| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is kasA [H]
Identifier: 119869460
GI number: 119869460
Start: 3594833
End: 3596083
Strand: Direct
Name: kasA [H]
Synonym: Mkms_3428
Alternate gene names: 119869460
Gene position: 3594833-3596083 (Clockwise)
Preceding gene: 119869459
Following gene: 119869461
Centisome position: 62.66
GC content: 68.59
Gene sequence:
>1251_bases GTGACCAGGCCTTCCACTGCTAACGGCGGTTTCCCGAGCGTCGTGGTGACTGCCGTCGAGGCCACCACGTCGCTCGCCGC GGACATCGAGAGCACGTGGAAGGGCCTGCTGGCTGGCGAGAGCGGCATCCGCGTTCTCGAAGACGACTTCGTCACCAAGT GGGACCTGCCCGTGCGGATCGGCGGTCATCTCGTCGACAACGTCGACGACCACATGACCCGCATCGACATGCGTCGCATG TCGTACGTGCAGCGCATGTCCAAGCTGGTCTCGGGTCGCCTGTGGGAGACCGCGGGCAGGCCCGAGGTCGATCCGGACCG GTTCGCCGTGATCATCGGCACCGGTCTGGGCGGCGGCGAGAAGATCGTCGAGACCTACGACGCGATGAACGAGGGCGGCC CCCGCAAGGTGTCGCCGCTCGCGGTCCAGATGATCATGCCGAACGGTGCGGCGGCCGTCGCCGGTCTGGAACTGGGCGCC CGCGCCGGGGTCATCACCCCGGTGTCGGCCTGCTCGTCCGGCTCGGAGGCGATCGCGCACGGCTGGCGTCAGATCGTCAT GGGTGACGCGGACTTCGCCGTCGTCGGCGGCGTGGAGGGCGGCATCGAGGCGCTGCCCATCGCGGCGTTCTCGATGATGC GCGCCATGTCGACCCGCAACGACGACCCCGCCGGGGCGTCGCGGCCGTTCGACAAGAACCGCGACGGGTTCGTGTTCGGC GAAGCCGGGGCGATGATGATCATCGAGACCGAGGAGCATGCCCTGGCCCGCGGCGCCAAGCCGTTGGCCCGCCTCATGGG CGCGGGCATCACCAGCGACGCGTTCCACATGGTGGCCCCGGCCGCGGACGGTCTTCGGGCCGGCCACGCGATGAAGCGTG CGATGGAGACTGCGGGGATCGATCCCAAGGACGTCAACCACGTCAACGCACACGCCACCGCGACGCCGATCGGTGACACG GCCGAGGCCAACGCCATCCGGGTCGCCGGTGTGGAGCACGCCGCGGTGTACGCGCCGAAGTCGGCGCTCGGCCACTCCAT CGGGGCGGTCGGTGCGCTCGAGTCGATCCTCACGGTGCTCGCACTGCGTGACGGCGTCATCCCGCCGACACTGAACTACG AGACACCGGACCCCGAGATCGATCTCGATGTCGTTGCGGGCGAGCCACGGTATGGCGACTACCAGTACGCCATCAACAAC TCGTTCGGATTCGGCGGCCACAATGTGGCCTTGGCGTTCGGTCGTTACTGA
Upstream 100 bases:
>100_bases TCGCCGGTCTGCGCACCGTCGGTGACGTGGTCGCCTACATCCAGAAGCTCGAGGAAGAGAACCCCGAAGCTGCCGCCGCT CTCCGCGATAAGTTCTCGCA
Downstream 100 bases:
>100_bases GTAGCGCACGACCAACGGAAAGACACATACGGAGCAGTAATGGCACGGTTAACCAGGCTTTCGACGGGGAACGGTTTCCC CAACGTGGTCGTCACGGGAG
Product: 3-oxoacyl-(acyl carrier protein) synthase II
Products: NA
Alternate protein names: Beta-ketoacyl-ACP synthase 1; KAS 1 [H]
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MTRPSTANGGFPSVVVTAVEATTSLAADIESTWKGLLAGESGIRVLEDDFVTKWDLPVRIGGHLVDNVDDHMTRIDMRRM SYVQRMSKLVSGRLWETAGRPEVDPDRFAVIIGTGLGGGEKIVETYDAMNEGGPRKVSPLAVQMIMPNGAAAVAGLELGA RAGVITPVSACSSGSEAIAHGWRQIVMGDADFAVVGGVEGGIEALPIAAFSMMRAMSTRNDDPAGASRPFDKNRDGFVFG EAGAMMIIETEEHALARGAKPLARLMGAGITSDAFHMVAPAADGLRAGHAMKRAMETAGIDPKDVNHVNAHATATPIGDT AEANAIRVAGVEHAAVYAPKSALGHSIGAVGALESILTVLALRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYQYAINN SFGFGGHNVALAFGRY
Sequences:
>Translated_416_residues MTRPSTANGGFPSVVVTAVEATTSLAADIESTWKGLLAGESGIRVLEDDFVTKWDLPVRIGGHLVDNVDDHMTRIDMRRM SYVQRMSKLVSGRLWETAGRPEVDPDRFAVIIGTGLGGGEKIVETYDAMNEGGPRKVSPLAVQMIMPNGAAAVAGLELGA RAGVITPVSACSSGSEAIAHGWRQIVMGDADFAVVGGVEGGIEALPIAAFSMMRAMSTRNDDPAGASRPFDKNRDGFVFG EAGAMMIIETEEHALARGAKPLARLMGAGITSDAFHMVAPAADGLRAGHAMKRAMETAGIDPKDVNHVNAHATATPIGDT AEANAIRVAGVEHAAVYAPKSALGHSIGAVGALESILTVLALRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYQYAINN SFGFGGHNVALAFGRY >Mature_415_residues TRPSTANGGFPSVVVTAVEATTSLAADIESTWKGLLAGESGIRVLEDDFVTKWDLPVRIGGHLVDNVDDHMTRIDMRRMS YVQRMSKLVSGRLWETAGRPEVDPDRFAVIIGTGLGGGEKIVETYDAMNEGGPRKVSPLAVQMIMPNGAAAVAGLELGAR AGVITPVSACSSGSEAIAHGWRQIVMGDADFAVVGGVEGGIEALPIAAFSMMRAMSTRNDDPAGASRPFDKNRDGFVFGE AGAMMIIETEEHALARGAKPLARLMGAGITSDAFHMVAPAADGLRAGHAMKRAMETAGIDPKDVNHVNAHATATPIGDTA EANAIRVAGVEHAAVYAPKSALGHSIGAVGALESILTVLALRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYQYAINNS FGFGGHNVALAFGRY
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP [H]
COG id: COG0304
COG function: function code IQ; 3-oxoacyl-(acyl-carrier-protein) synthase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the beta-ketoacyl-ACP synthases family [H]
Homologues:
Organism=Homo sapiens, GI8923559, Length=415, Percent_Identity=35.6626506024096, Blast_Score=224, Evalue=1e-58, Organism=Homo sapiens, GI223972627, Length=146, Percent_Identity=42.4657534246575, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI41872631, Length=254, Percent_Identity=27.9527559055118, Blast_Score=82, Evalue=1e-15, Organism=Escherichia coli, GI1787337, Length=409, Percent_Identity=41.320293398533, Blast_Score=259, Evalue=2e-70, Organism=Escherichia coli, GI1788663, Length=404, Percent_Identity=33.1683168316832, Blast_Score=165, Evalue=6e-42, Organism=Caenorhabditis elegans, GI71983541, Length=411, Percent_Identity=34.5498783454988, Blast_Score=217, Evalue=8e-57, Organism=Caenorhabditis elegans, GI71983535, Length=262, Percent_Identity=38.9312977099237, Blast_Score=179, Evalue=3e-45, Organism=Caenorhabditis elegans, GI212642053, Length=254, Percent_Identity=31.1023622047244, Blast_Score=86, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17550940, Length=272, Percent_Identity=25.3676470588235, Blast_Score=80, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6320904, Length=441, Percent_Identity=31.5192743764172, Blast_Score=204, Evalue=3e-53, Organism=Drosophila melanogaster, GI24644341, Length=434, Percent_Identity=38.4792626728111, Blast_Score=256, Evalue=2e-68, Organism=Drosophila melanogaster, GI24581345, Length=252, Percent_Identity=27.7777777777778, Blast_Score=92, Evalue=7e-19, Organism=Drosophila melanogaster, GI221330659, Length=256, Percent_Identity=26.953125, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI19920632, Length=256, Percent_Identity=26.953125, Blast_Score=82, Evalue=8e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000794 - InterPro: IPR014031 - InterPro: IPR014030 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF00109 ketoacyl-synt; PF02801 Ketoacyl-synt_C [H]
EC number: =2.3.1.41 [H]
Molecular weight: Translated: 43560; Mature: 43429
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPSTANGGFPSVVVTAVEATTSLAADIESTWKGLLAGESGIRVLEDDFVTKWDLPVRI CCCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCEEE GGHLVDNVDDHMTRIDMRRMSYVQRMSKLVSGRLWETAGRPEVDPDRFAVIIGTGLGGGE CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCH KIVETYDAMNEGGPRKVSPLAVQMIMPNGAAAVAGLELGARAGVITPVSACSSGSEAIAH HHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHCCCCCHHHHH GWRQIVMGDADFAVVGGVEGGIEALPIAAFSMMRAMSTRNDDPAGASRPFDKNRDGFVFG HHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE EAGAMMIIETEEHALARGAKPLARLMGAGITSDAFHMVAPAADGLRAGHAMKRAMETAGI CCCEEEEEECCHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC DPKDVNHVNAHATATPIGDTAEANAIRVAGVEHAAVYAPKSALGHSIGAVGALESILTVL CCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHH ALRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYQYAINNSFGFGGHNVALAFGRY HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCC >Mature Secondary Structure TRPSTANGGFPSVVVTAVEATTSLAADIESTWKGLLAGESGIRVLEDDFVTKWDLPVRI CCCCCCCCCCCHHEEEHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEECCCEEE GGHLVDNVDDHMTRIDMRRMSYVQRMSKLVSGRLWETAGRPEVDPDRFAVIIGTGLGGGE CCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCH KIVETYDAMNEGGPRKVSPLAVQMIMPNGAAAVAGLELGARAGVITPVSACSSGSEAIAH HHHHHHHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHCCCCCHHHHH GWRQIVMGDADFAVVGGVEGGIEALPIAAFSMMRAMSTRNDDPAGASRPFDKNRDGFVFG HHHHEEECCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE EAGAMMIIETEEHALARGAKPLARLMGAGITSDAFHMVAPAADGLRAGHAMKRAMETAGI CCCEEEEEECCHHHHHHCCHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHCCC DPKDVNHVNAHATATPIGDTAEANAIRVAGVEHAAVYAPKSALGHSIGAVGALESILTVL CCCCCCCCCCCCEECCCCCCCCCCEEEEECCCHHEEECCHHHHHHHHHHHHHHHHHHHHH ALRDGVIPPTLNYETPDPEIDLDVVAGEPRYGDYQYAINNSFGFGGHNVALAFGRY HHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]