Click here to switch to the map view.

The map label for this gene is ugpA [C]

Identifier: 119868499

GI number: 119868499

Start: 2587255

End: 2588115

Strand: Reverse

Name: ugpA [C]

Synonym: Mkms_2464

Alternate gene names: 119868499

Gene position: 2588115-2587255 (Counterclockwise)

Preceding gene: 119868500

Following gene: 119868498

Centisome position: 45.11

GC content: 66.55

Gene sequence:

>861_bases
ATGAGATTCAAGTACGGCATGCTGATGCCGCTGCTCGCCTTGTTCGGCGTGGCCGTCGGATTCCCGCTCTGCTATGCGGC
CTACCTGTCGGTCACCGACTATCGGCTGACCGACCGCCGGGCCCCGGACTTCGTCGGCATCGCGAACTTCGGCTCCGCGC
TCTCGAACTCCGCGTTCTGGGAGGCGTTCGGCACCACCGCGATCTACGTGGTGGTGGCGGTCTCACTGGAACTGGTCATC
GGGTTCTCACTCGCTCTGGCGCTGCACCAGCAGAAGTGGGCCAAGGACCTGTCCCGGGCGATCGTGCTGGCGCCCATGTT
CATCACCCCGATTGCCGTCGGGCTGATCTTCCGGTTCCTGCTCAACGACCAGATCGGCGCCATCCCGGCGCTTTTGCACG
CGGTCGGGACCGACTACGACTTCTTCGGCTCCGGCAAGGCGTTGCTCACCCTGGCATTCATCGACGTGTGGCAGTGGACG
CCGTTCATGGTGCTGCTCATCCTGGCGGGCCTGGAGTCGATGCCCAAACAGCCGATGGAGGCCGCCCGCGTCGACGGCGC
CGGCCCCGTCTACCGGCTGCGGCGGGTCCTGATCCCGATGCTGGCACCGGTGCTGACCGTCGCGGTGCTGCTCCGCGGAC
TCGACGCGCTGCGCGTGTTCGAGTACGTCTACGCCACCACCCGCGGTGGGCCCGGCACCGAGACCCAGACCCTGCAGTAC
TTCATGTATCTCGAGGGCATCCAGTTCTTCCGGCTCGCCCAAGCCAGCGCCATGGCCTTCATCGTGCTGGTGCTGGTGCT
GGCCGTGATCGTCGTCGCCTTCCGCGCGATGGAGCGCAGCCGCGAAAGGACCACCGCCTGA

Upstream 100 bases:

>100_bases
GGCAACAAGAGCGTGGCCGACGCACTGCGCGACGCCCAGGCGGCCGCAGAGCGAATCCAGCAGTGACACAGGGGAATCCG
ACGGTCGCGGGAACGAGAAC

Downstream 100 bases:

>100_bases
TGACCCGGCCGCGTCCCCTCGAGGTCCTGCGCATCGCCGTGCTCACCGCGGCGCTGGTGTTCGTGCTGTTTCCCATCGCC
TGGGTCGCGCTGGCGAGTTT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 286; Mature: 286

Protein sequence:

>286_residues
MRFKYGMLMPLLALFGVAVGFPLCYAAYLSVTDYRLTDRRAPDFVGIANFGSALSNSAFWEAFGTTAIYVVVAVSLELVI
GFSLALALHQQKWAKDLSRAIVLAPMFITPIAVGLIFRFLLNDQIGAIPALLHAVGTDYDFFGSGKALLTLAFIDVWQWT
PFMVLLILAGLESMPKQPMEAARVDGAGPVYRLRRVLIPMLAPVLTVAVLLRGLDALRVFEYVYATTRGGPGTETQTLQY
FMYLEGIQFFRLAQASAMAFIVLVLVLAVIVVAFRAMERSRERTTA

Sequences:

>Translated_286_residues
MRFKYGMLMPLLALFGVAVGFPLCYAAYLSVTDYRLTDRRAPDFVGIANFGSALSNSAFWEAFGTTAIYVVVAVSLELVI
GFSLALALHQQKWAKDLSRAIVLAPMFITPIAVGLIFRFLLNDQIGAIPALLHAVGTDYDFFGSGKALLTLAFIDVWQWT
PFMVLLILAGLESMPKQPMEAARVDGAGPVYRLRRVLIPMLAPVLTVAVLLRGLDALRVFEYVYATTRGGPGTETQTLQY
FMYLEGIQFFRLAQASAMAFIVLVLVLAVIVVAFRAMERSRERTTA
>Mature_286_residues
MRFKYGMLMPLLALFGVAVGFPLCYAAYLSVTDYRLTDRRAPDFVGIANFGSALSNSAFWEAFGTTAIYVVVAVSLELVI
GFSLALALHQQKWAKDLSRAIVLAPMFITPIAVGLIFRFLLNDQIGAIPALLHAVGTDYDFFGSGKALLTLAFIDVWQWT
PFMVLLILAGLESMPKQPMEAARVDGAGPVYRLRRVLIPMLAPVLTVAVLLRGLDALRVFEYVYATTRGGPGTETQTLQY
FMYLEGIQFFRLAQASAMAFIVLVLVLAVIVVAFRAMERSRERTTA

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=244, Percent_Identity=31.9672131147541, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=24.6323529411765, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1790465, Length=272, Percent_Identity=25.3676470588235, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31523; Mature: 31523

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKYGMLMPLLALFGVAVGFPLCYAAYLSVTDYRLTDRRAPDFVGIANFGSALSNSAFW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHCCCHHH
EAFGTTAIYVVVAVSLELVIGFSLALALHQQKWAKDLSRAIVLAPMFITPIAVGLIFRFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNDQIGAIPALLHAVGTDYDFFGSGKALLTLAFIDVWQWTPFMVLLILAGLESMPKQPME
HHCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
AARVDGAGPVYRLRRVLIPMLAPVLTVAVLLRGLDALRVFEYVYATTRGGPGTETQTLQY
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
FMYLEGIQFFRLAQASAMAFIVLVLVLAVIVVAFRAMERSRERTTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]