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The map label for this gene is yfcH [C]

Identifier: 119869408

GI number: 119869408

Start: 3540205

End: 3541143

Strand: Direct

Name: yfcH [C]

Synonym: Mkms_3376

Alternate gene names: 119869408

Gene position: 3540205-3541143 (Clockwise)

Preceding gene: 119869407

Following gene: 119869409

Centisome position: 61.71

GC content: 72.52

Gene sequence:

>939_bases
GTGTCCACCGGAGCCGGGGGGCCGGCGACATCAGGCGGAGCTGTGATCGCGATAGCGGGGTCCTCGGGCCTCATCGGTTC
GGCGTTGGTGTCTGCGCTGCGCGCCGAGAACCGTCGGGTCGTGCGGATCGTGCGCCGCGCACCCTCGAACGCCGACGAGC
TGTTCTGGAACCCGGACAGCGGTGAATTCCATCCTGACGCGCTGCGCGGTGTGGACGCCGTGATCAACCTGTGCGGTGTC
AGCGTCGGTCAGCGCCGCTGGTCGGGGGCGTTCAAGCAGAGCCTGCGCGACAGCCGCATCACCCCCACCGAGGTGCTGGC
CAACGCGGTGGCCGACGCCGGGGTCCCGCTGCTCGTCAACGCCAGCGCGGTCGGCTACTACGGCGACACCCGCGGCCGGG
TCACCGACGAATCCGCCCCCGCGGGAGACGGTTTCCTCGCGCAACTGTGCGTGGACTGGGAGGCCGCGACGGCGGCGGCG
GCCGAGGACGGCGCCCGGGTGGTGCTGCTGCGAACGGGTCTGGTGCTGTCCCCGTCGGGCGGGTTGCTGAGCCGGCTCAA
ACCGCTGTTCGGCCTGGGCCTGGGTGCCCGGCTGGGCAACGGCAGGCAGTACATGCCGTGGATCAGCCTCGAGGATCAGG
TGCGCGCCATGCTGTTCGCCGTCGCGCACGAGGACTTGTCGGGGCCGCTGAACCTGACCGGCCCCGCCCCGGTCACCAAC
GCGGAGTTCACCGCTGCGCTGGGCCGCGCGGTCAACCGGCCCACCCCGCTTACGGTGCCGGGGTTCGCATTGCGCACGGT
GCTCGGCGAGTTCGCCGACGAAGGGCTGCTCGGCGGGCAGCGGGCGATCCCCGCCGCGCTGGAGCGGGCCGGGTTCACGT
TCCACCACAACACCGTCGGCGAAGCGCTCGCCTACGCCACCGGCCCGCGCGACGCCTGA

Upstream 100 bases:

>100_bases
CACCGACTCATCGACGGTGCCGACGCCGGTCGCTTCCTGACCACCATCAAGCGCCGACTCGAAGAGGGTTCGTTCGAGGC
AGACCTGGGTCTGTAACCCG

Downstream 100 bases:

>100_bases
CGAGTAGCGTCGTGTCCATGGCGATTTCGATCAGGTCGTCGACCCGTCCGGTCGAGGTGCGGCGACTGGGCACCGTCGAG
TACCTCGACGCGTGGGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 312; Mature: 311

Protein sequence:

>312_residues
MSTGAGGPATSGGAVIAIAGSSGLIGSALVSALRAENRRVVRIVRRAPSNADELFWNPDSGEFHPDALRGVDAVINLCGV
SVGQRRWSGAFKQSLRDSRITPTEVLANAVADAGVPLLVNASAVGYYGDTRGRVTDESAPAGDGFLAQLCVDWEAATAAA
AEDGARVVLLRTGLVLSPSGGLLSRLKPLFGLGLGARLGNGRQYMPWISLEDQVRAMLFAVAHEDLSGPLNLTGPAPVTN
AEFTAALGRAVNRPTPLTVPGFALRTVLGEFADEGLLGGQRAIPAALERAGFTFHHNTVGEALAYATGPRDA

