| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867960
Identifier: 119867960
GI number: 119867960
Start: 2041184
End: 2041822
Strand: Reverse
Name: 119867960
Synonym: Mkms_1923
Alternate gene names: NA
Gene position: 2041822-2041184 (Counterclockwise)
Preceding gene: 119867962
Following gene: 119867952
Centisome position: 35.59
GC content: 67.92
Gene sequence:
>639_bases ATGACCGCACAGGCCACTGCGCTGATGGTGTCGGTCGCGGCCGTGCTCACCGCCGGATGTGTGTCGGTGGTCGGCGGCAC CGCGGTCCGCTCGACGCCGGGCCTCGACGACGACTCCCGCTCCCCCGTCGATGTCGACACCGTGCTGCTCGAGACGGCGC AGATGCAGGCGATCACCGGGGCGGGCGAGGATCTCACGATCATCCCGACCATGGACGGCAAGATCCCGGTCGACATCGAA CCCCTGATGGAACAGATGCCGACGCCCTGCCAGTGGCTGTTCGCCGAATCGCAGACGTTCGGTGACGAGGTCGAGGAGTT CCACAAGACGACGTTCCAGAACCCGCCCGACGGCGGCCTGATCTCCCAAGGCGCGGCCGGCTACCGCGATCCCGAGACGG CACGGCGGGCGTTCGACGGTGTGGTGGCCCTCGTCGACGGCTGTGGCACAACGAATTACGGTCCCGCGTACATCGGCGAG TGGACCGCCACGGCGGATGCGGTGCAGACCCGGCCGGGCGACTGCGGGCGGGACTACAGGCTGAAGTCGACGGTGCTGGT CGAGGTGACGTTCTGCGCGTTCACCGAGGCGGTGCCCGACATCGTGATGACGAACATCCTTGCGAAGGTGCCGGGTTAG
Upstream 100 bases:
>100_bases GGCTCCGGGCCAGGATCCGATGCCGGTCGCGGCGGCGTAGACAGTCACCCGGTGCACAGTATTCGACGCGGTTAGGCTCG TCCTCGGGAAGGGGACGGCG
Downstream 100 bases:
>100_bases TTGTGCCGCTCTCGCGTGAAATAGCATTCCCTGTCGTCAAGGCGACGCTTTGACAGCAGGGAATGCTGTTTCGCGAATGA CTACCGCCCGTCAGCCCCGC
Product: protein LpqA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MTAQATALMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITGAGEDLTIIPTMDGKIPVDIE PLMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGLISQGAAGYRDPETARRAFDGVVALVDGCGTTNYGPAYIGE WTATADAVQTRPGDCGRDYRLKSTVLVEVTFCAFTEAVPDIVMTNILAKVPG
Sequences:
>Translated_212_residues MTAQATALMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITGAGEDLTIIPTMDGKIPVDIE PLMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGLISQGAAGYRDPETARRAFDGVVALVDGCGTTNYGPAYIGE WTATADAVQTRPGDCGRDYRLKSTVLVEVTFCAFTEAVPDIVMTNILAKVPG >Mature_211_residues TAQATALMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITGAGEDLTIIPTMDGKIPVDIEP LMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGLISQGAAGYRDPETARRAFDGVVALVDGCGTTNYGPAYIGEW TATADAVQTRPGDCGRDYRLKSTVLVEVTFCAFTEAVPDIVMTNILAKVPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22337; Mature: 22206
Theoretical pI: Translated: 3.91; Mature: 3.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQATALMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITG CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC AGEDLTIIPTMDGKIPVDIEPLMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGL CCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC ISQGAAGYRDPETARRAFDGVVALVDGCGTTNYGPAYIGEWTATADAVQTRPGDCGRDYR CCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCE LKSTVLVEVTFCAFTEAVPDIVMTNILAKVPG ECCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TAQATALMVSVAAVLTAGCVSVVGGTAVRSTPGLDDDSRSPVDVDTVLLETAQMQAITG CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC AGEDLTIIPTMDGKIPVDIEPLMEQMPTPCQWLFAESQTFGDEVEEFHKTTFQNPPDGGL CCCCEEEEECCCCCCCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCC ISQGAAGYRDPETARRAFDGVVALVDGCGTTNYGPAYIGEWTATADAVQTRPGDCGRDYR CCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCE LKSTVLVEVTFCAFTEAVPDIVMTNILAKVPG ECCEEEEEEHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA