| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is yebQ [C]
Identifier: 119868470
GI number: 119868470
Start: 2553604
End: 2555271
Strand: Reverse
Name: yebQ [C]
Synonym: Mkms_2434
Alternate gene names: 119868470
Gene position: 2555271-2553604 (Counterclockwise)
Preceding gene: 119868471
Following gene: 119868460
Centisome position: 44.54
GC content: 69.48
Gene sequence:
>1668_bases ATGCAGCCCACCGAGGTCGGGCCGGCCATCGCACCGGCGAACAGCCGAAGCCGTCGGATCGCGATCAGCGCGGGCAGTCT CGCGGTCCTGCTCGGCGCGCTCGACACCTATGTCGTCATCGCGATCATCCGCGACATCATGTTCGACATCGGGATCGCGA TAAACCAGATCCAACGCGTCACGCCGATCATCACCGGGTACCTGCTCGGCTACATCGCCGCGATGCCGCTGCTGGGCCGG GCGTCCGACCGGTTCGGACGCAAGCTGGTGCTGCAGCTCAGCCTGGCCGGCTTCGCGATCGGGTCGGTGGTCACGGCGTT GTCGAATGACCTGACACCCATGGTGATCGGCCGCTTCATCCAGGGTGTGGCCAGCGGCGCACTGCTGCCGGTCACCCTGG CACTGGCCGCCGACCTGTGGGCGACCCGCAACCGCGCCTCGGTGCTCGGCGGGATCGGCGCGGCGCAGGAACTGGGCAGC GTGCTGGGCCCGCTCTACGGAATCGCCGTGGTGGCCGCGCTGAGCACCTGGCGTGACGTGTTCTGGATCAACGTGCCGCT CGCGGCGATCGCGATGGTGCTGATCCACTTCAGCCTGCCTGCCCGTCTCAAACCGGAGCGACCGGAGAAGGTCGACGTGG TCGGCGGCGTCCTGCTGGCGATTGCGCTCGGCCTGTCGGTGATCGGCCTGTACAACCCGGCCCCCGACGGCAAACAGATC CTGCCCGACTACGGCCCGCCGACGCTGATCGGCGCCGTCGCCGCGTTCGTGGCCTTCTTCGTGTGGGAGCGATTCGCCCG CACCCGTCTGATCGAACCGGCCGGTGTGCACTTCCGGCCGTTCCTGGCGGCGTTGGGCGCGTCGCTCTGCGCGGGTGCGG CGCTGATGGTCACGCTGGTCAACGTCGAACTCTTCGGCCAGGGCGTGCTCGGCAAGGATCAGACGGAGGCCGTCCTGCTC CTGCTTCGGTTCCTGATCGCCCTGCCGATCGGAGCGCTGCTCGGTGGCTGGCTGGCCAGCCGCATCGGTGACCGGCTGGT GGCGTTCGCCGGCCTGATGATCGCCGCGGGCGGATACCTGTTGATCTCGAAGTGGCCGGTCGACCTGCTCTCGGCCCGTC ACGATCTCGGGTTCGTCACCCTGCCGGTCCTCGACACCGACCTGGTGATCGCCGGGATCGGCCTCGGCCTGGTGATCGGT CCGCTGACGTCGGCGTCGCTGCGGGTGGTGCCCGCCGCACAGCACGGCATCGCGTCGGCCGCGGTGGTGGTGTCCCGGAT GATCGGCATGCTGATCGGGCTGGCGGCGCTGTCCGCGTGGGGGCTGTACCGGCTCAACCAGCACCTGCAGACGCTGCCGT TCCCGCCCGGGGCCGACACGCTGGCCGAGCGGTTGGCCGCCGAGGCGGACCGCTACCGCGCGGCGTACGTGCTGCAGTAC GGCGACATCTTCATCGTCACCACGATCATCTGTGTGGTCGGCGCACTGCTCGGGCTGCTGATCAGCGGCAGGAACGAGCA TGCGGACGAGTCCCCGGTGCCCGTGGGTGCCGATCACGGGGACGATGCGCCCACCCAGTTCATCAACGTGGCAGGCGCCT CGGGAGACGCCGATCAGACCACGCGCCTACCGCGGCAGACACCGGGCAGGCACCGCGACGAAGCCTGA
Upstream 100 bases:
>100_bases ACCTGGCGCAGGTCAAGTTGGAGCCCAGCGCGGGCAACAGCGTCACGATGACGCTGTCGGACTGGGGTAAGCAGGTCACC GTCACAAAGCCGGCGGTGTG
Downstream 100 bases:
>100_bases GTCAGCAGCGCTCGATACCGGGCCGGAGCAGGCGGTGGCCCTCCCGGGCGTCGGGACGGCCGGGGAGCACGCCGCGCAGC GGACCCCAGACGAGCGACCC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 555
Protein sequence:
>555_residues MQPTEVGPAIAPANSRSRRIAISAGSLAVLLGALDTYVVIAIIRDIMFDIGIAINQIQRVTPIITGYLLGYIAAMPLLGR ASDRFGRKLVLQLSLAGFAIGSVVTALSNDLTPMVIGRFIQGVASGALLPVTLALAADLWATRNRASVLGGIGAAQELGS VLGPLYGIAVVAALSTWRDVFWINVPLAAIAMVLIHFSLPARLKPERPEKVDVVGGVLLAIALGLSVIGLYNPAPDGKQI LPDYGPPTLIGAVAAFVAFFVWERFARTRLIEPAGVHFRPFLAALGASLCAGAALMVTLVNVELFGQGVLGKDQTEAVLL LLRFLIALPIGALLGGWLASRIGDRLVAFAGLMIAAGGYLLISKWPVDLLSARHDLGFVTLPVLDTDLVIAGIGLGLVIG PLTSASLRVVPAAQHGIASAAVVVSRMIGMLIGLAALSAWGLYRLNQHLQTLPFPPGADTLAERLAAEADRYRAAYVLQY GDIFIVTTIICVVGALLGLLISGRNEHADESPVPVGADHGDDAPTQFINVAGASGDADQTTRLPRQTPGRHRDEA
Sequences:
>Translated_555_residues MQPTEVGPAIAPANSRSRRIAISAGSLAVLLGALDTYVVIAIIRDIMFDIGIAINQIQRVTPIITGYLLGYIAAMPLLGR ASDRFGRKLVLQLSLAGFAIGSVVTALSNDLTPMVIGRFIQGVASGALLPVTLALAADLWATRNRASVLGGIGAAQELGS VLGPLYGIAVVAALSTWRDVFWINVPLAAIAMVLIHFSLPARLKPERPEKVDVVGGVLLAIALGLSVIGLYNPAPDGKQI LPDYGPPTLIGAVAAFVAFFVWERFARTRLIEPAGVHFRPFLAALGASLCAGAALMVTLVNVELFGQGVLGKDQTEAVLL LLRFLIALPIGALLGGWLASRIGDRLVAFAGLMIAAGGYLLISKWPVDLLSARHDLGFVTLPVLDTDLVIAGIGLGLVIG PLTSASLRVVPAAQHGIASAAVVVSRMIGMLIGLAALSAWGLYRLNQHLQTLPFPPGADTLAERLAAEADRYRAAYVLQY GDIFIVTTIICVVGALLGLLISGRNEHADESPVPVGADHGDDAPTQFINVAGASGDADQTTRLPRQTPGRHRDEA >Mature_555_residues MQPTEVGPAIAPANSRSRRIAISAGSLAVLLGALDTYVVIAIIRDIMFDIGIAINQIQRVTPIITGYLLGYIAAMPLLGR ASDRFGRKLVLQLSLAGFAIGSVVTALSNDLTPMVIGRFIQGVASGALLPVTLALAADLWATRNRASVLGGIGAAQELGS VLGPLYGIAVVAALSTWRDVFWINVPLAAIAMVLIHFSLPARLKPERPEKVDVVGGVLLAIALGLSVIGLYNPAPDGKQI LPDYGPPTLIGAVAAFVAFFVWERFARTRLIEPAGVHFRPFLAALGASLCAGAALMVTLVNVELFGQGVLGKDQTEAVLL LLRFLIALPIGALLGGWLASRIGDRLVAFAGLMIAAGGYLLISKWPVDLLSARHDLGFVTLPVLDTDLVIAGIGLGLVIG PLTSASLRVVPAAQHGIASAAVVVSRMIGMLIGLAALSAWGLYRLNQHLQTLPFPPGADTLAERLAAEADRYRAAYVLQY GDIFIVTTIICVVGALLGLLISGRNEHADESPVPVGADHGDDAPTQFINVAGASGDADQTTRLPRQTPGRHRDEA
Specific function: Confers resistance to tetracycline and aminoglycosides such as streptomycin and gentamicin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081983, Length=372, Percent_Identity=25, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789042, Length=458, Percent_Identity=24.6724890829694, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1790195, Length=162, Percent_Identity=28.3950617283951, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1788710, Length=440, Percent_Identity=23.4090909090909, Blast_Score=65, Evalue=8e-12, Organism=Escherichia coli, GI1790146, Length=146, Percent_Identity=31.5068493150685, Blast_Score=64, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6325455, Length=177, Percent_Identity=26.5536723163842, Blast_Score=71, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6323735, Length=346, Percent_Identity=23.6994219653179, Blast_Score=70, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6319770, Length=413, Percent_Identity=24.2130750605327, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 58078; Mature: 58078
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPTEVGPAIAPANSRSRRIAISAGSLAVLLGALDTYVVIAIIRDIMFDIGIAINQIQRV CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPIITGYLLGYIAAMPLLGRASDRFGRKLVLQLSLAGFAIGSVVTALSNDLTPMVIGRFI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QGVASGALLPVTLALAADLWATRNRASVLGGIGAAQELGSVLGPLYGIAVVAALSTWRDV HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FWINVPLAAIAMVLIHFSLPARLKPERPEKVDVVGGVLLAIALGLSVIGLYNPAPDGKQI EEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LPDYGPPTLIGAVAAFVAFFVWERFARTRLIEPAGVHFRPFLAALGASLCAGAALMVTLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NVELFGQGVLGKDQTEAVLLLLRFLIALPIGALLGGWLASRIGDRLVAFAGLMIAAGGYL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LISKWPVDLLSARHDLGFVTLPVLDTDLVIAGIGLGLVIGPLTSASLRVVPAAQHGIASA EEECCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH AVVVSRMIGMLIGLAALSAWGLYRLNQHLQTLPFPPGADTLAERLAAEADRYRAAYVLQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEC GDIFIVTTIICVVGALLGLLISGRNEHADESPVPVGADHGDDAPTQFINVAGASGDADQT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH TRLPRQTPGRHRDEA HCCCCCCCCCCCCCC >Mature Secondary Structure MQPTEVGPAIAPANSRSRRIAISAGSLAVLLGALDTYVVIAIIRDIMFDIGIAINQIQRV CCCCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPIITGYLLGYIAAMPLLGRASDRFGRKLVLQLSLAGFAIGSVVTALSNDLTPMVIGRFI HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH QGVASGALLPVTLALAADLWATRNRASVLGGIGAAQELGSVLGPLYGIAVVAALSTWRDV HHHHCCCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FWINVPLAAIAMVLIHFSLPARLKPERPEKVDVVGGVLLAIALGLSVIGLYNPAPDGKQI EEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LPDYGPPTLIGAVAAFVAFFVWERFARTRLIEPAGVHFRPFLAALGASLCAGAALMVTLV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH NVELFGQGVLGKDQTEAVLLLLRFLIALPIGALLGGWLASRIGDRLVAFAGLMIAAGGYL HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE LISKWPVDLLSARHDLGFVTLPVLDTDLVIAGIGLGLVIGPLTSASLRVVPAAQHGIASA EEECCCHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHH AVVVSRMIGMLIGLAALSAWGLYRLNQHLQTLPFPPGADTLAERLAAEADRYRAAYVLQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEEEEC GDIFIVTTIICVVGALLGLLISGRNEHADESPVPVGADHGDDAPTQFINVAGASGDADQT CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCHHH TRLPRQTPGRHRDEA HCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]