| Definition | Mycobacterium sp. KMS chromosome, complete genome. |
|---|---|
| Accession | NC_008705 |
| Length | 5,737,227 |
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The map label for this gene is 119867951
Identifier: 119867951
GI number: 119867951
Start: 2031695
End: 2033260
Strand: Reverse
Name: 119867951
Synonym: Mkms_1914
Alternate gene names: NA
Gene position: 2033260-2031695 (Counterclockwise)
Preceding gene: 119867952
Following gene: 119867950
Centisome position: 35.44
GC content: 72.73
Gene sequence:
>1566_bases GTGAGCGACGACGCTCGGGTACCGGGGCTGTTCACCCTCGTCCTGCACACGCATCTGCCGTGGCTGGCGCACCACGGCCG CTGGCCGGTCGGCGAGGAGTGGCTCTACCAGTCGTGGTCGGCGTCGTACCTGCCGCTGATGCGCGTGCTGCGCAGGCTGG CCGGGGAGGGCCGCGACCATCTGCTCACCCTCGGGATGACACCGGTGGTGACCGCTCAGCTCGACGACCCCTACTGCCTG ACCGGGATGCACAGCTGGCTGGCGAACTGGCAGCTGCGGGCACTGGAGGCCGCCACCCTGCGCGCCTCCTCGGACACCAC ACCGGCGTGCACACCGGAAGCGTTGCGCGCCTTCGGTGTTCGCGAGCAGGGCGAAGCGGAGCTGGCGCTCGAGGAGTTCG CCACACTGTGGCGCCACGGCGGCAGTCCGCTGCTGCGTGAGCTCGTCGACGCGGGCACCGTCGAACTGCTGGGCGGGCCG CTGGCGCATCCGTTCCAGCCGTTGCTCAACCCCCGACTGCGGGAGTTCGCGCTGCGCGAAGGGCTCGCCGACGCCGGACA GCGCTTCGCGCACACCCCGCGCGGCATCTGGGCCCCGGAGTGCGCGTACGCCCCGGGCATGGAGGCCGACTATGCCGCGG CGGGCGTCGGCCACTTCATGGTCGACGGCCCGTCGCTGCACGGCGACACCGCGCTAGGCCGCCCCGTCGGCCACTCCGGC GTCGTCGCGTTCGGTCGCGACCTGCAGGTCAGCTACCGCGTGTGGTCGCCCAAGTCCGGCTATCCCGGCCACGCCGCCTA CCGCGACTTCCACACCTACGACCACGTCACCGGGTTGAAGCCGGCGCGGGTCACCGGGCGCAACGTGCCGTCGTCGGCCA AAGCCCCATACGAACCGGACCGCGCCGACGCCGCCATCGACGCCCACGTCGCCGACTTCGTGCAGGTGGTGCGGCGGCGG CTGACGGACGAGAGCGAGCGGATCGGCCGCCCGGCGCACGTGGTCGCCGCCTTCGACACCGAACTGTTCGGCCACTGGTG GTACGAGGGGCCGGAGTGGCTGGCCCGCGTACTGCGGGCGCTGCCGGAAGCCGGTGTGCGGGTGGGCACGCTCAGCGATG CCGTCGACGGCGGATTCGTCGGCGCCCCAGTCGATCTGCCGCCCAGTTCGTGGGGTTCGGGTAAGGACTGGCAGGTCTGG GCCGGAGACCAGGTGACCGACTTCGTCCGACTCAACGCCGAGGTCGTCGACACCGCGCTCAGCACCGTCGACAAGGCGCT CACCCAGCGCGCGTCGGTGGGCAGCCCGACACCGCGGGACACCGTCGCCGACCAGATCCTGCGCGAGACCCTGCTGACCG TCTCGAGCGACTGGCCGTTCATGGTGAGCAAGGACTCCGCGGCCGACTACGCCCGCTACCGCGCCCACCTGCACGCCCAC GCGACCCGCGAGATCGCCGACGCACTCGCGGCCGGCCGGCGGGAGCAGGCCCAGCGCCTCGCCGACGGCTGGAACCGCGC CGACGGCCTGTTCGGCGCCCTCGACGCCCGCCGGTTGCCGCGATGA
Upstream 100 bases:
>100_bases TCCTCGACGACGTCGCCGCGGTGCGCATCGACGACTTCGACCTGACCTCCGGAGAAGACATCGACGACAGCCTCGACCTG GTCGCGATCGCGGTGCGACC
Downstream 100 bases:
>100_bases AAGTTGTTGCGTGAGAATCCTTCTGGTCTCCTGGGAGTACCCACCGGTGGTCATCGGGGGGCTCGGAAGGCATGTGCACC ACCTCGCGACGGCGCTGGCC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Glycosy Hydrolase Family Protein; Alpha-Amylase; (1-_4)-Alpha-D-Glucan Branching; Family; Glycogen Branching; Glycosyl Transferase/Glycoside Hydrolase-Like Protein; Glycosyl Hydrolase Family Protein
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MSDDARVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWSASYLPLMRVLRRLAGEGRDHLLTLGMTPVVTAQLDDPYCL TGMHSWLANWQLRALEAATLRASSDTTPACTPEALRAFGVREQGEAELALEEFATLWRHGGSPLLRELVDAGTVELLGGP LAHPFQPLLNPRLREFALREGLADAGQRFAHTPRGIWAPECAYAPGMEADYAAAGVGHFMVDGPSLHGDTALGRPVGHSG VVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHVTGLKPARVTGRNVPSSAKAPYEPDRADAAIDAHVADFVQVVRRR LTDESERIGRPAHVVAAFDTELFGHWWYEGPEWLARVLRALPEAGVRVGTLSDAVDGGFVGAPVDLPPSSWGSGKDWQVW AGDQVTDFVRLNAEVVDTALSTVDKALTQRASVGSPTPRDTVADQILRETLLTVSSDWPFMVSKDSAADYARYRAHLHAH ATREIADALAAGRREQAQRLADGWNRADGLFGALDARRLPR
Sequences:
