| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is rrmA [C]
Identifier: 119867952
GI number: 119867952
Start: 2033257
End: 2034036
Strand: Reverse
Name: rrmA [C]
Synonym: Mkms_1915
Alternate gene names: 119867952
Gene position: 2034036-2033257 (Counterclockwise)
Preceding gene: 119867960
Following gene: 119867951
Centisome position: 35.45
GC content: 68.97
Gene sequence:
>780_bases ATGAGCGCATTCGTTACCGGGCCGCGTGGGGGCGGCGACGAGACCCTCCCCCTCACCGGCGAGCGGACGATCCCCGGGCT GGCGGAGGAGAACTACTGGTTCCGCCGCCACGAGGTCGTCTACGCCCGCCTCGCGGACCAGTGCGCCGGCCGCGACGTGC TCGAGGCCGGATGCGGTGAGGGCTACGGGGCGGATCTGATCGCCGGGGTCGCACGACGGGTGATCGCGCTGGACTACGAC GAGGCGACCGTCGCGCACGTGCGCGCCCGCTACCCGCGGGTGGAGATCCACCACGGCAACCTCGCCGCTTTGCCACTGGT CGACTCGTCGGTCGACGTGGTGGTGAATTTCCAGGTGATCGAACATTTGTGGGATCAGCCACAATTCGTCGGCGAATGCC TGCGGGTGCTGCGGCCCGGGGGGTTGCTGCTGATGTCGACCCCGAACCGGATCACCTTCTCCCCCGGCCGGGACACCCCG GTCAACCCGTTCCACACCCGCGAACTCAACGCGGCCGAACTGACCGAATTGCTCACCACGGCCGGATTCGAGATGGAAGC GATGCTCGGGGTCTATCACGGGCCACGCCTGCGTGAACTGGACGCCCGCCACGGCGGGTCCATCATCGACGCGCAGATCG CCCGCGCGGTGGCCGATGCGCCGTGGCCGCAGGACCTCCTCGACGACGTCGCCGCGGTGCGCATCGACGACTTCGACCTG ACCTCCGGAGAAGACATCGACGACAGCCTCGACCTGGTCGCGATCGCGGTGCGACCGTGA
Upstream 100 bases:
>100_bases AACACCATAGCTGGTCGAAGTTCATGCGCCCGCCTCCCCTACCACCGTGAACCGTTCACGAACCGGCCACGACGGCGTCG CCTGGGTTAGCCTGCCTGCG
Downstream 100 bases:
>100_bases GCGACGACGCTCGGGTACCGGGGCTGTTCACCCTCGTCCTGCACACGCATCTGCCGTGGCTGGCGCACCACGGCCGCTGG CCGGTCGGCGAGGAGTGGCT
Product: type 11 methyltransferase
Products: S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSAFVTGPRGGGDETLPLTGERTIPGLAEENYWFRRHEVVYARLADQCAGRDVLEAGCGEGYGADLIAGVARRVIALDYD EATVAHVRARYPRVEIHHGNLAALPLVDSSVDVVVNFQVIEHLWDQPQFVGECLRVLRPGGLLLMSTPNRITFSPGRDTP VNPFHTRELNAAELTELLTTAGFEMEAMLGVYHGPRLRELDARHGGSIIDAQIARAVADAPWPQDLLDDVAAVRIDDFDL TSGEDIDDSLDLVAIAVRP
Sequences:
>Translated_259_residues MSAFVTGPRGGGDETLPLTGERTIPGLAEENYWFRRHEVVYARLADQCAGRDVLEAGCGEGYGADLIAGVARRVIALDYD EATVAHVRARYPRVEIHHGNLAALPLVDSSVDVVVNFQVIEHLWDQPQFVGECLRVLRPGGLLLMSTPNRITFSPGRDTP VNPFHTRELNAAELTELLTTAGFEMEAMLGVYHGPRLRELDARHGGSIIDAQIARAVADAPWPQDLLDDVAAVRIDDFDL TSGEDIDDSLDLVAIAVRP >Mature_258_residues SAFVTGPRGGGDETLPLTGERTIPGLAEENYWFRRHEVVYARLADQCAGRDVLEAGCGEGYGADLIAGVARRVIALDYDE ATVAHVRARYPRVEIHHGNLAALPLVDSSVDVVVNFQVIEHLWDQPQFVGECLRVLRPGGLLLMSTPNRITFSPGRDTPV NPFHTRELNAAELTELLTTAGFEMEAMLGVYHGPRLRELDARHGGSIIDAQIARAVADAPWPQDLLDDVAAVRIDDFDLT SGEDIDDSLDLVAIAVRP
Specific function: Specifically Methylates The Guanosine In Position 745 Of 23s rRNA. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methyltransferase superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR005149 - InterPro: IPR011991 [H]
Pfam domain/function: PF08241 Methyltransf_11; PF03551 PadR [H]
EC number: 2.1.1.51 [C]
Molecular weight: Translated: 28272; Mature: 28141
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFVTGPRGGGDETLPLTGERTIPGLAEENYWFRRHEVVYARLADQCAGRDVLEAGCGE CCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC GYGADLIAGVARRVIALDYDEATVAHVRARYPRVEIHHGNLAALPLVDSSVDVVVNFQVI CCCHHHHHHHHHHHEEECCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCEEEEEHHHH EHLWDQPQFVGECLRVLRPGGLLLMSTPNRITFSPGRDTPVNPFHTRELNAAELTELLTT HHHHCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH AGFEMEAMLGVYHGPRLRELDARHGGSIIDAQIARAVADAPWPQDLLDDVAAVRIDDFDL CCCCHHHHHHHHCCCCHHEHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCC TSGEDIDDSLDLVAIAVRP CCCCCCCCCCEEEEEEECC >Mature Secondary Structure SAFVTGPRGGGDETLPLTGERTIPGLAEENYWFRRHEVVYARLADQCAGRDVLEAGCGE CCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCC GYGADLIAGVARRVIALDYDEATVAHVRARYPRVEIHHGNLAALPLVDSSVDVVVNFQVI CCCHHHHHHHHHHHEEECCCCHHHHHHHHHCCEEEEECCCEEEEEEECCCCEEEEEHHHH EHLWDQPQFVGECLRVLRPGGLLLMSTPNRITFSPGRDTPVNPFHTRELNAAELTELLTT HHHHCCHHHHHHHHHHHCCCCEEEEECCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHH AGFEMEAMLGVYHGPRLRELDARHGGSIIDAQIARAVADAPWPQDLLDDVAAVRIDDFDL CCCCHHHHHHHHCCCCHHEHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHEEECCCCC TSGEDIDDSLDLVAIAVRP CCCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Unidentified protein factor B [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: S-Adenosyl-L-methionine; rRNA [C]
Specific reaction: S-Adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine +rRNA containing Nmethylguanine [C]
General reaction: Methyl group transfer [C]
Inhibitor: Mg2+; Unidentified protein factor A1 [C]
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155856 [H]