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The map label for this gene is rpiB [H]

Identifier: 119868641

GI number: 119868641

Start: 2741379

End: 2741858

Strand: Direct

Name: rpiB [H]

Synonym: Mkms_2606

Alternate gene names: 119868641

Gene position: 2741379-2741858 (Clockwise)

Preceding gene: 119868640

Following gene: 119868643

Centisome position: 47.78

GC content: 66.67

Gene sequence:

>480_bases
ATGACGGCGCAACAGACGTCCAAACTCCGCATCGTCGTCGGATCCGACGACGCCGGCTACGAATACAAGGAAGCCCTCAA
GGGGGACCTGAAAGCAGACGACCGCGTCGCCGAGGTCACCGACGTCGGTGTGGGCACCGACGAGGACACGGCCTATCCGC
ACATCGCGGTCGCGGCGGCCCGGATGGTCGCCGACGGCAAGGCCGACCGTGCCCTGCTGGTGTGCGGTACCGGTCTCGGC
GTGGCCATCAGCGCGAACAAGGTGCCGGGCATCCGTGCGGTCACCGCCCACGACAGTTTCTCCGTCGAACGGTCGGTGCT
GTCCAACGACGCCCAGGTGCTCTGCTTCGGACAGCGGGTCATCGGACTCGAGTTGGCTCGCCGTCTGGCCCGCGAATGGC
TGAACTACGAGTTCGACCCGGCCAGTAAGTCCGCGGACAAGGTGGAGGCGATCTGCGGGTACGAACCGCGCACCGACTGA

Upstream 100 bases:

>100_bases
CCGAACGCAGCATCGGGACCCCCGACGCCGGCGCGACCTCGCTGGCGATGTGCGCGCGCACGGTCGCCGAAAGCCTCAGC
GTGAAAGGGGACAGTCGGCA

Downstream 100 bases:

>100_bases
GGTCCGCGGCGGCCGTCAGTTGAAGGTCAGCGGGTCGGCGACGGCGAAGCAGCGCTGGGTGCTGGTCATGATGAGCACCT
CGTCCACGGCGTCGGCGTCG

Product: ribose 5-phosphate isomerase

Products: NA

Alternate protein names: Phosphoriboisomerase B [H]

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MTAQQTSKLRIVVGSDDAGYEYKEALKGDLKADDRVAEVTDVGVGTDEDTAYPHIAVAAARMVADGKADRALLVCGTGLG
VAISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCFGQRVIGLELARRLAREWLNYEFDPASKSADKVEAICGYEPRTD

Sequences:

>Translated_159_residues
MTAQQTSKLRIVVGSDDAGYEYKEALKGDLKADDRVAEVTDVGVGTDEDTAYPHIAVAAARMVADGKADRALLVCGTGLG
VAISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCFGQRVIGLELARRLAREWLNYEFDPASKSADKVEAICGYEPRTD
>Mature_158_residues
TAQQTSKLRIVVGSDDAGYEYKEALKGDLKADDRVAEVTDVGVGTDEDTAYPHIAVAAARMVADGKADRALLVCGTGLGV
AISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCFGQRVIGLELARRLAREWLNYEFDPASKSADKVEAICGYEPRTD

Specific function: In addition to its activity on D-ribose 5-phosphate it probably also has activity on D-allose 6-phosphate [H]

COG id: COG0698

COG function: function code G; Ribose 5-phosphate isomerase RpiB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lacAB/rpiB family [H]

Homologues:

Organism=Escherichia coli, GI1790528, Length=150, Percent_Identity=40, Blast_Score=110, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003500
- InterPro:   IPR004785 [H]

Pfam domain/function: PF02502 LacAB_rpiB [H]

EC number: =5.3.1.6 [H]

Molecular weight: Translated: 17003; Mature: 16872

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAQQTSKLRIVVGSDDAGYEYKEALKGDLKADDRVAEVTDVGVGTDEDTAYPHIAVAAA
CCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCEEHHEECCCCCCCCCCCCHHHHHHH
RMVADGKADRALLVCGTGLGVAISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCFGQRV
HHHHCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHH
IGLELARRLAREWLNYEFDPASKSADKVEAICGYEPRTD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TAQQTSKLRIVVGSDDAGYEYKEALKGDLKADDRVAEVTDVGVGTDEDTAYPHIAVAAA
CCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCEEHHEECCCCCCCCCCCCHHHHHHH
RMVADGKADRALLVCGTGLGVAISANKVPGIRAVTAHDSFSVERSVLSNDAQVLCFGQRV
HHHHCCCCCCEEEEEECCCEEEEECCCCCCEEEEECCCCCHHHHHHHCCCCEEEEECCHH
IGLELARRLAREWLNYEFDPASKSADKVEAICGYEPRTD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8576032; 7610040; 9278503; 1840580; 7984428; 9401019 [H]