>Translated_521_residues MSDDARVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWSASYLPLMRVLRRLAGEGRDHLLTLGMTPVVTAQLDDPYCL TGMHSWLANWQLRALEAATLRASSDTTPACTPEALRAFGVREQGEAELALEEFATLWRHGGSPLLRELVDAGTVELLGGP LAHPFQPLLNPRLREFALREGLADAGQRFAHTPRGIWAPECAYAPGMEADYAAAGVGHFMVDGPSLHGDTALGRPVGHSG VVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHVTGLKPARVTGRNVPSSAKAPYEPDRADAAIDAHVADFVQVVRRR LTDESERIGRPAHVVAAFDTELFGHWWYEGPEWLARVLRALPEAGVRVGTLSDAVDGGFVGAPVDLPPSSWGSGKDWQVW AGDQVTDFVRLNAEVVDTALSTVDKALTQRASVGSPTPRDTVADQILRETLLTVSSDWPFMVSKDSAADYARYRAHLHAH ATREIADALAAGRREQAQRLADGWNRADGLFGALDARRLPR >Mature_520_residues SDDARVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWSASYLPLMRVLRRLAGEGRDHLLTLGMTPVVTAQLDDPYCLT GMHSWLANWQLRALEAATLRASSDTTPACTPEALRAFGVREQGEAELALEEFATLWRHGGSPLLRELVDAGTVELLGGPL AHPFQPLLNPRLREFALREGLADAGQRFAHTPRGIWAPECAYAPGMEADYAAAGVGHFMVDGPSLHGDTALGRPVGHSGV VAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHVTGLKPARVTGRNVPSSAKAPYEPDRADAAIDAHVADFVQVVRRRL TDESERIGRPAHVVAAFDTELFGHWWYEGPEWLARVLRALPEAGVRVGTLSDAVDGGFVGAPVDLPPSSWGSGKDWQVWA GDQVTDFVRLNAEVVDTALSTVDKALTQRASVGSPTPRDTVADQILRETLLTVSSDWPFMVSKDSAADYARYRAHLHAHA TREIADALAAGRREQAQRLADGWNRADGLFGALDARRLPR
Specific function: Unknown
COG id: COG1543
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57096; Mature: 56964
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDDARVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWSASYLPLMRVLRRLAGEGRDH CCCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCE LLTLGMTPVVTAQLDDPYCLTGMHSWLANWQLRALEAATLRASSDTTPACTPEALRAFGV EEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC REQGEAELALEEFATLWRHGGSPLLRELVDAGTVELLGGPLAHPFQPLLNPRLREFALRE CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHCHHHHHHHHHH GLADAGQRFAHTPRGIWAPECAYAPGMEADYAAAGVGHFMVDGPSLHGDTALGRPVGHSG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCC VVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHVTGLKPARVTGRNVPSSAKAPYEPD EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RADAAIDAHVADFVQVVRRRLTDESERIGRPAHVVAAFDTELFGHWWYEGPEWLARVLRA CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHH LPEAGVRVGTLSDAVDGGFVGAPVDLPPSSWGSGKDWQVWAGDQVTDFVRLNAEVVDTAL HHHCCCEEECHHHHCCCCEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH STVDKALTQRASVGSPTPRDTVADQILRETLLTVSSDWPFMVSKDSAADYARYRAHLHAH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH ATREIADALAAGRREQAQRLADGWNRADGLFGALDARRLPR HHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHHHHHHHCCCC >Mature Secondary Structure SDDARVPGLFTLVLHTHLPWLAHHGRWPVGEEWLYQSWSASYLPLMRVLRRLAGEGRDH CCCCCCCHHHHHHHHHHCHHHHHCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCCCE LLTLGMTPVVTAQLDDPYCLTGMHSWLANWQLRALEAATLRASSDTTPACTPEALRAFGV EEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHCC REQGEAELALEEFATLWRHGGSPLLRELVDAGTVELLGGPLAHPFQPLLNPRLREFALRE CCCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHCCCCCCCHHHHHCHHHHHHHHHH GLADAGQRFAHTPRGIWAPECAYAPGMEADYAAAGVGHFMVDGPSLHGDTALGRPVGHSG HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCCCCCCC VVAFGRDLQVSYRVWSPKSGYPGHAAYRDFHTYDHVTGLKPARVTGRNVPSSAKAPYEPD EEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC RADAAIDAHVADFVQVVRRRLTDESERIGRPAHVVAAFDTELFGHWWYEGPEWLARVLRA CCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHH LPEAGVRVGTLSDAVDGGFVGAPVDLPPSSWGSGKDWQVWAGDQVTDFVRLNAEVVDTAL HHHCCCEEECHHHHCCCCEECCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHH STVDKALTQRASVGSPTPRDTVADQILRETLLTVSSDWPFMVSKDSAADYARYRAHLHAH HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHH ATREIADALAAGRREQAQRLADGWNRADGLFGALDARRLPR HHHHHHHHHHHCCHHHHHHHHHCCCHHCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA