkms_3451
Alternate gene names: 119869483
Gene position: 3618994-3619749 (Clockwise)
Preceding gene: 119869479
Following gene: 119869485
Centisome position: 63.08
GC content: 71.83
Gene sequence:
>756_bases ATGACGGCTGCGGTGGAACAGAGACTGGCCGGTCGGCGGGCGCTGGTGACCGGCGGATCACGCGGTATCGGCGCGGAGAT CGTGCGCCGGCTGGCCTTCGAGGGGGCGGCCGTGGCGTTCACGTACGGGTCGTCGGTGAGCGATGCGGACAAGGTCGTGG TCGACGTGTCCCGCGGTGGCGGCCGGGTGTTGCCGATCCGCGCGGACAGTTCGGACGCCGGGCAGATCGCCTCGGCGGTC GACGAGACGGTCACCCGCCTCGGCGGCCTCGACATCCTGGTCAACAACGCCGGGGTGGCCCATCTCGGCGCGGTCGAGTC GTTTCCGCTCGACCAGTTCGACCGCCTGGTGGCGGTCAATGTCCGCGGCGTGTTCGTGGCGATCCAGTGCGCGGTCCCGC ATCTCGGCGACGGCGGGCGCATCATCAACATCGGCAGCGTCAACGCCGACCGGGTCCCGTCGCCCGGTCTGTCGGTGTAC GCGATGACGAAGGCCGCGGTGGCGGGGCTGACCCGCGGCCTGGCCCGCGAACTCGGGCCGCGCGGCATCACGGTCAACAC CGTCGCGCCCGGGCCGATCGCGACGGACATGAACCCCGCCGAAGGCGAGTTCGCCGACGCGGCAAGGGAAATCATCGCCG TCGGGCATTACGGGAACCCCACCGACGTGGCGGGCGTGGCGAGCTACCTGGCCGGCCCCGACGCCGGCTACGTGACCGGC GCCAACTGGACAGTCGACGGCGGGTTCACCGCCTGA
Upstream 100 bases:
>100_bases CGATCACCATCTTGCCGACGAAGCCGGTGCCCCACACGACGATCCGTTTGGTCATGCGCTCTTGCCTTCCGTCGGGATGT GTTCACCATAGGGTGAGACC
Downstream 100 bases:
>100_bases GCGGCCCGCAGAGATCTAGAAGCAGCGCCGCAGGCCGCCCGGCTCACAGATCAGCGGGTACTTGTCGACCGGGATCGGCA GTTCAGTCTTGTACGCCAAA
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MTAAVEQRLAGRRALVTGGSRGIGAEIVRRLAFEGAAVAFTYGSSVSDADKVVVDVSRGGGRVLPIRADSSDAGQIASAV DETVTRLGGLDILVNNAGVAHLGAVESFPLDQFDRLVAVNVRGVFVAIQCAVPHLGDGGRIINIGSVNADRVPSPGLSVY AMTKAAVAGLTRGLARELGPRGITVNTVAPGPIATDMNPAEGEFADAAREIIAVGHYGNPTDVAGVASYLAGPDAGYVTG ANWTVDGGFTA
Sequences:
>Translated_251_residues MTAAVEQRLAGRRALVTGGSRGIGAEIVRRLAFEGAAVAFTYGSSVSDADKVVVDVSRGGGRVLPIRADSSDAGQIASAV DETVTRLGGLDILVNNAGVAHLGAVESFPLDQFDRLVAVNVRGVFVAIQCAVPHLGDGGRIINIGSVNADRVPSPGLSVY AMTKAAVAGLTRGLARELGPRGITVNTVAPGPIATDMNPAEGEFADAAREIIAVGHYGNPTDVAGVASYLAGPDAGYVTG ANWTVDGGFTA >Mature_250_residues TAAVEQRLAGRRALVTGGSRGIGAEIVRRLAFEGAAVAFTYGSSVSDADKVVVDVSRGGGRVLPIRADSSDAGQIASAVD ETVTRLGGLDILVNNAGVAHLGAVESFPLDQFDRLVAVNVRGVFVAIQCAVPHLGDGGRIINIGSVNADRVPSPGLSVYA MTKAAVAGLTRGLARELGPRGITVNTVAPGPIATDMNPAEGEFADAAREIIAVGHYGNPTDVAGVASYLAGPDAGYVTGA NWTVDGGFTA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI32483357, Length=246, Percent_Identity=34.9593495934959, Blast_Score=120, Evalue=1e-27, Organism=Homo sapiens, GI15277342, Length=267, Percent_Identity=36.3295880149813, Blast_Score=118, Evalue=5e-27, Organism=Homo sapiens, GI5031737, Length=251, Percent_Identity=33.8645418326693, Blast_Score=108, Evalue=4e-24, Organism=Homo sapiens, GI7705925, Length=253, Percent_Identity=33.596837944664, Blast_Score=96, Evalue=2e-20, Organism=Homo sapiens, GI126723750, Length=253, Percent_Identity=31.6205533596838, Blast_Score=92, Evalue=6e-19, Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=32, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI40254992, Length=236, Percent_Identity=29.2372881355932, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=29.7619047619048, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI40254986, Length=193, Percent_Identity=30.5699481865285, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI33667109, Length=196, Percent_Identity=34.6938775510204, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI66933014, Length=262, Percent_Identity=28.2442748091603, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI59889578, Length=225, Percent_Identity=31.1111111111111, Blast_Score=82, Evalue=6e-16, Organism=Homo sapiens, GI7706318, Length=210, Percent_Identity=29.0476190476191, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI109715829, Length=237, Percent_Identity=30.379746835443, Blast_Score=79, Evalue=4e-15, Organism=Homo sapiens, GI31542939, Length=225, Percent_Identity=28.4444444444444, Blast_Score=74, Evalue=1e-13, Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=32.7868852459016, Blast_Score=72, Evalue=6e-13, Organism=Homo sapiens, GI4503817, Length=192, Percent_Identity=27.6041666666667, Blast_Score=67, Evalue=1e-11, Organism=Homo sapiens, GI4758504, Length=210, Percent_Identity=29.5238095238095, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI224922801, Length=179, Percent_Identity=29.0502793296089, Blast_Score=64, Evalue=9e-11, Organism=Escherichia coli, GI2367365, Length=243, Percent_Identity=44.0329218106996, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=34.1176470588235, Blast_Score=132, Evalue=2e-32, Organism=Escherichia coli, GI1789378, Length=246, Percent_Identity=37.3983739837398, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI1788459, Length=240, Percent_Identity=34.5833333333333, Blast_Score=123, Evalue=9e-30, Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=37.246963562753, Blast_Score=122, Evalue=2e-29, Organism=Escherichia coli, GI1789208, Length=255, Percent_Identity=34.5098039215686, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1787335, Length=245, Percent_Identity=35.1020408163265, Blast_Score=110, Evalue=1e-25, Organism=Escherichia coli, GI1790717, Length=246, Percent_Identity=29.6747967479675, Blast_Score=104, Evalue=6e-24, Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=34.1176470588235, Blast_Score=103, Evalue=1e-23, Organism=Escherichia coli, GI87082160, Length=248, Percent_Identity=31.8548387096774, Blast_Score=103, Evalue=2e-23, Organism=Escherichia coli, GI1786812, Length=258, Percent_Identity=29.0697674418605, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=29.0196078431373, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788891, Length=177, Percent_Identity=32.7683615819209, Blast_Score=66, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17562906, Length=263, Percent_Identity=34.6007604562738, Blast_Score=125, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17561402, Length=256, Percent_Identity=33.984375, Blast_Score=119, Evalue=2e-27, Organism=Caenorhabditis elegans, GI17531453, Length=263, Percent_Identity=34.6007604562738, Blast_Score=116, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17562910, Length=264, Percent_Identity=31.0606060606061, Blast_Score=112, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=32.3076923076923, Blast_Score=111, Evalue=3e-25, Organism=Caenorhabditis elegans, GI17562908, Length=263, Percent_Identity=32.319391634981, Blast_Score=110, Evalue=5e-25, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=30.8300395256917, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=31.3492063492063, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560676, Length=267, Percent_Identity=31.8352059925094, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=32.0610687022901, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17560220, Length=261, Percent_Identity=33.3333333333333, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17560332, Length=263, Percent_Identity=31.9391634980989, Blast_Score=103, Evalue=7e-23, Organism=Caenorhabditis elegans, GI17560150, Length=260, Percent_Identity=30.3846153846154, Blast_Score=102, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71982365, Length=201, Percent_Identity=29.3532338308458, Blast_Score=100, Evalue=8e-22, Organism=Caenorhabditis elegans, GI17538480, Length=261, Percent_Identity=31.8007662835249, Blast_Score=99, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25147288, Length=258, Percent_Identity=33.7209302325581, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI115534694, Length=252, Percent_Identity=32.1428571428571, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17562904, Length=260, Percent_Identity=29.6153846153846, Blast_Score=98, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17551412, Length=261, Percent_Identity=30.6513409961686, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17562990, Length=260, Percent_Identity=29.6153846153846, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17544670, Length=262, Percent_Identity=28.2442748091603, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17565030, Length=264, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=9e-18, Organism=Caenorhabditis elegans, GI17508651, Length=253, Percent_Identity=31.2252964426877, Blast_Score=84, Evalue=5e-17, Organism=Caenorhabditis elegans, GI17558628, Length=201, Percent_Identity=29.3532338308458, Blast_Score=84, Evalue=7e-17, Organism=Caenorhabditis elegans, GI17536651, Length=253, Percent_Identity=27.2727272727273, Blast_Score=83, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17555706, Length=251, Percent_Identity=29.0836653386454, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=27.6679841897233, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17538486, Length=274, Percent_Identity=27.007299270073, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI72000259, Length=262, Percent_Identity=28.6259541984733, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17563726, Length=257, Percent_Identity=28.4046692607004, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17561272, Length=209, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=4e-14, Organism=Caenorhabditis elegans, GI17508895, Length=202, Percent_Identity=26.7326732673267, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=31.9587628865979, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI17538182, Length=252, Percent_Identity=29.7619047619048, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17564282, Length=193, Percent_Identity=26.9430051813472, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6324126, Length=246, Percent_Identity=26.8292682926829, Blast_Score=66, Evalue=5e-12, Organism=Drosophila melanogaster, GI24644339, Length=252, Percent_Identity=34.1269841269841, Blast_Score=127, Evalue=9e-30, Organism=Drosophila melanogaster, GI21357041, Length=243, Percent_Identity=35.3909465020576, Blast_Score=126, Evalue=1e-29, Organism=Drosophila melanogaster, GI28571526, Length=242, Percent_Identity=34.7107438016529, Blast_Score=126, Evalue=2e-29, Organism=Drosophila melanogaster, GI21355319, Length=256, Percent_Identity=33.984375, Blast_Score=119, Evalue=1e-27, Organism=Drosophila melanogaster, GI23397609, Length=249, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=2e-25, Organism=Drosophila melanogaster, GI24643142, Length=247, Percent_Identity=32.7935222672065, Blast_Score=109, Evalue=2e-24, Organism=Drosophila melanogaster, GI24644337, Length=183, Percent_Identity=37.7049180327869, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24639444, Length=250, Percent_Identity=31.6, Blast_Score=100, Evalue=8e-22, Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=29.3532338308458, Blast_Score=92, Evalue=4e-19, Organism=Drosophila melanogaster, GI161076933, Length=210, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24584748, Length=210, Percent_Identity=30, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI17737361, Length=229, Percent_Identity=31.8777292576419, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI221331218, Length=211, Percent_Identity=30.3317535545024, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665243, Length=219, Percent_Identity=29.2237442922374, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24641232, Length=240, Percent_Identity=26.25, Blast_Score=69, Evalue=3e-12, Organism=Drosophila melanogaster, GI221331216, Length=209, Percent_Identity=29.1866028708134, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24665247, Length=217, Percent_Identity=28.110599078341, Blast_Score=68, Evalue=5e-12, Organism=Drosophila melanogaster, GI116007236, Length=200, Percent_Identity=27.5, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24640442, Length=206, Percent_Identity=30.5825242718447, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI116007234, Length=210, Percent_Identity=30, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 25408; Mature: 25277
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAVEQRLAGRRALVTGGSRGIGAEIVRRLAFEGAAVAFTYGSSVSDADKVVVDVSRGG CCHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCC GRVLPIRADSSDAGQIASAVDETVTRLGGLDILVNNAGVAHLGAVESFPLDQFDRLVAVN CEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCHHHHCCEEEEE VRGVFVAIQCAVPHLGDGGRIINIGSVNADRVPSPGLSVYAMTKAAVAGLTRGLARELGP ECEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCC RGITVNTVAPGPIATDMNPAEGEFADAAREIIAVGHYGNPTDVAGVASYLAGPDAGYVTG CCEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCEEEC ANWTVDGGFTA CCEEECCCCCC >Mature Secondary Structure TAAVEQRLAGRRALVTGGSRGIGAEIVRRLAFEGAAVAFTYGSSVSDADKVVVDVSRGG CHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEEECCC GRVLPIRADSSDAGQIASAVDETVTRLGGLDILVNNAGVAHLGAVESFPLDQFDRLVAVN CEEEEEECCCCCHHHHHHHHHHHHHHHCCEEEEEECCCEEEECCCCCCCHHHHCCEEEEE VRGVFVAIQCAVPHLGDGGRIINIGSVNADRVPSPGLSVYAMTKAAVAGLTRGLARELGP ECEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCC RGITVNTVAPGPIATDMNPAEGEFADAAREIIAVGHYGNPTDVAGVASYLAGPDAGYVTG CCEEEEEECCCCCCCCCCCCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHCCCCCCEEEC ANWTVDGGFTA CCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]