| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119868828
Identifier: 119868828
GI number: 119868828
Start: 2915273
End: 2917069
Strand: Direct
Name: 119868828
Synonym: Mkms_2796
Alternate gene names: NA
Gene position: 2915273-2917069 (Clockwise)
Preceding gene: 119868827
Following gene: 119868829
Centisome position: 50.81
GC content: 68.17
Gene sequence:
>1797_bases ATGACAGTCGTGACCTACGACACGATCATCGCCAACGGCCGCTGGTTCGATGGCACAGGGGCGCCGTCGGCGATCCGCAA CATCGGCATCCGTGACGGCCATGTCGTCACCGTCACGCAGGAGGACCTCGACGCCGCGGGCTGCCCCGAGATCATCGACG CCGCCGGCAAGTGGGTGATCCCCGGCATGCTCGACATCCACACCCACTACGACATCGAAGTGCTCGAGGGGCCGGCGCTC ACGGAGTCCCTGCGTCACGGCGTGACGACGGTGATGCTGGGGTCGTGTTCGCTGTCGACCATCCACGTCGACGGCACCGA CGCCGGCGACCTGTTCGGCCGCGTCGAGGCGATCCCGCGTGAGCATGTCATCGCCGCGGTGGACCGGCACAAGACCTGGA CGACGTGTGAGGAATACGTGAGCGCGCTCGAGTCCCGGCCGCTCGGCCCGAACGTGTGCGCGTTCATCGGGCACAGCGAC ATGCGGACTGCCGTCATGGGTCTCGACCGCGCCACCCGTGGGACCGAACGCCCGACGCGCAGCGAACAGGCCCGGCTGGA GAAGATGCTCGAGGAGGCGCTGGTTGCCGGATTCGTCGGGATGTCGTCGCAACAGCTGCTGTTCGACAAGGTCGACGGCG ACACCTGCCGTTCGCGCACCCTCCCCTCGACCTACGCCAAACCCCGCGAACTGCGCCGCCTCAAAGCGCTGTTGCGGCGC AGCGGACGGGTCCTGCAGTCCGCGCCCGACATCGCGAACCCGCTGAACCTCGGTTCTCAGGTGGCCCAGTCCCTCGGCGT CTTCCGCAATCCGCTGAAGACCAGCCTGCTCTCGGCCGCCGACGTGAAGTCGAACCCGTACGCGATCAAGATCCTCGGCC CGGTCGCCCGCGCGGCCAACCGGCTCGGCGGGAACTTCCGCTGGCAGCATCTGCCCGTACCGTTCGAGGTGTACGCCGAC GGCATCGACCTGGTTGTATTCGAGGAATTCGGATCCGGTGCGGCCGCACTGCACCTGCGCGACGAGGTCGAGCGCAATGC GTTGATGCGCGACGAGGCCTACCGCCGTCGCTTCCGCAAGGACTACGAGAACAAGATGGGCGTGCGGGTGTGGCAGCGCG ACTTCTTCGATGCCGAGATCGTCGAGTGCCCCGACGCCTCGATCGTCGGCAGATCGTTCGGCGAGGTCGGCGTGGAGCGC GGCCTGCACCCCGTCGACGCCTTCCTCGACCTGGTACTCGAGTACGGGCGTGAACTGCGTTGGCGGACCACGATTTCCAA TCACCGGCCCGATGTCCTCAAGAAGCTGGCCCGCGAACCCGGTATCCAGATGGGTTTTTCCGACGCCGGCGCCCACCTGC GCAACATGGCGTTCTACAACATGGGTCTGCGCCTGCTGCGCCATGTGTACGACGCGCAGCAGGCCGGCCGGCCGTTCATG AGCGTCGAGCAGGCGGTGCACCGGCTCACCGGCGAACTCGCCGACTGGTACCGCCTCGACGCCGGCCACCTGCGGGTCGG CGACCGGGCCGACCTCGTGGTGATCGATCCGGCACACCTGGACGCGAGCCTCGACGACTACGCCGAGGACCGCGTCGACT TCTACGGTGGGCTCGAGCGCATGGTCAACCGCAACGACAGCACGGTCAGCGCCGTCCTGGTCAGCGGGCACACGGTGTTC CGCGACGGCTCCCCGACCGGGCTGGTCGGCAAGCAGCGCACCGGGCGGTTCCTGCGCGCCGCCCACCGCGCGCCCGCCGT ACCCGCCTCGACGACGGAGTTCGCCAGTGTCAGTTGA
Upstream 100 bases:
>100_bases GACTCATGGACCGAGTGAACACGCAGTTCAGAGCTGAAATAGACAGATCAGGAAATCTGTTCACTGGAATCGTTGACACC CGCCGCACCGGGACTGTTCT
Downstream 100 bases:
>100_bases CGATACGGTGCTCGGGCTGTGGAAGGCGTTGTCCGCCCGGGACTGGGACGCGGTGAAGACCCATCTGAGCGACGACTGCA TCTACGCCGACATGCCCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 597
Protein sequence:
>598_residues MTVVTYDTIIANGRWFDGTGAPSAIRNIGIRDGHVVTVTQEDLDAAGCPEIIDAAGKWVIPGMLDIHTHYDIEVLEGPAL TESLRHGVTTVMLGSCSLSTIHVDGTDAGDLFGRVEAIPREHVIAAVDRHKTWTTCEEYVSALESRPLGPNVCAFIGHSD MRTAVMGLDRATRGTERPTRSEQARLEKMLEEALVAGFVGMSSQQLLFDKVDGDTCRSRTLPSTYAKPRELRRLKALLRR SGRVLQSAPDIANPLNLGSQVAQSLGVFRNPLKTSLLSAADVKSNPYAIKILGPVARAANRLGGNFRWQHLPVPFEVYAD GIDLVVFEEFGSGAAALHLRDEVERNALMRDEAYRRRFRKDYENKMGVRVWQRDFFDAEIVECPDASIVGRSFGEVGVER GLHPVDAFLDLVLEYGRELRWRTTISNHRPDVLKKLAREPGIQMGFSDAGAHLRNMAFYNMGLRLLRHVYDAQQAGRPFM SVEQAVHRLTGELADWYRLDAGHLRVGDRADLVVIDPAHLDASLDDYAEDRVDFYGGLERMVNRNDSTVSAVLVSGHTVF RDGSPTGLVGKQRTGRFLRAAHRAPAVPASTTEFASVS
Sequences:
>Translated_598_residues MTVVTYDTIIANGRWFDGTGAPSAIRNIGIRDGHVVTVTQEDLDAAGCPEIIDAAGKWVIPGMLDIHTHYDIEVLEGPAL TESLRHGVTTVMLGSCSLSTIHVDGTDAGDLFGRVEAIPREHVIAAVDRHKTWTTCEEYVSALESRPLGPNVCAFIGHSD MRTAVMGLDRATRGTERPTRSEQARLEKMLEEALVAGFVGMSSQQLLFDKVDGDTCRSRTLPSTYAKPRELRRLKALLRR SGRVLQSAPDIANPLNLGSQVAQSLGVFRNPLKTSLLSAADVKSNPYAIKILGPVARAANRLGGNFRWQHLPVPFEVYAD GIDLVVFEEFGSGAAALHLRDEVERNALMRDEAYRRRFRKDYENKMGVRVWQRDFFDAEIVECPDASIVGRSFGEVGVER GLHPVDAFLDLVLEYGRELRWRTTISNHRPDVLKKLAREPGIQMGFSDAGAHLRNMAFYNMGLRLLRHVYDAQQAGRPFM SVEQAVHRLTGELADWYRLDAGHLRVGDRADLVVIDPAHLDASLDDYAEDRVDFYGGLERMVNRNDSTVSAVLVSGHTVF RDGSPTGLVGKQRTGRFLRAAHRAPAVPASTTEFASVS >Mature_597_residues TVVTYDTIIANGRWFDGTGAPSAIRNIGIRDGHVVTVTQEDLDAAGCPEIIDAAGKWVIPGMLDIHTHYDIEVLEGPALT ESLRHGVTTVMLGSCSLSTIHVDGTDAGDLFGRVEAIPREHVIAAVDRHKTWTTCEEYVSALESRPLGPNVCAFIGHSDM RTAVMGLDRATRGTERPTRSEQARLEKMLEEALVAGFVGMSSQQLLFDKVDGDTCRSRTLPSTYAKPRELRRLKALLRRS GRVLQSAPDIANPLNLGSQVAQSLGVFRNPLKTSLLSAADVKSNPYAIKILGPVARAANRLGGNFRWQHLPVPFEVYADG IDLVVFEEFGSGAAALHLRDEVERNALMRDEAYRRRFRKDYENKMGVRVWQRDFFDAEIVECPDASIVGRSFGEVGVERG LHPVDAFLDLVLEYGRELRWRTTISNHRPDVLKKLAREPGIQMGFSDAGAHLRNMAFYNMGLRLLRHVYDAQQAGRPFMS VEQAVHRLTGELADWYRLDAGHLRVGDRADLVVIDPAHLDASLDDYAEDRVDFYGGLERMVNRNDSTVSAVLVSGHTVFR DGSPTGLVGKQRTGRFLRAAHRAPAVPASTTEFASVS
Specific function: Unknown
COG id: COG3653
COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 66093; Mature: 65962
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVVTYDTIIANGRWFDGTGAPSAIRNIGIRDGHVVTVTQEDLDAAGCPEIIDAAGKWVI CEEEEEEHEEECCCEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEC PGMLDIHTHYDIEVLEGPALTESLRHGVTTVMLGSCSLSTIHVDGTDAGDLFGRVEAIPR CCEEEECCCCCEEEECCCHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCH EHVIAAVDRHKTWTTCEEYVSALESRPLGPNVCAFIGHSDMRTAVMGLDRATRGTERPTR HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC SEQARLEKMLEEALVAGFVGMSSQQLLFDKVDGDTCRSRTLPSTYAKPRELRRLKALLRR HHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHH SGRVLQSAPDIANPLNLGSQVAQSLGVFRNPLKTSLLSAADVKSNPYAIKILGPVARAAN CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH RLGGNFRWQHLPVPFEVYADGIDLVVFEEFGSGAAALHLRDEVERNALMRDEAYRRRFRK HCCCCCEEEECCCCHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH DYENKMGVRVWQRDFFDAEIVECPDASIVGRSFGEVGVERGLHPVDAFLDLVLEYGRELR HHHHCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE WRTTISNHRPDVLKKLAREPGIQMGFSDAGAHLRNMAFYNMGLRLLRHVYDAQQAGRPFM EEECCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SVEQAVHRLTGELADWYRLDAGHLRVGDRADLVVIDPAHLDASLDDYAEDRVDFYGGLER HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHCCCCHHHHHHHHHHHHHHHHH MVNRNDSTVSAVLVSGHTVFRDGSPTGLVGKQRTGRFLRAAHRAPAVPASTTEFASVS HHCCCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TVVTYDTIIANGRWFDGTGAPSAIRNIGIRDGHVVTVTQEDLDAAGCPEIIDAAGKWVI EEEEEEHEEECCCEECCCCCCHHHHHCCCCCCEEEEEECCCCCCCCCCHHHHCCCCEEC PGMLDIHTHYDIEVLEGPALTESLRHGVTTVMLGSCSLSTIHVDGTDAGDLFGRVEAIPR CCEEEECCCCCEEEECCCHHHHHHHCCCCEEEEECCCEEEEEECCCCHHHHHHHHHHCCH EHVIAAVDRHKTWTTCEEYVSALESRPLGPNVCAFIGHSDMRTAVMGLDRATRGTERPTR HHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCCCCC SEQARLEKMLEEALVAGFVGMSSQQLLFDKVDGDTCRSRTLPSTYAKPRELRRLKALLRR HHHHHHHHHHHHHHHHHHHCCCCCHHHEECCCCCHHHCCCCCHHHCCHHHHHHHHHHHHH SGRVLQSAPDIANPLNLGSQVAQSLGVFRNPLKTSLLSAADVKSNPYAIKILGPVARAAN CCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH RLGGNFRWQHLPVPFEVYADGIDLVVFEEFGSGAAALHLRDEVERNALMRDEAYRRRFRK HCCCCCEEEECCCCHHHHCCCEEEEEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHH DYENKMGVRVWQRDFFDAEIVECPDASIVGRSFGEVGVERGLHPVDAFLDLVLEYGRELR HHHHCCCHHHHHHHCCCCHHCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEE WRTTISNHRPDVLKKLAREPGIQMGFSDAGAHLRNMAFYNMGLRLLRHVYDAQQAGRPFM EEECCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH SVEQAVHRLTGELADWYRLDAGHLRVGDRADLVVIDPAHLDASLDDYAEDRVDFYGGLER HHHHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEECHHHCCCCHHHHHHHHHHHHHHHHH MVNRNDSTVSAVLVSGHTVFRDGSPTGLVGKQRTGRFLRAAHRAPAVPASTTEFASVS HHCCCCCCEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]