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The map label for this gene is ycjN [C]

Identifier: 119868500

GI number: 119868500

Start: 2588150

End: 2589481

Strand: Reverse

Name: ycjN [C]

Synonym: Mkms_2465

Alternate gene names: 119868500

Gene position: 2589481-2588150 (Counterclockwise)

Preceding gene: 119868501

Following gene: 119868499

Centisome position: 45.13

GC content: 68.77

Gene sequence:

>1332_bases
ATGAAGATCCCGAAGCTCGGCCGGCGCCCAGCGCGGCGGAAAGCCACGCGCTGGATGCCGGCACTGGCCATGACCGCAGG
ACTCGCTTTGGCCGGCTGCGCCGGATCCGGTGGCTCCGGCGACGAGCAGAGCTCGTCGGGGTTGGGGGACATCCCGACCG
ACACCAACGCAACCGTGCGGGTGCTCATGGAGAACGTGCCCGACACCGACATCGTGCAGGGCATGGTCGGACAGTTCAAC
GAGAAGTACCCCGACATCAAGGTCCAGATCGAGACCATGACGTTCGACCAGATGCGTGACCGCCTGGTGTCGTCGTTCCA
GTCGGCCGAACCCGCCTACGACCTGATCGTCGTCGACAACCCGTGGATGGACGATTTCGCCGCCGCGGGCTTCCTCGAGC
CGCTGAACGACCGGATCTCCTCGACCCCCGACTACCAGCCGGACGACTTCTTCCCGTCGCTGACCGACATCACCGACGTC
GACGGCACGACCTACGGGGTGCCGTTCTACAACTACGCACTGGGCTACATCTACAACAAGCCGGATCTGCAGGCCGCGAA
CCTGCAGGTGCCGACCGACCTCGACGCGCTGGTGTCGACGTCGCAGCGGCTCAAGGCGGGCGACCGCGCCGGTATCGCCA
TGCAGCCGCAGCGCGGGTACAAGATCTTCGAGGAATGGGCGAACTGGCTGTTCGCCGCGGGCGGGTCGATCTACGACGCG
GACGGTAAGCCGACGCTGAACACCGAGCAGGCCGCCCGCGCCCTGGACGCCTACATCGAGACCTACCGCACCGCGGCCCC
GGCCAACAGCCTGAACTGGGGCTTCGACGAGGCCTTCCGCTCGGTCTCCGGCGGCAACGCCGCCTCGATGATCGGCTACA
ACTGGAACCTGCCCGCGCTCAACGACCCCGCCGGGGCGTCGGGTGCGCGCGCCGGACAGTTCGCGTTGGCGCCGATTCCC
GGCGGCAAGTCCGCGCTGGGCCTGTGGAGCTGGGCGATCCCGGCGAACTCGGCGGCTCCGGACGCGGCCTGGGCGTTCAC
GTCCTGGATCACCTCACCCGCCGTCGACGCCCAGCGCGTCGCCGAGGGCGGTGCGGTGACCCGCAAGGGTTCGCTGACCG
ATCCAAAGGTGCTGGCCGACGGGTACGGCGAGGAGTACTACCGCGTCGTCGGTGAGATCCTGGCCGACGCGGCCCCGCTC
TCCCAGGGCCGCGGTGGTGAGGAGATGATCCAGGCCGTGGGAACCGAGCTCAACGACGCGGCGGCGGGCAACAAGAGCGT
GGCCGACGCACTGCGCGACGCCCAGGCGGCCGCAGAGCGAATCCAGCAGTGA

Upstream 100 bases:

>100_bases
GGGGAAGCTCTTTCGGTCAACGGCGGTGCCTACATGGATTGAGCCGGGGCCGCCGACCCGGTGAACTCGATCCAGCCAAC
CCAGTAGGAAGTGAGTACCC

Downstream 100 bases:

>100_bases
CACAGGGGAATCCGACGGTCGCGGGAACGAGAACATGAGATTCAAGTACGGCATGCTGATGCCGCTGCTCGCCTTGTTCG
GCGTGGCCGTCGGATTCCCG

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MKIPKLGRRPARRKATRWMPALAMTAGLALAGCAGSGGSGDEQSSSGLGDIPTDTNATVRVLMENVPDTDIVQGMVGQFN
EKYPDIKVQIETMTFDQMRDRLVSSFQSAEPAYDLIVVDNPWMDDFAAAGFLEPLNDRISSTPDYQPDDFFPSLTDITDV
DGTTYGVPFYNYALGYIYNKPDLQAANLQVPTDLDALVSTSQRLKAGDRAGIAMQPQRGYKIFEEWANWLFAAGGSIYDA
DGKPTLNTEQAARALDAYIETYRTAAPANSLNWGFDEAFRSVSGGNAASMIGYNWNLPALNDPAGASGARAGQFALAPIP
GGKSALGLWSWAIPANSAAPDAAWAFTSWITSPAVDAQRVAEGGAVTRKGSLTDPKVLADGYGEEYYRVVGEILADAAPL
SQGRGGEEMIQAVGTELNDAAAGNKSVADALRDAQAAAERIQQ

Sequences:

>Translated_443_residues
MKIPKLGRRPARRKATRWMPALAMTAGLALAGCAGSGGSGDEQSSSGLGDIPTDTNATVRVLMENVPDTDIVQGMVGQFN
EKYPDIKVQIETMTFDQMRDRLVSSFQSAEPAYDLIVVDNPWMDDFAAAGFLEPLNDRISSTPDYQPDDFFPSLTDITDV
DGTTYGVPFYNYALGYIYNKPDLQAANLQVPTDLDALVSTSQRLKAGDRAGIAMQPQRGYKIFEEWANWLFAAGGSIYDA
DGKPTLNTEQAARALDAYIETYRTAAPANSLNWGFDEAFRSVSGGNAASMIGYNWNLPALNDPAGASGARAGQFALAPIP
GGKSALGLWSWAIPANSAAPDAAWAFTSWITSPAVDAQRVAEGGAVTRKGSLTDPKVLADGYGEEYYRVVGEILADAAPL
SQGRGGEEMIQAVGTELNDAAAGNKSVADALRDAQAAAERIQQ
>Mature_443_residues
MKIPKLGRRPARRKATRWMPALAMTAGLALAGCAGSGGSGDEQSSSGLGDIPTDTNATVRVLMENVPDTDIVQGMVGQFN
EKYPDIKVQIETMTFDQMRDRLVSSFQSAEPAYDLIVVDNPWMDDFAAAGFLEPLNDRISSTPDYQPDDFFPSLTDITDV
DGTTYGVPFYNYALGYIYNKPDLQAANLQVPTDLDALVSTSQRLKAGDRAGIAMQPQRGYKIFEEWANWLFAAGGSIYDA
DGKPTLNTEQAARALDAYIETYRTAAPANSLNWGFDEAFRSVSGGNAASMIGYNWNLPALNDPAGASGARAGQFALAPIP
GGKSALGLWSWAIPANSAAPDAAWAFTSWITSPAVDAQRVAEGGAVTRKGSLTDPKVLADGYGEEYYRVVGEILADAAPL
SQGRGGEEMIQAVGTELNDAAAGNKSVADALRDAQAAAERIQQ

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47222; Mature: 47222

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIPKLGRRPARRKATRWMPALAMTAGLALAGCAGSGGSGDEQSSSGLGDIPTDTNATVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
VLMENVPDTDIVQGMVGQFNEKYPDIKVQIETMTFDQMRDRLVSSFQSAEPAYDLIVVDN
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECC
PWMDDFAAAGFLEPLNDRISSTPDYQPDDFFPSLTDITDVDGTTYGVPFYNYALGYIYNK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHEECC
PDLQAANLQVPTDLDALVSTSQRLKAGDRAGIAMQPQRGYKIFEEWANWLFAAGGSIYDA
CCCCCCCEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEC
DGKPTLNTEQAARALDAYIETYRTAAPANSLNWGFDEAFRSVSGGNAASMIGYNWNLPAL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCC
NDPAGASGARAGQFALAPIPGGKSALGLWSWAIPANSAAPDAAWAFTSWITSPAVDAQRV
CCCCCCCCCCCCCEEEEECCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AEGGAVTRKGSLTDPKVLADGYGEEYYRVVGEILADAAPLSQGRGGEEMIQAVGTELNDA
HCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHH
AAGNKSVADALRDAQAAAERIQQ
CCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIPKLGRRPARRKATRWMPALAMTAGLALAGCAGSGGSGDEQSSSGLGDIPTDTNATVR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCHHHH
VLMENVPDTDIVQGMVGQFNEKYPDIKVQIETMTFDQMRDRLVSSFQSAEPAYDLIVVDN
HHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECC
PWMDDFAAAGFLEPLNDRISSTPDYQPDDFFPSLTDITDVDGTTYGVPFYNYALGYIYNK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCHHHHHHHHEECC
PDLQAANLQVPTDLDALVSTSQRLKAGDRAGIAMQPQRGYKIFEEWANWLFAAGGSIYDA
CCCCCCCEECCCCHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCEEEC
DGKPTLNTEQAARALDAYIETYRTAAPANSLNWGFDEAFRSVSGGNAASMIGYNWNLPAL
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCC
NDPAGASGARAGQFALAPIPGGKSALGLWSWAIPANSAAPDAAWAFTSWITSPAVDAQRV
CCCCCCCCCCCCCEEEEECCCCCCHHHEEEECCCCCCCCCCHHHHHHHHHCCCCCCHHHH
AEGGAVTRKGSLTDPKVLADGYGEEYYRVVGEILADAAPLSQGRGGEEMIQAVGTELNDA
HCCCCEECCCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCHHHH
AAGNKSVADALRDAQAAAERIQQ
CCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]