Sequences:

>Translated_312_residues
MSTGAGGPATSGGAVIAIAGSSGLIGSALVSALRAENRRVVRIVRRAPSNADELFWNPDSGEFHPDALRGVDAVINLCGV
SVGQRRWSGAFKQSLRDSRITPTEVLANAVADAGVPLLVNASAVGYYGDTRGRVTDESAPAGDGFLAQLCVDWEAATAAA
AEDGARVVLLRTGLVLSPSGGLLSRLKPLFGLGLGARLGNGRQYMPWISLEDQVRAMLFAVAHEDLSGPLNLTGPAPVTN
AEFTAALGRAVNRPTPLTVPGFALRTVLGEFADEGLLGGQRAIPAALERAGFTFHHNTVGEALAYATGPRDA
>Mature_311_residues
STGAGGPATSGGAVIAIAGSSGLIGSALVSALRAENRRVVRIVRRAPSNADELFWNPDSGEFHPDALRGVDAVINLCGVS
VGQRRWSGAFKQSLRDSRITPTEVLANAVADAGVPLLVNASAVGYYGDTRGRVTDESAPAGDGFLAQLCVDWEAATAAAA
EDGARVVLLRTGLVLSPSGGLLSRLKPLFGLGLGARLGNGRQYMPWISLEDQVRAMLFAVAHEDLSGPLNLTGPAPVTNA
EFTAALGRAVNRPTPLTVPGFALRTVLGEFADEGLLGGQRAIPAALERAGFTFHHNTVGEALAYATGPRDA

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=293, Percent_Identity=32.0819112627986, Blast_Score=134, Evalue=1e-31,
Organism=Escherichia coli, GI1788642, Length=297, Percent_Identity=40.7407407407407, Blast_Score=205, Evalue=4e-54,
Organism=Drosophila melanogaster, GI28573846, Length=295, Percent_Identity=30.5084745762712, Blast_Score=143, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 32217; Mature: 32086

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTGAGGPATSGGAVIAIAGSSGLIGSALVSALRAENRRVVRIVRRAPSNADELFWNPDS
CCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEECCCC
GEFHPDALRGVDAVINLCGVSVGQRRWSGAFKQSLRDSRITPTEVLANAVADAGVPLLVN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
ASAVGYYGDTRGRVTDESAPAGDGFLAQLCVDWEAATAAAAEDGARVVLLRTGLVLSPSG
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCEEEEEECCEEECCCC
GLLSRLKPLFGLGLGARLGNGRQYMPWISLEDQVRAMLFAVAHEDLSGPLNLTGPAPVTN
CHHHHHHHHHHCCCCCEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
AEFTAALGRAVNRPTPLTVPGFALRTVLGEFADEGLLGGQRAIPAALERAGFTFHHNTVG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCHHH
EALAYATGPRDA
HHHHHCCCCCCC
>Mature Secondary Structure 
STGAGGPATSGGAVIAIAGSSGLIGSALVSALRAENRRVVRIVRRAPSNADELFWNPDS
CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHEEECCCC
GEFHPDALRGVDAVINLCGVSVGQRRWSGAFKQSLRDSRITPTEVLANAVADAGVPLLVN
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEE
ASAVGYYGDTRGRVTDESAPAGDGFLAQLCVDWEAATAAAAEDGARVVLLRTGLVLSPSG
CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHCCCCEEEEEECCEEECCCC
GLLSRLKPLFGLGLGARLGNGRQYMPWISLEDQVRAMLFAVAHEDLSGPLNLTGPAPVTN
CHHHHHHHHHHCCCCCEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCC
AEFTAALGRAVNRPTPLTVPGFALRTVLGEFADEGLLGGQRAIPAALERAGFTFHHNTVG
CHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCEEECCHHH
EALAYATGPRDA
HHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]