| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867999
Identifier: 119867999
GI number: 119867999
Start: 2079499
End: 2080737
Strand: Reverse
Name: 119867999
Synonym: Mkms_1962
Alternate gene names: NA
Gene position: 2080737-2079499 (Counterclockwise)
Preceding gene: 119868003
Following gene: 119867997
Centisome position: 36.27
GC content: 71.11
Gene sequence:
>1239_bases ATGAGACGATGGTTCAAACATATGAGACATCCGTGTCACCATGGAGCCATGACCGCTCCGTCGATCGGCACCGTGCGCCG TTGGTCGATGCTGGTGCTGGGCGTGATGTCCACGATGTGCGCGAACGTCTTCATCTACGGTGCGGCGTTCCTCATCCCGA CCCTGCACACCGAGCGCGGTCTCGATCTCGCACTGGCCGGCCTGATGGCGTCGATGCCGAGCTTCGGCATGGTGGTCACG CTGATCGCGTGGGGCTACGTCGTCGACCGGGTCGGCGAGCGTTTCGTGCTGACGGTCGGTTCGGCGCTCACCGCGGCGGC CGCCTTTGCGGCCGCGGCGGTGGATTCCCTTCCGGCCGTGGGTGCCCTGCTGTTTCTCGGCGGAATGGCCGCCGCGGGCA GCAATTCCGCGAGCGGGCGCCTGGTCGTCGGATGGTTCGCACCACACCAGCGCGGTCTGGTGATGGGGATCCGGCAGGCG TCGGTTCCGCTCGGAGTCGGACTGGGGGCCTTGGTGATCCCCCGGGTCGCCCAGAGCCAGGGCGTCGCGGCGGCCCTGTT GTTCCCGGCAGCCGTGTGCGCGGCGGCCGCGGTCCTCTGCTTGGTGGGTGTGCTCGATCCGCCGCGCCCACCGCGTGCGG AGGCCGCCGCGGAGGTGCTGGCCAACCCGTACCGGGGCGATGCGGTGCTGTGGCGCATCCATGCCCTGTCCGTCCTGCTC GTCGTGCCGCAGGCGGTGGTGTGGACGTTCACGCTCGTGTGGTTGATGTCCGAGCGGGGATGGTCGGCGGCGTCCGCGGG CGCGCTGGTGACGCTCGCCCAGGTGCTCGGCGCGGGTGGCCGGATCGGCGCCGGCTACCTTTCCGACCGCGTCGGTGACC GGTTGCGGCCCATTCGGTGGATCGCCTCGGCCGCGGCCGCGGTCCTGGCCCTGGTCGCGCTCACCGACGCGCTGGACTCC CCGCTGAGTGTCGCGCTGATGGTGGCGGCATCGGTGATCACGGTCTCCGACAACGGTTTGGCGTTCACCGCCATCGCCGA GATCGCGGGGCCGTTCTGGAGCGGACGGGCCCTGGGCGCGCAGAACACCAGCCAACACCTCGCCTCGGCGGCTTCGGCGC CGGTCTTCGGCGGGCTGATCGGGGTGTTCGGATACCCCGCGGCGTTCGCGGTCCTGGCGGTGCTGCCGCTGCTGGCGCTA CCCCTGGTGCCGGTGCACGCCCGGGTCGGGCGGCACTGA
Upstream 100 bases:
>100_bases GGGGCCGGCATGGTCAGAGCGCCCACCAGCAGTGCCACTGCGCCAACAGTTCTCAACGTCACGCCGACACGGTACGCACC GAATCGCCGTTGTCCACATC
Downstream 100 bases:
>100_bases CTCACTCGCCCTCGAGGTTTGCGGCGCACGCCGCGAGGAGGCCACTCAGCCTGCGAGATTCGGCGCTGCTCAGCCCGGTC AGCATCTGTGCCTCGACCGC
Product: major facilitator superfamily transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRRWFKHMRHPCHHGAMTAPSIGTVRRWSMLVLGVMSTMCANVFIYGAAFLIPTLHTERGLDLALAGLMASMPSFGMVVT LIAWGYVVDRVGERFVLTVGSALTAAAAFAAAAVDSLPAVGALLFLGGMAAAGSNSASGRLVVGWFAPHQRGLVMGIRQA SVPLGVGLGALVIPRVAQSQGVAAALLFPAAVCAAAAVLCLVGVLDPPRPPRAEAAAEVLANPYRGDAVLWRIHALSVLL VVPQAVVWTFTLVWLMSERGWSAASAGALVTLAQVLGAGGRIGAGYLSDRVGDRLRPIRWIASAAAAVLALVALTDALDS PLSVALMVAASVITVSDNGLAFTAIAEIAGPFWSGRALGAQNTSQHLASAASAPVFGGLIGVFGYPAAFAVLAVLPLLAL PLVPVHARVGRH
Sequences:
>Translated_412_residues MRRWFKHMRHPCHHGAMTAPSIGTVRRWSMLVLGVMSTMCANVFIYGAAFLIPTLHTERGLDLALAGLMASMPSFGMVVT LIAWGYVVDRVGERFVLTVGSALTAAAAFAAAAVDSLPAVGALLFLGGMAAAGSNSASGRLVVGWFAPHQRGLVMGIRQA SVPLGVGLGALVIPRVAQSQGVAAALLFPAAVCAAAAVLCLVGVLDPPRPPRAEAAAEVLANPYRGDAVLWRIHALSVLL VVPQAVVWTFTLVWLMSERGWSAASAGALVTLAQVLGAGGRIGAGYLSDRVGDRLRPIRWIASAAAAVLALVALTDALDS PLSVALMVAASVITVSDNGLAFTAIAEIAGPFWSGRALGAQNTSQHLASAASAPVFGGLIGVFGYPAAFAVLAVLPLLAL PLVPVHARVGRH >Mature_412_residues MRRWFKHMRHPCHHGAMTAPSIGTVRRWSMLVLGVMSTMCANVFIYGAAFLIPTLHTERGLDLALAGLMASMPSFGMVVT LIAWGYVVDRVGERFVLTVGSALTAAAAFAAAAVDSLPAVGALLFLGGMAAAGSNSASGRLVVGWFAPHQRGLVMGIRQA SVPLGVGLGALVIPRVAQSQGVAAALLFPAAVCAAAAVLCLVGVLDPPRPPRAEAAAEVLANPYRGDAVLWRIHALSVLL VVPQAVVWTFTLVWLMSERGWSAASAGALVTLAQVLGAGGRIGAGYLSDRVGDRLRPIRWIASAAAAVLALVALTDALDS PLSVALMVAASVITVSDNGLAFTAIAEIAGPFWSGRALGAQNTSQHLASAASAPVFGGLIGVFGYPAAFAVLAVLPLLAL PLVPVHARVGRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI256219543, Length=260, Percent_Identity=25.7692307692308, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI256219598, Length=260, Percent_Identity=25.7692307692308, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4503847, Length=260, Percent_Identity=25.7692307692308, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI256219483, Length=260, Percent_Identity=25.7692307692308, Blast_Score=77, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 42355; Mature: 42355
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWFKHMRHPCHHGAMTAPSIGTVRRWSMLVLGVMSTMCANVFIYGAAFLIPTLHTERG CCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDLALAGLMASMPSFGMVVTLIAWGYVVDRVGERFVLTVGSALTAAAAFAAAAVDSLPAV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH GALLFLGGMAAAGSNSASGRLVVGWFAPHQRGLVMGIRQASVPLGVGLGALVIPRVAQSQ HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHC GVAAALLFPAAVCAAAAVLCLVGVLDPPRPPRAEAAAEVLANPYRGDAVLWRIHALSVLL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VVPQAVVWTFTLVWLMSERGWSAASAGALVTLAQVLGAGGRIGAGYLSDRVGDRLRPIRW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IASAAAAVLALVALTDALDSPLSVALMVAASVITVSDNGLAFTAIAEIAGPFWSGRALGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCEEHHHHHHHHCCCCCCCCCCC QNTSQHLASAASAPVFGGLIGVFGYPAAFAVLAVLPLLALPLVPVHARVGRH CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC >Mature Secondary Structure MRRWFKHMRHPCHHGAMTAPSIGTVRRWSMLVLGVMSTMCANVFIYGAAFLIPTLHTERG CCHHHHHHCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LDLALAGLMASMPSFGMVVTLIAWGYVVDRVGERFVLTVGSALTAAAAFAAAAVDSLPAV HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHH GALLFLGGMAAAGSNSASGRLVVGWFAPHQRGLVMGIRQASVPLGVGLGALVIPRVAQSQ HHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEHHHHCCCCCCCHHHHHHHHHHHHC GVAAALLFPAAVCAAAAVLCLVGVLDPPRPPRAEAAAEVLANPYRGDAVLWRIHALSVLL CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHH VVPQAVVWTFTLVWLMSERGWSAASAGALVTLAQVLGAGGRIGAGYLSDRVGDRLRPIRW HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH IASAAAAVLALVALTDALDSPLSVALMVAASVITVSDNGLAFTAIAEIAGPFWSGRALGA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCEEHHHHHHHHCCCCCCCCCCC QNTSQHLASAASAPVFGGLIGVFGYPAAFAVLAVLPLLALPLVPVHARVGRH CCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]