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The map label for this gene is cdaR [C]

Identifier: 119869378

GI number: 119869378

Start: 3508632

End: 3510110

Strand: Direct

Name: cdaR [C]

Synonym: Mkms_3346

Alternate gene names: 119869378

Gene position: 3508632-3510110 (Clockwise)

Preceding gene: 119869376

Following gene: 119869383

Centisome position: 61.16

GC content: 69.51

Gene sequence:

>1479_bases
ATGCCCCACCTCGGTCTCGGCGTGCTGTCGGGGGCGGCCGGCCTGGACCGGGCGGTGTCCTGGACCCACACCTCGGACCT
GCCCGAACCCTGGCGCTGGATCACCGGCGGTGAACTGCTGATGACGAACGGCCTGTCGTTTCCGAAATCGGCCGCCGACC
AGGAGACGCTGCTCACCCGCCTCGACGAATCCGGGGTGGCGGGCCTGGCGATCGGCGACAAGATGTACTGCCCGCGGTTG
ACGCAGCGGTTCACCCGCTGCAGCGACCGGCTGGGCTTCCCCGTTCTGCAGATCCGTTATCCCCTACCGTTCGTGGCGAT
TTCGCGGGCGGTCGCCGAAGCGACGTTGCTCGATCAGTCCAGCCGGTTGTCCCGCACCGTGCGGATCTACGATCTGCTGC
GCCGCCACATCGGAAGCGCCTCCAGCTCAGCAGATCTCGTCGCAGCGCTGGCGCGGGAGCTGGGTTGCGAGCTGCACGTC
TGCGACCGCCGCACCGGCGACCCCTGGTTTCCGCAGACGCCGCCACTCGACCCGGTGCTGCGGCAGGCGGTCGTGGGACT
GTCGGACTCGTCGACCAACGTGGCGGCTGGAGTGTACGGACTCCCGGGCGATGGTGCGCGACAGGCGATGCTCACCGACA
TCGCGCGCCACCCCGATGTCGCGCTGGTGGTGATCCCGCGCGCCGCCGACCGGGTGGACCCGATTCGCCTGCAGCACATC
GCAACCGTGATCAGCCTCGAACTGTCCGAGGTGCAGTCGGTCCTCGAACACGACCGGCGCGAACGCGCCGCGCTACTGGA
ACGCCTGCTCGAGAACCGCGTCGACCGGCACGCGGTCGAGTCGCGGCTGGGCGAACTGCACCTCGACCCCGCCCGCACCG
TACTCGTCGCGGCCCGCAACAGCGACGAAGCGCGGGCGCTGACCGTTCATAATTCGTTGTGGCGCAACGACATTCCTTAT
CTGTGCACGCTTCGGGAAGGTCTGCTGTACGCACTGGTGCCGGACCGGTCGGGATTCGAGGCCGTGCTGTCGCGGGCGCT
GGGACCGTCGGCGCGGATCGGCGTGAGCGCGCGGCTCGACTCCATCAGCCGGTTCCCCGAGGCGGTCCGCGAAGCCTCGT
GGGCGTGTTCGCTGGCGGGCCGGCGCGGGATCCCGATCTCGCGGTACGGCAGCGAGGAACCGTGGCTGGGCCTGTCGAAC
GTCGGCGATGCGCAGGCCCTCGTCGACCGGGTCCTCACCCCGCTGCGCACCTACGACGAACAGCACCACTCCAATCTGGT
CGCCACACTCGAGGCGTATCTTCGCCACCAGCGGTCGCTGCAGCTGACGGCGACGGCGCTGTGCGTGCACCGCCAGACCG
TGCTCTACCGGATGAAACGCGTCGCGGATCTGACCGGGCTCAACCTCGCCGAAACCGATGCGGTGGCGGCGCTGTGGCTG
GCGTTGCGCGCCGCGGCGCTGCTCGACGCCGAAGATTAG

Upstream 100 bases:

>100_bases
GATGCGTGTCGCGTCGACGTTTGACACAATCCGGCCATGAAGTTTGAGCATCTGCACAAACGGGTCGAGTGTGACGCTCA
CTGTCGCTGACCTCGTCGAG

Downstream 100 bases:

>100_bases
AGCAGTTCGCCGAGCCGCGCCGCACGGGTGGGCCATTGCCAGTTCTCCACGGCCCACTGCCTGCCTGCGGCACCCATCGC
GGCGGCCCGGTCGGGGTCGG

Product: purine catabolism PurC domain-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator PucR Family; PucR Family Transcriptional Regulator; Regulatory Protein; Helix-Turn-Helix Fis-Type; Transcription Regulator; Regulator Of Polyketide Synthase Expression; Purine Catabolism Regulatory Protein; LigA Protein; Peptidase; Transcriptional Regulator; Transcriptional Regulator CdaR; Purine Catabolism PurC Domain-Containing Protein; Purine Catabolism PurC-Like Protein; Transcriptional Regulator CdaR Family

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MPHLGLGVLSGAAGLDRAVSWTHTSDLPEPWRWITGGELLMTNGLSFPKSAADQETLLTRLDESGVAGLAIGDKMYCPRL
TQRFTRCSDRLGFPVLQIRYPLPFVAISRAVAEATLLDQSSRLSRTVRIYDLLRRHIGSASSSADLVAALARELGCELHV
CDRRTGDPWFPQTPPLDPVLRQAVVGLSDSSTNVAAGVYGLPGDGARQAMLTDIARHPDVALVVIPRAADRVDPIRLQHI
ATVISLELSEVQSVLEHDRRERAALLERLLENRVDRHAVESRLGELHLDPARTVLVAARNSDEARALTVHNSLWRNDIPY
LCTLREGLLYALVPDRSGFEAVLSRALGPSARIGVSARLDSISRFPEAVREASWACSLAGRRGIPISRYGSEEPWLGLSN
VGDAQALVDRVLTPLRTYDEQHHSNLVATLEAYLRHQRSLQLTATALCVHRQTVLYRMKRVADLTGLNLAETDAVAALWL
ALRAAALLDAED

Sequences:

>Translated_492_residues
MPHLGLGVLSGAAGLDRAVSWTHTSDLPEPWRWITGGELLMTNGLSFPKSAADQETLLTRLDESGVAGLAIGDKMYCPRL
TQRFTRCSDRLGFPVLQIRYPLPFVAISRAVAEATLLDQSSRLSRTVRIYDLLRRHIGSASSSADLVAALARELGCELHV
CDRRTGDPWFPQTPPLDPVLRQAVVGLSDSSTNVAAGVYGLPGDGARQAMLTDIARHPDVALVVIPRAADRVDPIRLQHI
ATVISLELSEVQSVLEHDRRERAALLERLLENRVDRHAVESRLGELHLDPARTVLVAARNSDEARALTVHNSLWRNDIPY
LCTLREGLLYALVPDRSGFEAVLSRALGPSARIGVSARLDSISRFPEAVREASWACSLAGRRGIPISRYGSEEPWLGLSN
VGDAQALVDRVLTPLRTYDEQHHSNLVATLEAYLRHQRSLQLTATALCVHRQTVLYRMKRVADLTGLNLAETDAVAALWL
ALRAAALLDAED
>Mature_491_residues
PHLGLGVLSGAAGLDRAVSWTHTSDLPEPWRWITGGELLMTNGLSFPKSAADQETLLTRLDESGVAGLAIGDKMYCPRLT
QRFTRCSDRLGFPVLQIRYPLPFVAISRAVAEATLLDQSSRLSRTVRIYDLLRRHIGSASSSADLVAALARELGCELHVC
DRRTGDPWFPQTPPLDPVLRQAVVGLSDSSTNVAAGVYGLPGDGARQAMLTDIARHPDVALVVIPRAADRVDPIRLQHIA
TVISLELSEVQSVLEHDRRERAALLERLLENRVDRHAVESRLGELHLDPARTVLVAARNSDEARALTVHNSLWRNDIPYL
CTLREGLLYALVPDRSGFEAVLSRALGPSARIGVSARLDSISRFPEAVREASWACSLAGRRGIPISRYGSEEPWLGLSNV
GDAQALVDRVLTPLRTYDEQHHSNLVATLEAYLRHQRSLQLTATALCVHRQTVLYRMKRVADLTGLNLAETDAVAALWLA
LRAAALLDAED

Specific function: Seems To Regulate The Expression Of The Operons For The Enzymes Involved In D-Galactarate, D-Glucarate And D-Glycerate Utilization. [C]

COG id: COG2508

COG function: function code TQ; Regulator of polyketide synthase expression

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53970; Mature: 53839

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPHLGLGVLSGAAGLDRAVSWTHTSDLPEPWRWITGGELLMTNGLSFPKSAADQETLLTR
CCCCCCHHHHCCCCHHHCEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHH
LDESGVAGLAIGDKMYCPRLTQRFTRCSDRLGFPVLQIRYPLPFVAISRAVAEATLLDQS
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCH
SRLSRTVRIYDLLRRHIGSASSSADLVAALARELGCELHVCDRRTGDPWFPQTPPLDPVL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHH
RQAVVGLSDSSTNVAAGVYGLPGDGARQAMLTDIARHPDVALVVIPRAADRVDPIRLQHI
HHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH
ATVISLELSEVQSVLEHDRRERAALLERLLENRVDRHAVESRLGELHLDPARTVLVAARN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
SDEARALTVHNSLWRNDIPYLCTLREGLLYALVPDRSGFEAVLSRALGPSARIGVSARLD
CCCCEEEEEHHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHH
SISRFPEAVREASWACSLAGRRGIPISRYGSEEPWLGLSNVGDAQALVDRVLTPLRTYDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QHHSNLVATLEAYLRHQRSLQLTATALCVHRQTVLYRMKRVADLTGLNLAETDAVAALWL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALRAAALLDAED
HHHHHHHHCCCC
>Mature Secondary Structure 
PHLGLGVLSGAAGLDRAVSWTHTSDLPEPWRWITGGELLMTNGLSFPKSAADQETLLTR
CCCCCHHHHCCCCHHHCEECCCCCCCCCCCEECCCCCEEEECCCCCCCCCCHHHHHHHH
LDESGVAGLAIGDKMYCPRLTQRFTRCSDRLGFPVLQIRYPLPFVAISRAVAEATLLDQS
HCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCH
SRLSRTVRIYDLLRRHIGSASSSADLVAALARELGCELHVCDRRTGDPWFPQTPPLDPVL
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCHHH
RQAVVGLSDSSTNVAAGVYGLPGDGARQAMLTDIARHPDVALVVIPRAADRVDPIRLQHI
HHHHHCCCCCCCCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHH
ATVISLELSEVQSVLEHDRRERAALLERLLENRVDRHAVESRLGELHLDPARTVLVAARN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
SDEARALTVHNSLWRNDIPYLCTLREGLLYALVPDRSGFEAVLSRALGPSARIGVSARLD
CCCCEEEEEHHHHHHCCCCEEEECCCCCEEEECCCCCCHHHHHHHHCCCCCCCCHHHHHH
SISRFPEAVREASWACSLAGRRGIPISRYGSEEPWLGLSNVGDAQALVDRVLTPLRTYDE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
QHHSNLVATLEAYLRHQRSLQLTATALCVHRQTVLYRMKRVADLTGLNLAETDAVAALWL
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
ALRAAALLDAED
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA